Lynx rufus (bobcat): 124508026
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Entry
124508026 CDS
T08475
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04350
TGF-beta signaling pathway
lruf04360
Axon guidance
lruf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124508026
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124508026
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124508026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124508026
Cell adhesion molecules [BR:
lruf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124508026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
Tissue_fac
SusE
DUF4959
Izumo-Ig
EphA2_TM
FAM176
TM_ErbB1
TMEM154
Motif
Other DBs
NCBI-GeneID:
124508026
NCBI-ProteinID:
XP_046930374
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MAAERGARRLLGTSSFWLCCLLLLGRPAPAAAARSGSPPQSPGSSVRTFTPFYFLVEPVD
TLSVRGSSVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHNK
PDEGYYQCVATVESLGTIVSRTAKLTVAGLPRFASQPEPSSVYAGNSAVLNCEVSVDLVP
FVRWEQNRQPLPLDDRVIKLPSGTLVVSNATEGDGGLYRCTVESGGPPKYSDEAELKVLP
DPEFTSNLVFLKQPSSLVRVLGQNAVLPCVASGLPPPAIRWMKNEKALDPESSEKLALLA
GGSLEISDVTEDDAGTYFCIADNGNETVEAQAELTVQVQPEFLKQPTNIYAHESMDIVFE
CEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNVQA
GAQLIILEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEG
IVRERVENTSRPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPEVQLPGP
APNIRAHAASPTSITVTWETPLSGNGEIQNYKLYYMEKGTDKEQDVDVSSHSHTVNGLKK
YTEYSFRVVAYNKHGPGVSTQDVAVRTLSDVPSAAPQNLSLEVRNSKSIVIHWQPPPPAT
QNGQITGYKIRYRKASRKSDVTETLVPGTQLSQLIEGLDRGTEYNFRVAALTINGTGPAT
DWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPH
AQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTDTSEVDLFVI
NAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPA
NTKYKNANATTLSYLVTGLKANTLYEFSVMVTKGRRSSTWSMTAHGTTFEFVPTSPPKDV
TVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQE
LTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKADSSDKMPNDQASGSAGKGSRLPDLGSD
YKPPMSGSNSPHGSPTSPLDSSMLLVIIVSVGVVTIVVVVVIAVFCTRRTTSHQKKKRAA
CKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVD
NSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHPLDNP
HHHFHSSSLAPPARSHLYHPGSPWPIGTSLSLSDRANSTESVRNTPSTDTMPASSSQTCC
TDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPTYDPALPS
TPLLSQQALNHHIHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYEPDEL
TKEMAHLEGLMKDLNAITTA
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcggggagcccggcgactcctcggcacctcctccttctggctctgctgc
ctgctgctgctcgggcgcccggcgcccgccgcggccgccaggagcggctccccgccgcag
tcaccaggatccagcgttcgaacattcactccattttactttctggtagaaccagtggat
acactctcagttagaggctcttctgttatattgaactgttcagcatattctgagccttct
ccaaaaattgaatggaaaaaagatgggacttttttaaacttagtatctgatgaccgacgc
cagcttctcccagatgggtctttatttatcagcaatgtggtgcattccaaacacaataaa
cctgatgaaggttattatcagtgtgtggccactgttgagagccttggaacgattgtcagc
agaacagctaagctcacagtagcaggtcttccaagatttgctagccaaccagaaccttct
tcagtttatgctgggaacagtgcagttctgaattgcgaagtcagtgtggatctggtccca
tttgtgaggtgggaacagaacagacagcctcttcctctggatgatagagtcatcaaactt
ccaagtgggacactggttgtgagcaacgccactgaaggagacggagggctctaccgctgc
acagttgagagcggcgggccgccgaagtatagcgatgaagcggagttaaaagttcttcca
gatcctgagttcacatcaaacttggtatttctgaaacaaccttcttccttagtcagagtc
cttggtcagaatgcagtgttgccgtgtgtcgcttcaggacttcctcctccagccattaga
tggatgaaaaatgagaaggcacttgacccagaaagctctgaaaaattggcgttgctggca
ggtggtagtctggagatcagtgatgtcactgaggatgatgcggggacttacttttgtata
gctgataatgggaatgagaccgttgaagctcaagcagagcttacagtacaagtccaacca
gaattcttgaaacagccgacgaatatatatgctcatgagtccatggatatcgtattcgaa
