Lynx rufus (bobcat): 124508015
Help
Entry
124508015 CDS
T08475
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lruf00535
]
124508015
04091 Lectins [BR:
lruf04091
]
124508015
Proteoglycans [BR:
lruf00535
]
Cell surface proteoglycans
Others
124508015
Lectins [BR:
lruf04091
]
C-Type lectins
Others
124508015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF3377
Motif
Other DBs
NCBI-GeneID:
124508015
NCBI-ProteinID:
XP_046930362
LinkDB
All DBs
Position
Unknown
AA seq
2326 aa
AA seq
DB search
MSSGQQPLPPAPALALALALTLGMLARPSSAASFFGENHLEVPVATALTDIDLQLQFSTS
QSEALLLLAAGQADHLLLQLYSGRLQVRLTLGQEELKLQTSAGTLLSDSVLHTVQLTISD
REALLSVDGLLNASAPVPGAPLEVPYGLFLGGTGSLGLPYVRGTSRPLRGCLHAATLNGR
NLLRPLTPDVPEGCAEEFSADDSVALGFSGPHSLAAFPAWSTRDEGTLEFTLTTRSHRAP
LAFQAGGRHGDFIYVDIFEGHLRAVVEKGQGTVLLHNSVPVADGQPHEVSVHVDAHQLEI
SVDQYPTRTSNRGVLSYLDPRGSLLLGGLDTEASRHLQEHRLGLVPGAVNVSLLGCMEDL
SINGQRQGLREALLTRSMAAGCRLEEDEYEDDTYGPYEAFSTLAPEAWPAMELPEPCVPE
AGLPPVFANFTQLLTISPLVVAEGGTAWLEWRHVQPTLDLSEAELRKSQVLFSVSRGARH
GELELDIPGAQARKMFTLLDVVNRKARFVHDGSEDTSDQLVLEVSVTARVPVPSCLRRGQ
TYILPIQINPVNDPPRVIFPHGSLMVILEHTQKPLGPEVFQAYDPDSSCEGLTFQLLGTP
TGLPVERRDQPGEPATEFSCRELEAGSLVYVHRGGPAQDLTFRVSDGLQASPPATLRVVA
VRPTIQIRHNTGLHLAQGSAAPVLPANLSVETNAVGQDVSVLFRVTEAPRFGELQKQGAG
GAEGAEWRATQAFHQRDVEQGRVRYLSTDPQHRTEDSVENLALEVQVGQEILSNLSFPVT
IQRATVWLLRLEPLHTQNTQQEALTTAHLEATLEEEEAGPSPTTFHYEVVQAPRKGNLRL
QGTRLSDGQSFTQNDLQAGRVTYGATARASEAVEDIFRFRVIAPPHFSPLYTFPIHIGGD
PDAPVLTNILLSVPEGGEGILSADHLFVKSLNSASYLYEVMERPRHGRLVWRGAQDQAAT
VTSFTNEDLLQGRLVYQHDNSETTEDDIPFVATRQSEGSGGMAWEEVRGVFRVAIQPVND
HAPVQTISRVFHVARGGRRLLTTDDVAFSDADSGFADTQLVLTRKDLLFGSIVAVDEPTR
PIYRFTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLHVANGSSLV
VPQGGQGTIDTAVLHLDTNLDIRSGDEVRYRVTAGPHWGQLLRAGQPATVFSQQDLLDGA
ILYSHNGSLSPRDTLAFSVEAGPVHTDATLQVTIALEGPLAPLHLVRHKKIYVFQGEAAE
IRKDQLEAAQEAVPPADIVFSVKTPPRAGYLVMLSHGASVAEPPSLDPVQSFSQEAVDAG
RVLYLHSRPEAWSDAFSLDVASGVGAPLEGVRVELEVLPAAIPLETQNFSVPEGGSRTLA
PPLLRVTGPYFPTLPGLDLQVLEPPQHGALRREEGPQEGTLGAFSWKEVEQQLIRYVHDG
SETLTDSFVLVANASEMDRQSHPVAFTITILPVNDQPPILTTNTGLKMWEGATVPFPPEA
LRATDSDSGPEDLVYTIERPSNGQVVLRAAPGTEVHSFTQAQLDGGLVLFSHRGALDGGF
HFSLSDGEHASPGHFFRVTAQKQLLLSLEGSRTLTVCPGSVQPLSSQSLRASSSAGTDPH
HLLYRVVQGPRLGRLFHARQGGSGEALVNFTQAEVYAGTVLYEHEMPAEPFWEVRDAVEL
QLSSPPAPDVATTLAVAVSFEAACPQRPSRLWSNKGLWVPEGQRAEITRDALDASNLLAT
IPSPQRPEHDVLFQITQFPTRGQLLVSGEPLDAGRPHFLQSELAAGQLVYAHGGGGTQQD
GFRFRAHLQGPAGASVSGPQTSEAFAITVRDVNERPPRPQASVPLRLIRGSRAPVSRAQL
SVVDPDSAPGEIEYEVQRAPLNGFLSLAGAGPGPVIRFTQADVDAGRLAFVANGSSVAGI
VQLSVSDGASPPLPVALAVDVLPAAIDVWLRAPLEVPQALGRSSLSREQLQVVSDREEPD
