Lynx rufus (bobcat): 124507677
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Entry
124507677 CDS
T08475
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124507677
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124507677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
124507677
NCBI-ProteinID:
XP_046929930
LinkDB
All DBs
Position
Unknown
AA seq
3002 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPPAN
QSQTKLTHFDHYNQYEQQKMHLLDQPNRVMSGAPGNGLASPHSQYHAPPVPQVPHGASGG
GQMGVYPGMQNERHGPPFVDSGSLWGPRAVQVPDQARAPYQQQPQPQQPQPAPSGPPTQG
HPQHMQQMGSYMARGDFSLQQHGQPQQRMSQFSQGQEGLSQGSPFIATSGPGHLAHVPQQ
SPSVAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAGRPQTLNFSSRSQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSGQGL
MHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIP
MDVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSAPRELAGHMRPNGCP
GVGLADPQAIQERLLPGQQHPGQQPSFQQLPTCPPMQPHPGLHHQSSPPHPHHQPWAQLH
PSPQSTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDCLPSVEQQPQQKKKKK
KNNHIVAEDPSKSFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPKE
KKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNKGKTEG
SENSDLDKTPPASPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRD
SPSNTSQSEQQESVDAEGPVVEKIMSSRSIKKQKDSGEEIEVEEFYVKYKNFSYLHCQWA
SVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDERGEPV
THYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSRE
YKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV
IAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAII
TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
EETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA
EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDI
LEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS
MSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIE
SEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQ
TRLYSAVKEDELMEFSDLESDSEEKPCTKPRRPQDRSQGYARSECFRVEKNLLVYGWGRW
TDILSHGRYKRQLTEQDVETICRAILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVN
HSGLSAPVPRGRKGKKVKAQSTHPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVLLR
VRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKH
GYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTR
TPFKDEIDEFANSPPEDKEESMEIRSTGKHSESNAELGQLYWPNTSTLTTRLRRLITAYQ
RSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTF
GVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDEPPDLSS
MIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLL
VGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNLSSLTPLAVGFGQTPAVLPSAH
AQEEKAAGQSEGKAEESGGVSTQEKPEGKEEEEETDGREKDSKQGCEAEASSVKSDLKGM
EVGADTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARD
ETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPPTMDSPLQKRSFAELSMVGQASISGSEDLTTSPQLSKEDALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREAASSTSNFSSL
TSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEG
LDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTEIVKQSGFVPESMFD
RLLTGPVVRGEGASRRGRRPKSEIARAAAAAAAASTSGINPLLVNSLFAGMDLTSLQNLQ
NLQSLQLAGLMGFPPGLATAAAAAGGDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNNPLS
AAAGNAAAAAAAAAAPGQGEPEDGAPKAEEKGNENEDENKDSEKSTDAVSATDSANGSVG