tgtgaagtgactgggaaaccgactccaaccgtgaagtgggtcaagaatggagatgtggtt
atcccaagtgattactttaagattgtaaaggaacataatcttcaagttttgggtctggtg
aaatcagatgaagggttctaccaatgcattgctgagaatgatgttggaaatgtacaagct
ggagcccaactgataatccttgaacatgcaccagccacaacgggaccactgccttcagct
cctcgggatgtcgtggcctcgctggtctctacccgcttcatcaaattgacatggcggaca
cctgcatcagatcctcacggggacaaccttacctattctgtcttctacaccaaggaaggg
attgttagggaacgtgttgagaataccagtcgcccaggagaaatgcaggtgaccattcaa
aacctaatgccagccactgtgtacatctttagagttatggctcaaaataaacatggctct
ggagaaagttcagctccactccgagtagaaacacagcctgaggttcagcttcctggccca
gcacctaacatccgagcacatgcagcttcacctacgtccatcactgtcacctgggaaaca
cctctgtctggcaatggggaaattcagaattacaaattgtactacatggaaaaagggact
gataaagaacaggatgttgacgtttcaagtcactcccatactgttaatgggttgaaaaaa
tatacagagtatagtttccgagtggtggcttacaacaaacatggtcctggagtctccaca
caagatgttgctgttcgaacgttgtcagatgttcccagtgctgctcctcagaatctgtcc
ttagaagtaagaaattcaaagagtattgtgattcactggcagccacctcctccagccaca
cagaatggtcagattactggctacaagattcgctaccgaaaggcctcccgaaagagtgac
gtcactgagaccttggtacctgggacacagctctctcagctgattgaaggtcttgatcgg
ggaactgaatataatttcagagtggctgctctaaccatcaatggcacaggcccggctact
gactggctgtctgctgaaacttttgaaagtgatttagatgaaactcgtgttcctgaagtg
cctagttctcttcacgtccgaccacttgtcactagcattgtagtaagctggactcctcca
gagaatcagaacattgtggtcagaggttatgccattggttatggtattggcagccctcat
gcccagaccatcaaagtggactataaacaacgatattacaccatcgaaaatctggatccc
agctctcactacgtgataaccctgaaagcctttaacaacgtgggtgaaggcatccccctg
tacgagagcgctgtgaccagacctcacacagacacttctgaagttgatttatttgttatt
aatgctccatacactccagtgccagatcccactcccatgatgccacctgtgggagttcag
gcttccattctgagtcatgacaccataaggatcacatgggcggacaactcactgcccaaa
caccagaagattacggattcccggtactacacagtccgatggaaaaccaacatcccagca
aacaccaagtacaagaatgcaaatgctacgactttaagttatttggtgactggtttaaaa
gcaaatacactgtatgaattctctgtgatggtgaccaaaggtcgaagatcaagcacatgg
agtatgacagcccatgggaccacctttgaattcgttcctacttctccacccaaggacgtg
acagttgtgagtaaagagggaaaacctaggaccataattgtaaattggcagcctccctca
gaagccaatggcaaaattacaggttacatcatatattacagtacggatgtgaacgcagag
atacacgactgggttattgagcctgttgtgggaaacaggctgactcaccagatacaagag
ttaacacttgacacaccatactactttaaaatccaagcccgaaactcaaagggcatgggg
cccatgtctgaagccgtccaattcagaacacctaaagcggactcctctgataaaatgcct
aatgatcaagcctcagggtctgcaggaaaaggaagccggcttccagacctaggatctgac
tacaaacctccaatgagtggcagtaacagcccgcatggaagtcccacctctcccctggac
agtagcatgctgctggtcatcattgtttctgttggcgttgtcaccattgtggtggttgtg
gtcattgctgtcttttgtaccaggcgtaccacctctcaccagaaaaagaaacgagctgcc
tgcaaatcagtgaatggttcccacaagtacaaagggaactccaaagatgtcaaaccccca
gacctctggatccatcatgagagactggagctgaaacccatcgataagtctccagaccca
aatcccatcatgactgatactccaattcctcggaactctcaagatatcacaccagttgac
aattccatggacagcaacatccatcaaaggcggaattcatatagagggcatgagtcagag
gacagcatgtctacactggctggaaggcgaggaatgagaccaaaaatgatgatgcccttt
gactcccagccaccccaacctgtgattagtgcccatcccatccatcccctcgataaccct
caccatcatttccactccagcagcctcgctcctccagcccgcagtcatctctaccacccg
ggcagcccgtggcccattggcacatccctgtccctttcagacagggccaattccacagaa
tccgttcgaaatacccccagcactgacaccatgccagcctcctcgtctcaaacatgctgt
actgatcaccaggatcctgaaggtgctaccagttcctcttacttggccagctcccaagag
gaagattcaggccagagtcttcctacagcccacgttcgcccttcccacccattgaagagc
tttgctgtgccggcaatcccgcccccaggtcctcccacctatgatcccgcgttgccaagc
acaccattactatcccagcaagctctgaaccatcacattcactcggtgaagacagcctcc
attgggactttaggaaggagccggcctcctatgccagtggtggttcccagtgcccctgaa
gtgcaggagaccacgaggatgctggaagactccgagagtagctacgaaccagatgagctg
accaaagagatggcccacctggaaggactaatgaaggacctaaacgccatcacgacagca
tga
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integrated database retrieval system