AAYRLTRGPRFGQLLVAGQPATAFSQLQVDQGEVVFAFTNFSSSRDHFSVLALARGANAS
ATVNITVRALLRVWAGGPWPQGATLRLDSTVLDAGELANRTGSVPRFRLLAGPRHGRVVR
VPRARTEPRDSQLVEQFTQRDLEDGRLGLEVGRPEGRSPGPAGDSLTLELWARGVPPAVA
SLDFDTEPYNAARPYSVALLSLPEAAQTEARNPESSTPTGEPGPLASSPVPTVARRGFLG
FLEANMFSVIIPVCLVLLLLALILPLLFYLRKRNKTGKHDVQVLTAKPRNGLASDTETFR
KVEPGQAIPLTAVPSQGPPPGGQPDPELLQFCRTPNPALKNGQYWV
NT seq
6981 nt
NT seq
+upstream
nt +downstream
nt
atgagctccggccagcagcctctgcctccagcccctgccctggccctggccctggctttg
accctgggcatgttggccagaccttcatccgcagcctccttctttggtgagaaccacctg
gaggtgcccgtggccacagctttgaccgacatagacctccagctgcagttctccacgtcc
caatccgaagccttgcttctcctggcagcaggccaggctgaccacctcctgctgcaactc
tactccggacgtctgcaggtcagactcaccctgggccaggaggagctgaagctgcagacc
tcagctggaactctgctgagcgactccgtcctccacaccgtgcagctgactatttccgac
cgcgaggccttgttgtcagtcgatgggctcctgaatgcctcagccccagtcccgggagct
cccctagaggtcccctatgggctcttcctggggggcactggaagccttggcctgccctac
gtgaggggaaccagtcggcccctgaggggctgcctccatgctgccaccctcaatggccgc
aacctcctgcgaccactaacgccagacgtgcctgagggctgtgctgaagagttttctgct
gatgacagtgtggccctgggcttctctgggccccactcactggctgccttccctgcctgg
agcactcgggatgaaggcaccctggagtttacactcaccactcggagccaccgggcgccc
ctggccttccaggcggggggccggcatggggatttcatctacgtggacatatttgagggc
cacctgcgggctgtggtcgagaagggccaaggcactgtattgctccacaacagcgtgcct
gtggccgacgggcaaccccatgaggtcagcgtccacgtggatgctcaccagctggaaatc
tccgtggaccagtaccccacacgcacttccaaccgtggggtcctcagctacctggaccca
cgtggcagtctcctccttggggggctggacacagaggcctctcgccacctccaggaacat
cgcctgggcctggtgccgggggctgtcaatgtctccctactgggctgcatggaggacctc
agcatcaatggccagaggcaggggctccgggaggccttgctgactcgcagcatggcggcc
ggctgccggctggaggaagatgaatacgaggacgacacctacggcccgtacgaagctttc
tccaccctggcacctgaggcttggccagccatggagctgcccgagccctgcgtgcctgaa
gcggggctgcctcctgtctttgccaactttacccaactgctgaccatcagcccgctggtg
gtggccgagggcggcacagcctggcttgagtggcggcacgtgcagcccacgctggacctg
agcgaggccgagctgcgcaaatcccaggtgctgttcagcgtgagccgcggggcacgccac
ggggagttggagctggacatccccggtgcccaggcacggaagatgttcaccctcctggac
gtggtgaaccgcaaggcccgcttcgtccatgatggctctgaggacacctctgaccagctg
gtgctggaggtgtcagtgactgctcgggtgcccgtgccctcctgcctccggaggggccaa
acttacatcctgccaatccagataaaccctgtcaacgacccaccccgcgtcatcttccca
cacggcagcctcatggtgatcctggaacacacacagaagccgctggggccagaggttttc
caggcctacgacccagactcttcctgcgagggcctcaccttccagctccttggcaccccc
accggcctccccgtggagcgccgagaccagcctggggagccagcaaccgagttctcctgc
cgggagctggaggcgggcagtctagtctatgtccaccgtggtgggcccgcccaggacctg
acgttccgggtcagcgatgggctgcaggccagccctcccgccaccctgagggtggtggcc
gtccggcccaccattcagatccgccacaacaccgggctgcacctggcccagggctccgcc
gcacctgtcttgcccgccaacctgtcggtggagaccaacgctgtggggcaggatgtgagc
