Lynx rufus (bobcat): 124507772
Help
Entry
124507772 CDS
T08475
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124507772
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lruf01002
]
124507772
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lruf03021
]
124507772
03036 Chromosome and associated proteins [BR:
lruf03036
]
124507772
Peptidases and inhibitors [BR:
lruf01002
]
Metallo peptidases
Family M1
124507772
Transcription machinery [BR:
lruf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124507772
Coactivators
SAGA/TFTC/STAGA complex
124507772
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124507772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1_N
Peptidase_M1
HEAT_spiro
SR-25
Motif
Other DBs
NCBI-GeneID:
124507772
NCBI-ProteinID:
XP_046930086
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MPPTGLEPSRMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHNESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI
PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG
TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAIAGNQEA
AINPSSHAQLVGFQNPEDDHLAKEASCNMSAHQQGVKRKADTPLGSPLEPGQILEKNEDS
SKVKLKIRFSNSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPASSRSALVPQ
HSSGCDGTPPTKPQWSMELTRKGTGKEQSPLEMSMHPAATAPLSVFTKESASSKHSDHHH
HHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFAFSSPASGRSIRSPSLSD
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaactggtttagagccctccagaatgaacaggaagaaaggagacaagggcttt
gaaagcccaaggccatataaattaacccatcaggtcgtctgcatcaacaacataaatttt
cagagaaaatctgttgtgggattcgtggaactgactatatttcccacagttgcaaacttg
aatagaatcaagttgaacagcaaacagtgtagaatataccgagtaaggatcaatgattta
gaagctgcttttatttataatgacccaaccttggaagtctgtcacaatgaatcaaaacag
agaaatctaaattatttttccaatgcttatgccgctgcagttagtgctgtggatcctgat
gcaggaaatggagaactttgcattaaggttccctcagagttatggaaacatgttgatgaa
ttaaaggtcctaaagatacacatcaatttttctttggatcagccaaaaggaggtcttcat
tttgtggtacccagtgttgagggaagtatggcagagagaggtgctcatgttttctcttgt
gggtatcaaaattccacaagattttggttcccatgcgttgattcatactctgaattatgt
acatggaaattagaatttacggtagatgccgcaatggtggctgtttccaatggagatttg
gtggagacagtatatacccatgatatgaggaagaagaccttccattatatgctcaccatt
ccaacagctgcgtcaaatatctctttggccattggaccttttgaaatacttgtagatcca
tatatgcacgaggttactcatttttgtttacctcaacttcttccactgcttaaacatact
acgtcatatcttcatgaagtttttgagttttatgaagaaattcttacatgtcgataccca
tactcctgttttaagacagtattcatcgatgaggcttatgttgaagtggctgcttatgct
tccatgagtatatttagcacaaatcttttacatagtgccatgattatagatgagacacct
ttgactagaaggtgtttagcccagtccttggcccagcagttttttggatgtttcatatcc
agaatgtcttggtctgatgaatgggtactgaagggaatttctggctatatttatggactt
tggatgaaaaaaacttttggtgttaatgaataccgccactggattaaagaggagctagac
aaaatagtggcgtatgaattaaaaactggtggagttttattacatcccatatttggtgga
ggaaaagagaaggataatccagcatctcatctacacttttcaataaagcatccacataca
ctttcctgggaatactacactatgtttcagtgtaaagctcaccttgtgatgagattgatt
gaaaataggatcagtatggaattcatgctacaagttttcaataaactgttaagtttggct
agtactgcttcatcgcagaagttccagtcacatatgtggagtcagatgttggtttccaca
tctgggtttttgaaatccatctcaaatgtctctggcaaagacatccagcctttaataaaa
cagtgggtagaccaaagtggagtggtaaaattttatggaagttttgcatttaataggaaa
cgaaatgtcttggaattggaaataaaacaggattatacatctcctggaactcagaaatat
gtgggaccacttaaagtgacagtgcaggaattagatggatccttcaatcatacgttgcaa
attgaagaaaacagccttaaacatgatataccctgtcattccaaaagcagaaggaataag
aagaaaaaaattccactgatgaatggagaagaagttgacatggatctttctgcgatggat
gctgattcccctttgctgtggataaggatagacccagatatgtcagtgctgaggaaagtt
gagtttgagcaagctgattttatgtggcagtatcagctccgctatgaaagagatgttgtt
gcacagcaagagtccattctggccttggaaaaattccctacgccagcatctcgcctcgct
ctcactgacatactagaacaagagcagtgtttctaccgagtgagaatgtcagcttgcttc
tgccttgcaaagattgcaaattcaatggtaagcacatggacaggaccaccagccatgaag
tcactttttaccagaatgttttgttgtaaaacttgtccaaacattgtgaaaacaaacaac
tttatgagctttcaaagctattttctacagaagacaatgccagttgcaatggctttattg
agagatgttcacaacctttgtcccaaagaagtcttaacgttcattttagacttaatcaag
tacaatgacaacagaaaaaataagttttcagataattattatcgtgcagaaatgattgat
gcccttgccaactctgttacgcctgcagtcagtgtgaataatgaagttcgaactttggac
aacttaaatccagatgtgcgacttattcttgaagaaatcaccaggtttttgaatatggaa
aaacttcttccaagttatagacatactatcactgtcagttgtttgagagccataagagtg
cttcaaaagaatggacatgtgccaagtgatcccgctctttttaagtcttatgccgagtat
ggacactttgtggacattaggatagcagctttggaagcagtcgttgattatactaaagtg
gaccggagttacgaagaactgcaatggctacttaatatgattcagaatgaccctgtcccc
tatgtaagacataagattctaaacatgttgactaagaacccaccatttactaagaacatg
gaatctcccttatgtaatgaagccttggtagatcaactttggaaacttatgaattctggt
acttcacatgactggaggttacgttgtggtgctgtggacttgtacttcacactttttggc
ctcagtagaccttcctgcttgcccttgccagagcttgggttggttcttaatctaaaagag
aaaaaagctgtcttgaatccgaccataattccagaggccatagcaggcaaccaagaagct
gcgattaatccaagtagtcacgcacagctagttggatttcagaaccctgaagatgatcac
cttgccaaggaagcatcatgtaatatgtcagctcatcagcagggagtgaagaggaaggct
gatacaccactggggtccccactagaacctggtcaaatactggagaagaatgaggatagc
agtaaagtcaaactcaaaatcagattttcaaattctcaagatgaggaggaaattgatatg
gacactgttcacgatagccaggcgtttatttcccatcatttgaacatgcttgaaaggcca
tcaactccagggctttctaaatatcgtccagctagctcccgatctgctttagtaccccaa
cactcatcaggctgtgatggcacacctcccacgaaaccccagtggagcatggaacttaca
cggaagggaacaggtaaagaacagtcacctttggagatgagcatgcatccagctgcaaca
gctccactctcagtgtttactaaggaatccgcgtcctccaaacacagtgaccaccatcac
caccatcaccatgaacacaagaaaaagaagaagaagcacaaacataagcataagcacaag
cacaagcatgatagtaaagagaaggacaaagagcctttcgctttctccagccctgccagc
ggcaggtccattcgttctccttctctttcagactga
DBGET
integrated database retrieval system
