Lynx rufus (bobcat): 124507113
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Entry
124507113 CDS
T08475
Name
(RefSeq) transcription factor SOX-30-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124507113
Transcription factors [BR:
lruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124507113
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
124507113
NCBI-ProteinID:
XP_046929353
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MERARPEPPLQLHQLPRATPPRPLRPAPPQLPVEGTSFRAAGVDLPASPPTPCAAAITTV
ASSCGEAQSSSVQPAARRLLQVKSEQVLLLPPGPPLPQALEEGVVASPSPARLLQLRPEL
LLLPPPPPASDGAPCRPELHPVQPRALHVKAEKQEPGQGLDPSAGTRRPVEAGHRAPREA
KVEGPGPTLDCRRGGEKKGRLEAEEVMRDAATGGEGKNLVAIREGIIKTEEPERLREDCR
LGTEPASNGLIHGSKEVILGQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIVSTNPTTIYPYRSPTYSVVIPSLQNTITQPVGDA
TPAIQLPTPAVQHPSPISLFQPTVSSTAQVAVQASSLPLRPALPPQRFAGPSQTDTHRLH
SGANRSVKRPTPVSLENTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQASPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESVDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEDEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccagagccgccgcttcagttgcaccaactgccgcgggcgaccccg
ccgcgcccgctccgtcctgctccgcctcagctgccggtggagggcacctcttttagggct
gcaggcgtggatctccctgcgtcgccgcccaccccgtgcgcggccgccattacgaccgtg
gcctcgtcgtgtggggaagcccagtcgtcgagtgtacagcccgcggcacggcgactgctg
caggtcaagtcggaacaggtgttgcttctgccaccagggccaccactgcctcaggccctg
gaagaaggtgtcgttgcttcaccctcgccagcgaggctgctgcagctgaggcccgagctg
ctgctgctgccaccgccgccgcccgcgtccgacggcgccccctgcagacccgagctgcac
ccggtgcagccccgggcgctgcacgtcaaggccgagaagcaggagccagggcagggtttg
gatccgtcggcggggactcgaaggcctgtggaggccggccatagggcccccagggaggcc
aaggtggaaggccccgggccaaccctcgactgccgccgcgggggcgagaagaagggcaga
ttggaagcggaggaggtcatgagggatgcagcgacaggcggggaaggtaaaaacctggtg
gccatcagagaaggcatcatcaaaacggaggaacccgagagactccgcgaggactgcagg
ctgggcactgagcccgcatccaatggcctgatccatggcagcaaggaggtcatcctgggc
cagccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctacac
acagtcccccctggggcccggatccagtttcagggacctccaccttcagagttgatacgg
ttgaccaaggtccccttgacaccagtgcctattaaaatgcaatctttactggagccttct
gtaaaaattgaaactaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggattcaccggccagcattagccaaagctaacccagcagccaacaacgca
gaaatcagtgtccagcttgggttagaatggaacaaacttagcgaagaacaaaagaaaccc
tattatgatgaagcacaaaagattaaagaaaaacacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctttaagtgtttccaatgtattttct
ggtaccacacagaatatcgtgtctacaaatcctacaacaatatatccttatcgctcacct
acctactctgtggtaattcccagcctacagaataccatcactcaaccagttggtgacgcc
acacctgccatccagctgcccacacctgcagtccagcacccaagccccatctcacttttc
cagcccactgtctccagtactgctcaggtggctgtccaggcttcaagtctgcccctccga
ccggcactcccaccccagcgcttcgccgggccctcccagacagacactcatcggctacat
tctggagccaatcgctctgtgaagagacccactcctgtctctctggagaacaccaacagg
attccaacaagtgcaagtactgcccatgccagatttgcaacctcaaccatccagcctccc
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtttaccaggcttctccccttggccatccagccacattgtttggg
acaccaccgcgattctcttttcatcacccttacttcctacctggacctcactacttccca
tcaagcacgtgcccttatagtcggcctccctttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacacgaggctatgttttcagct
ttaaatagagactatccttttagagactacccagatgaacgtacacacagcgaagattct
cggagttgtgagagcgtggatgggacctcttactataacagtcatagccacagtggggaa
gaatacttaaatcctatgcctcagctggacattggagccttggagaacgtcttcacagcc
ccaacgtcaactccctctagcatccagcaagtcaatgtcactgacagtgatgaggaggat
gaagaaaaagtgctcaggaatttataa
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