gtgctgttccgagtcaccgaggccccgcggttcggggagctgcagaagcagggggcaggt
ggggccgagggtgctgagtggcgagccacgcaggcattccaccagcgggacgtggagcag
ggccgcgtgagatacctgagcaccgacccacagcatcgcacggaggactctgtggagaac
ctggccctggaggtacaggtggggcaggagatcctgagcaatctgtccttcccagtgacc
atccagagagccacagtgtggctgctgcggctggagccactgcacactcagaacacccag
caggaggcgctcaccacagcccacctggaagccaccctggaggaggaggaggcaggccca
agccccaccaccttccactacgaggtggttcaggcccccaggaagggtaatcttcggcta
cagggcacacggctgtcagatggccagagcttcacccagaatgacctgcaggccggtcgg
gtgacctacggggccacagcacgtgcctcggaggcagtcgaggacatcttccgtttccgt
gtcatagctccgccacacttctccccactctataccttccccatccacattggtggtgac
ccggacgcccccgtcctcaccaacatcctcctctcggtgcccgagggtggggagggtatc
ctctctgctgaccacctcttcgtcaagagtctcaacagtgccagctacctctatgaggtc
atggagcggccccgccatgggaggttagtttggaggggggcacaggaccaggccgccacg
gtgacatccttcaccaacgaggacctgctgcagggccggctggtttaccagcatgacaac
tctgagaccacagaagatgacatcccatttgtggctacccgccagagcgagggcagtggt
ggcatggcctgggaggaggtacggggcgtcttccgcgtggccatccagcctgtaaatgac
cacgctcccgtgcagaccatcagccgcgtcttccacgtggccaggggtgggcggcggctg
ctgacaacagacgacgtggccttcagtgatgctgactctggctttgccgacactcagctg
gtactgacccgcaaggaccttctcttcggcagtattgtggctgtggatgagcccacgcgg
cccatctaccgcttcacccaggaggacctcaggaagaggcgagtcctgtttgtgcactcg
ggggccgaccgcggctggattcagctgcaggtgtcggacgggcagcaccaggccaccgcg
ctgctcgaagtgcaggcctccgagccctacctccatgtggccaatggctccagcctcgtg
gtccctcagggaggccagggcaccattgacacagctgtgctccacctggacaccaaccta
gacatccgcagtggggatgaggtccgctaccgcgtcacggctggcccgcactgggggcag
ctgctccgggccggccagccagccacagtcttctcccagcaggacctgctggacggggcc
attctctacagccacaacggcagccttagccctcgagacaccctggccttctctgtggag
gcagggcctgtgcacacagatgccaccctgcaagtgaccattgccctagaggggccactg
gccccactgcatctggtcaggcacaagaagatctacgtcttccagggggaggcggctgag
atcagaaaggatcagctggaggcagcccaggaggcagtgccaccggcggacatcgtgttc
tcagtgaagaccccgccgcgcgccggctacctggtgatgctgtcccacggcgcctccgtg
gctgagccacccagcttggacccagtgcagagcttctcccaggaggcagtggacgcgggc
agggtcctatacctgcactcccgccccgaggcctggagcgatgccttctccctggatgtg
gcctcaggcgtgggcgctccccttgagggtgtccgtgtagaactggaggtgctgcctgct
gccatcccactggagacacagaacttcagcgtccccgagggcggcagccgcacgctggcc
cctccactgctccgcgtcacggggccttacttccccacgctgccaggccttgacctgcag
gtgctagagccaccccagcatggggccctgcggagagaggaaggtcctcaagaggggacc
ctcggcgctttctcctggaaagaggtggaacagcagttgatccgctatgtgcacgatggg
agtgagacgctgacagatagctttgtcctagtggctaatgcctcagagatggaccgccag
agccatccggtggccttcaccatcaccatcctgcccgtcaatgaccaaccccccatcctc
accacaaacacaggcctgaagatgtgggagggggccactgtgcccttccctccggaggcc
ctcagggccacagacagcgactcaggaccggaggacctggtctacaccatcgagcggccc