AATAPAGLPSNPLAFNPFLLSTVAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSSE
EKAPDKAEGGAFQEEENLDGSDAEENPEKTAGSSVFEDEGAQGEELDSLDGGDELENNEN
DE
NT seq
9009 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctctttggcgaggacgggaatattttcagcgaaggc
ctcgagggcctcggagagtgtggttaccctgaaaacccagtgaaccccatgggtcagcag
atgccgatagaccagggctttgcctccctgcagccctccctgcaccacccccccgcgaat
cagagtcagaccaagctgacccacttcgaccactataatcagtacgaacagcaaaagatg
catctgctggatcagccaaaccgggtgatgagcggcgcccctgggaacgggctcgcgtcc
cctcactcgcagtaccacgcccctcccgtccctcaggtcccccacggcgccagcggtggc
ggtcagatgggagtctaccccggcatgcagaacgaaaggcacgggccgccgttcgtggac
agcggctccctgtggggcccccgggccgttcaggtgccggaccaggcgcgggccccctac
cagcagcagccccagccgcagcagccccagcccgctccgtcggggccccccacgcagggc
caccctcagcacatgcagcagatgggcagctatatggcacgcggggacttctccctgcag
cagcacggccagccgcagcagaggatgagccagttctcccagggccaggagggcctcagt
cagggaagtcctttcatcgccacctcaggacccggccacttggcccacgtgccccagcag
agccccagcgtggcaccttccttgcgtcattcggtgcagcagttccaccaccacccccct
actgctctccatggagaatccgttgcccacagccccaggttctcccctaatcctcctcaa
caaggggctgggaggccgcagaccctgaacttcagttctcggagccagaccgtcccctca
cctactataaacaactcagggcagtattctcgatatccttacagtaacctaaatcaggga
ttagttaacaatacagggatgaatcagaatttaggccttacaaataatactccaatgaat
cagtccgtaccaagataccccaatgctgtaggattcccatcgaacagtgggcaaggacta
atgcaccagcagcccatccaccccagcggctcacttaaccaaatgaacacacaaactatg
catccttcacagcctcagggaacttacgcctctccacctcccatgtcacccatgaaagca
atgagcaatccggcaggcacaccgcctccgcaagtcaggcccggaagcgctgggatacca
atggacgttggcagttatccaaatatgccccaccctcagccatctcaccagccccccggt
gccatgggaatcggacagaggaatatgggccccagaaacatgcagcagtctcgtccgttt
atgggcatgtcctcagcaccgagggagctggccgggcacatgagaccaaacggctgtccc
ggcgttggccttgcagatccccaagcgatccaggagcgactgctacctggccagcagcac
cccggtcagcagccgtctttccagcagttgccaacctgccctccgatgcagccccacccg
ggcctgcaccaccagtcttcacccccacacccgcaccaccagccttgggcacagctccac
ccgtcaccccagagcaccccgcagaaagtgcctgtgcctcagcattctccgtcggagccc
tttctagagaaaccagtgccggatatgactcaggttagtggaccgaacgctcagctagtg
aagagtgatgattgcctgccatcagtggaacagcaaccgcagcagaagaagaagaaaaag
aaaaacaaccacattgtcgccgaggatcccagtaaaagttttggtaaagatgacttccct
ggtggggttgataaccaagaactaaataggaactcactagatgggtcccaagaagagaag
aagaaaaagaaaaggccgaaggtaaaaaaagatccgaaggaaccgaaagaacccaaggag
aaaaaagagcccaaggaacccaagaccccgaaagcccctaagattcccaaagagccaaag
gaaaagaaagcaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataag
aaacctgattcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaacagaaggt
tctgaaaattcagacttagacaaaacgcccccagcatctcctcctcctgaagaagatgag
gacccaggtgttcagaagcgacgttccagcaggcaggtgaagcggaagcgatacacggaa
gacttggagttcaagatttccgacgaggaagcagatgatgcagatgctgctgggagagac
tccccctccaacacctcgcagtcagagcagcaggaatctgttgatgcagaaggtccagtg
gtagaaaaaatcatgagcagtcgttcaataaaaaaacagaaggactctggagaggagata
gaagttgaggaattctacgtgaaatacaaaaacttctcttatcttcattgtcaatgggca
tctgtagaagatctggagaaagataagagaattcagcaaaagatcaaacgatttaaggca
aagcagggccagaacaaattcctttcagagattgaagatgagctttttaatccagattat
gtggaggttgaccggataatggactttgcacgaagcacagatgaacggggagagcctgtg
actcactacctggtgaagtggtgttccctgccttacgaagacagcacgtgggaactaagg
caggacatagatcaagcaaagatcgaagagtttgagaaactaatgtccagggagccagaa
acagagcgtgtggagcgacctcctgctgatgactggaagaaatcggagagttccagggag
