Lynx rufus (bobcat): 124507136
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Entry
124507136 CDS
T08475
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04110
Cell cycle
lruf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124507136
04114 Oocyte meiosis
124507136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124507136
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lruf00535
]
124507136
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124507136
Meiosis-specific proteins
Cohesin complex and associated proteins
124507136
Proteoglycans [BR:
lruf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
124507136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
124507136
NCBI-ProteinID:
XP_046929383
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaacaggttatcatccagggttttcggagttacagagatcaaacaattgta
gatcccttcagttcaaagcataatgttattgtgggcagaaatggatctggaaaaagtaac
tttttttacgcaattcagtttgttcttagtgatgagttcagtcatcttcgtccggaacag
cgattggctttgttgcatgagggtactggtcctcgtgttatttctgctttcgtggagatt
atttttgataattcggacaaccggttgccaattgataaagaagaagtttcacttcgaaga
gttattggtgccaaaaaggatcagtatttcttagacaagaaaatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttctcgaagcaatccttattatattgtaaaa
caaggaaagatcaaccagatggccacagcaccagattctcagagactaaaactattaaga
gaagtagctggtactagagtgtatgatgaacgaaaagaagaaagcatatctttaatgaaa
gaaacagagggcaaacgcgaaaaaatcaatgagttgttaaaatacattgaagagagatta
cataccttagaagaagaaaaggaagaactggctcaatatcagaagtgggataaaatgaga
cgagccctggaatataccatttacaatcaggaacttaatgagactcgtgctaaacttgat
gagctttctgctaagcgagagactagtggggaaaaatccagacaattaagagatgcccag
caggatgcgagagataaaatggaggatattgaacgtcaagttagagagctgaaaacaaaa
atttcagctatgaaagaagaaaaggagcagctcagcgctgaaagacaagaacaaattaag
cagaggactaagttggagcttaaagccaaggacttacaagatgaattggctggcaatagt
gaacaaaggaaacgcttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagtgtgaaagaaaaagaagagcga
ggaattgctcgattggcccaagctacccaggaaagaacagatctttatgcaaagcaaggt
cgaggaagccagtttacatcaaaagaagaaagggataaatggattaaaaaggaactcaag
tcgttagatcaggctattaatgacaagaaaagacagattgctgctatccataaggatctg
gaagacactgaggcaaataaagagaaaaacctggagcaatacaataaactggatcaggat
cttaatgaagtcaaagctcgagtagaagaactggacagaaaatactatgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattatttgtggagagaggagaatgcagaacag
caagcgcttgctgctaaaagagaagatcttgaaaagaaacagcaacttcttagagcagca
acaggaaaggctattttaaatggaatagacagcataaacaaagtactggaccactttcgt
aggaaaggaataaaccagcatgttcaaaatggctatcacggcattgtgatgaataacttc
gaatgtgagcctgctttctacacatgcgtggaagtcactgcgggcaacaggttattttat
cacattgttgattcggatgaagtcagcacgaagattttgatggagttcaataaaatgaat
cttcctggagaggtcacttttctgcctcttaacaagttagatgtcagggatactgcctat
cctgagaccaatgatgctattcctatgataagtaaactgaggtacaatcccagatttgac
aaagctttcaaacacgtgtttgggaaaacacttatttgtcgtagcatggaagtttcaacc
cagctagcacgtgctttcactatggactgcattaccctggaaggtgaccaagttagtcat
cggggtgctctcactggaggttattatgacacaaggaaatctagacttgaattgcagaaa
gatgttagaaaagcagaagaagaactaggtgagcttgaagcaaagctcaatgaaaacctt
cgcagaaatattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgctcaaagagaagaggcagcagtcagagaaaacctttatgccaaagcaacgtagctta
caaagtttggaggcaagtttgcatgctatggagtccaccagagaatcattgaaagcagaa
ctaggaacggacttgctttctcaacttagtctggaagatcagaagagagtagatgcactc
aatgatgaaattcgtcaacttcagcaggaaaacagacagttgctgaatgaaagaattaaa
ttagaaggtattattactcgagtggagacatacctgaatgagaatttgagaaaacgcttg
gaccaagtggaacaggaacttaatgaactgagagagacagaagggggtactgttctcact
gctacaacttcagaacttgaagcaatcaataaaagagtaaaagatactatggcacgatca
gaagatttggacaattccattgataaaacagaagctggaattaaggagcttcagaagagt
atggaacgctggaaaaatatggaaaaagaacacatggatgctatcaatcatgatactaag
gaactggaaaagatgacaaatcgacaaggcatgctgctgaagaagaaagaagagtgcatg
aagaaaattcgtgaacttgggtcacttccccaggaagcatttgaaaagtaccagacgctg
agcctcaaacagctgtttcgaaaacttgaacagtgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtaaatttctctgagcaaaaagaaaagtta
ataaaacgacaagaagaattggataggggatacaaatcaatcatggaactgatgaatgta
cttgaacttcgaaaatatgaagctattcagttaactttcaaacaggtatctaagaacttc
agtgaagtattccagaagttggtacctggtggcaaagctactttggtgatgaagaaagga
gacgtggagggcagtcagtctcaggatgaaggagaaggaagcggtgaaagtgagaggggt
tctgggtcacaaagcagtgtcccatcagtcgaccagttcactggagttggaattagggta
tcatttacaggaaaacaaggcgaaatgagagaaatgcaacagctttccggtggacagaaa
tccttggtagctcttgctctgatttttgccattcagaaatgtgacccagctcctttttac
ctgtttgatgagattgaccaggctctggatgcccagcacagaaaggctgtgtcagatatg
attatggaacttgccgtacatgcacaatttattacaactacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagtttagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtagaagatgatactactcatggttaa
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