agcaatgggcaggtagtgctgcgggcggcaccgggcaccgaggtccacagcttcacgcag
gcccagctagatggagggctggtgctgttctcacatagaggagccctggacggaggcttc
cacttcagcctctccgatggtgagcacgcttcccccggacacttcttccgcgtgacggcc
cagaagcagctgctcctctcgctagagggcagccggacgctgaccgtgtgcccagggtcg
gtccagccgctgagcagccagagcctgagagccagctccagtgcaggcacggacccccac
cacctgctctaccgcgtggtgcagggcccccggctgggccggctgttccacgcccggcag
ggcggctctggggaggccctggtgaacttcactcaggctgaggtgtatgctgggactgtt
ctgtatgagcacgagatgcccgctgagcccttctgggaggtccgtgacgccgtggagctc
caactgtcgtcgcccccagcccctgatgtggccaccacccttgctgtggctgtgtctttc
gaggctgcctgtccccagcgccccagccgcctctggagtaacaaaggtctttgggtccct
gaaggccagcgggcggagatcaccagggacgcccttgatgcctccaacctcctggccacc
attccatcaccccagcgcccagagcacgacgtactcttccaaatcacacagttccccacc
cggggccagctgttggtgtctggggagcccctcgacgctgggcggccccacttcctgcag
tccgagctggccgcagggcagctggtctacgcccacggcggcgggggcacccagcaggat
ggcttccgcttccgcgcccacctccaggggccggcgggggcttccgtttcgggcccccaa
acctcggaggccttcgccatcaccgtgcgggacgtgaacgagcggccgcctcggccccag
gcctccgtgccgctgcggctcatccggggctcccgcgccccggtctcccgggcccagctg
agtgtggtggacccagactcggcccccggggagatcgagtacgaggtgcagcgggccccc
ctcaacggcttcctgagtctggcgggggccggcccggggcccgtgatccgcttcacgcag
gccgacgtggacgcggggcggctggccttcgtggccaacgggagcagcgtggccggcatc
gtgcagctgagcgtgtctgacggggccagccccccgctgcccgtggccctggccgtggac
gtcttgccggcggccatcgacgtgtggctgcgcgcgccgctagaggtgccccaggccctg
gggcgctcctccctgagccgggagcagctccaggtggtgtcagaccgggaggagccagac
gcagcctaccgcctcaccagggggccccggttcgggcagctcctggtggccgggcagccg
gccacggccttcagccagctccaggtagaccagggggaggtggtcttcgccttcaccaac
ttctcctcctctcgcgaccacttcagcgtcctggcactggccagaggtgccaacgcgtcg
gccacagtgaacatcaccgtcagggcgctgctgcgagtgtgggcgggtgggccgtggccc
cagggtgccaccctgcgcctggactccaccgtcctagatgcaggcgagctggccaaccgc
acgggcagtgtgccccgtttccggctcctggcgggaccccggcatggccgcgtggtccgt
gtgccccgggccagaacggagcccagggacagccagcttgtggagcagttcacccagcgg
gaccttgaggatgggaggctggggctggaggtgggcaggccagagggtaggtcccctggc
cccgcaggcgacagtctcactctggagctgtgggcacggggtgtgccccctgctgtggcc
tcactggactttgacactgagccttacaatgcagcccggccctacagtgtggccctgctc
agtctccccgaggctgctcagacagaagcaaggaacccagagagcagcacccccactggc
gagccaggcccattagcctccagccccgtgcccaccgtggccaggaggggcttcctgggc
ttcctggaggccaacatgttcagtgtcatcattcccgtgtgcctggtcctcctgctcctg
gcactcatcttgcccctgctcttctacctccgcaaacgcaacaagacgggcaagcacgac
gtccaggtgctgaccgccaagccccgcaacggcctagccagcgacaccgagaccttccgc
aaggtagagccgggccaagccatcccactcaccgcagtgcccagccaggggcccccgcca
gggggccagcctgacccagagctcctacagttctgccggacacccaaccctgctctcaag
aacggccagtactgggtgtga
DBGET
integrated database retrieval system