tacaaaaacaataacaaactcagggaataccagttggagggagtaaactggctacttttc
aattggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatc
cagtccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagta
attgccccattgtccacaatccccaactgggaaagggaattccgtacctggacagagttg
aacgtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaaatg
tacttcaaagatccccagggtcgagtgataaaggggtcctataagtttcatgccatcatc
actacatttgagatgattttgacggattgtcctgagctgcggaatattccatggcgctgc
gtcgtcattgatgaagcccacaggctgaagaataggaactgcaagcttctggaggggctc
aagatgatggacttggagcacaaagtgctgctgacggggacccccctacagaacacggtg
gaggaactcttcagcctgcttcatttcttggaaccgagtcgtttcccttcagaaaccacc
ttcatgcaagagtttggcgatctgaaaacagaggaacaggtgcaaaaactccaggctatt
ctaaagccaatgatgttgagacgtctcaaggaggatgtagaaaagaacttggcccccaaa
gaagaaaccattattgaagttgagctcacgaacattcagaagaaatattaccgagccatc
cttgagaagaatttcacatttctctccaaaggtggtggtcaagctaacgtacctaacctt
ttaaacactatgatggagctacggaagtgctgcaatcacccataccttattaacggtgct
gaagagaaaattttggaagagtttaaagaaacacacaatgcagactctccagattttcag
ctccaggcgatgatccaggctgctggcaagctagtgctgattgacaaactactgccaaaa
ctgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacata
ctggaagactacctcattcaaagacggtacccatacgagaggatcgacggcagagtgaga
ggcaacctccgccaggcagctatcgacagattctccaaacccgattctgataggtttgtt
ttcctcctgtgtacacgggcaggaggcttaggcattaatcttactgctgctgatacctgc
atcatcttcgattctgactggaatccccaaaatgatctccaggctcaggctagatgtcat
agaataggacagagcaaatctgtgaaaatctacaggctgatcacaagaaactcttacgaa
agggaaatgtttgacaaggctagtctgaagctcggcctggacaaagctgtgctgcagtcc
atgagtgggagagaaaacgctaccaacggggtccaacaactttccaagaaagaaatagag
gatcttctgcgaaagggggcctacggtgcactcatggatgaggaggatgaagggtctaag
ttctgcgaagaagatattgaccagattctcctgcggcgaacccacactatcaccattgag
tctgaaggcaaaggttccacgtttgctaaggccagttttgttgcatctggaaacaggaca
gacatttccttggatgatccaaatttctggcaaaagtgggctaagaaggctgaattggat
attgatgccttaaacgggaggaacaacctggttattgacactccaagagtgaggaagcaa
accaggctgtacagtgcagtgaaagaagacgagctgatggagttttcagacttggaaagt
gattccgaagagaagccttgcacgaagccgcggcggccccaggacaggtcccagggctac
gcgaggagtgagtgctttagagttgagaagaatctgctcgtctatggctggggacggtgg
acagatatcctttcgcacgggcgctacaagcgtcagctcactgagcaagacgtggaaacc
atctgcagggccatcctcgtgtactgcctcaatcattacaagggggatgagaatatcaaa
agcttcatctgggatttgatcacgcccacggcggacggccagacgcgagccttggtcaac
cattctggtttatcggccccggtgcccaggggaaggaaaggaaagaaggtgaaagcccag
agcacccatccggtggtgcaggatgccgactggctggcgggttgcaacccggatgccttg
ttccaggaggacagctacaagaaacacctgaagcatcactgcaataaggtcctgctgcgt
gtccgcatgctgtactacctaagacaagaagttataggagaccaggcagataagatttta
gagggtgccgactcaagtgaggctgatgtgtggatccctgaacccttccatgcggaagtc
cccacagattggtgggataaggaagcagataagtccctcctaattggagtgttcaaacac
ggctacgagaagtacaattccatgcgagctgaccccgcactgtgcttcctggaacgagtc
gggatgcccgatgccaaggccatagctgccgagcaaagaggaacagacatgctagcagat
ggcggtgacgggggagaatttgatagagaagatgaagacccggaatataaaccaaccagg
actccattcaaggatgaaatagatgaatttgcaaattctcctccagaagataaggaagaa
tccatggagatccgctccacaggcaagcacagcgagagtaatgctgagttaggccaactt
tactggcccaacacctcgaccctgaccacccgtctgcgccggctcattactgcctatcag
cgcagctataaaaggcaacaaatgaggcaagaggctctaatgaagactgaccggcggaga
cggcggcctcgggaggaagtgagagcactagaagcggaaagggaagctataatatctgag
aaacggcaaaagtggacaagaagagaagaggctgatttttaccgtgtggtatccactttt
ggagttatttttgaccccatgaaacagcagtttgactggaaccaatttcgagcctttgcc
agacttgacaaaaagtctgacgagagtttggagaaatacttcagttgttttgtggccatg
tgtaggcgagtgtgtcgaatgcccgctaagccagatgatgaaccacctgacctctcctcc
atgattgagccaatcacagaagagcgtgcctctagaactctctaccgcatcgaactgctg
cggaaaatacgcgagcaggttcttcatcaccctcagctgggagagaggctgaagctctgc
cagccgagtttggatttgccagagtggtgggaatgtgggaggcatgaccgggacttgctg
gtcggcgctgctaaacacggggtcagccggacggattatcacatcctcaatgaccccgag
ttatctttcttggatgcgcacaaaaactttgcccagaaccgaggggcaggtaacctgtcc
tccctgactccactggccgttggatttggccagactcctgccgtcctcccgtctgctcac
gcccaggaagagaaggctgcgggacaaagcgagggcaaagcggaggagtctggcggcgtg
agcacccaagagaaacccgaggggaaggaggaggaagaagagaccgacggcagggagaag
gacagtaagcagggctgtgaggccgaggcgagctctgtgaaaagtgacctgaaagggatg
gaggtcggtgccgacacagggcccaagtctatttcggaaaaaggttctgaagaggacgaa
gaagaaaagctggaggatgatgataagtcggaagagtcttcccagcctgaagcaggagct
gtctctagagggaagaatttcgatgaagaaagcaatgcctccatgagcaccgctagggat
gaaacccgagatgggttctacatggaggatggagacccttcagtagctcagctccttcat
gaaagaacatttgccttctcattttggcctaaggaccgagtaatgataaaccgattagac
aacatctgtgaagccgtgctgaaaggcaaatggccagtaaataggcgccagatgtttgat
ttccagggcctcatccctggttacacgccacccaccatggacagtcccctgcagaagagg
agctttgccgagctctccatggtcggccaagctagcattagtgggagcgaggacctcacg
acttctcctcagttgtcaaaggaagacgccctaaacctctctgtccctcgccagcggagg
aggaggaggagaaaaattgaaattgaggccgagagagcggccaagcggcgaaacctcatg
gaaatggttgctcagctgagggagtctcaagtggtctcagaaaacggacaagaaaaagtt
gtagatttatcaaaggcctcaagagaggcagcaagctctacctcaaatttttcgtctctg
acttcaaagtttatcttgcctaatgtctcgacaccggtgtccgatgcctttaagactcaa
atggagctgctccaggcaggcctgtcacgcacacccacgaggcatctgcttaacggctcc
ctggtggatggagagcctcccatgaagaggaggcggggaaggaggaaaaacgtggagggt
cttgatctgcttttcatgagccacaaacggacgtcattgagtgcagaggatgctgaggtg
accaaagctttcgaagaagatatagagaccccacctacaagaaacattccttctcctgga
cagctggacccagacacgcggatccccgtgataaatcttgaagacgggactaggctggtg
ggggaggacgctcctaaaaataaggacttagttgaatggctgaagctgcatcctacttac
actgttgatatgccaagttatgtaccaaagaatgcggatgtgctgttttcctcatttcag
aaaccgaaacagaaacgacatagatgtcgaaaccctaataaattggatataaacactttg
acaggagaagaaagggtgcctgttgtcaataaacgaaatggaaagaagatgggtggagct
atggcgcctccgatgaaggacctgcccaggtggctggaagagaaccctgaatttgcagtc
gctccagactggactgagatagtgaagcagtctggttttgttcccgagtcgatgtttgac
cgccttctcaccggccccgtggtgcggggggaaggagcgagcaggagaggacgaaggccc
aagagcgagatcgccagggcggccgcggcggccgcggcggcctccacttccggaatcaac
cccctgttggtgaacagcctgtttgccgggatggacctcacgagccttcagaacctccag
aacctccagtctctccagctcgcggggctcatgggcttccctccaggactggcgacggcg
gccgccgccgccggaggcgacgccaagaaccctgcggccgtgctgcccctgatgctgccg
ggcatggcgggcctgcccaacgtgttcggactgggcgggctgctgaacaacccgctctcc
gctgctgctggcaacgccgccgccgcggccgccgccgccgccgctcccgggcagggagag
ccggaagacggcgccccgaaagcggaagagaaaggcaacgagaacgaagacgagaacaaa
gactccgagaaaagcacagatgctgtttcggctactgactctgcgaatggatctgttggt
gctgctactgccccggccggattgccctccaacccgctcgccttcaaccctttcctcctg
tccaccgtggcgccaggcctcttctacccgtccatgtttctacctccgggactgggggga
ttgacactgcctgggttccccgcgttagcaggactccagaacgccgtgggctccagcgaa
gagaaggcccccgacaaggccgaggggggcgccttccaggaagaggagaacctggacggc
agcgacgccgaggagaacccggaaaagaccgcggggtcctccgtcttcgaagacgaagga
gcacagggtgaagagctggactcgctcgatgggggggatgaactagaaaacaacgaaaat
gatgaataa
DBGET
integrated database retrieval system
