KEGG   Lynx rufus (bobcat): 124508392
Entry
124508392         CDS       T08475                                 
Name
(RefSeq) paired amphipathic helix protein Sin3a
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf04350  TGF-beta signaling pathway
lruf04919  Thyroid hormone signaling pathway
lruf05016  Huntington disease
lruf05169  Epstein-Barr virus infection
lruf05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    124508392
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    124508392
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    124508392
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    124508392
  09164 Neurodegenerative disease
   05016 Huntington disease
    124508392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lruf03036]
    124508392
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     124508392
    REST complex
     124508392
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124508392
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress PAH_ZNF598 SPCC191_01
Other DBs
NCBI-GeneID: 124508392
NCBI-ProteinID: XP_046930721
LinkDB
Position
Unknown
AA seq 1274 aa
MKRRLDDQESPVYAAQQRRIPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
NQNGCQIRRHSGTGATPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLARKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKAP
NT seq 3825 nt   +upstreamnt  +downstreamnt
atgaagcgacgtttggatgaccaggagtcaccggtgtatgcggcccagcagcgtcggatc
cctggtagcacagaggcttttcctcaccagcaccgggtacttgcccctgcccctcctgta
tatgaagcagtgtctgagaccatgcagtcagccacgggaattcagtactctgtgacaccc
agctatcaggtttcagcagtgccacagagctctggcagtcacgggcccgccatcgcagcg
gttcacagcagccatcatcacccaacagctgtgcagccccacggaggccaggtggtccag
agtcatgctcatccagccccaccagttgcaccagtgcagggacagcagcagtttcagagg
cttaaggtggaggatgcgctgtcctatcttgaccaggtgaagctgcagtttggtagtcag
cctcaggtctacaatgatttccttgacatcatgaaggaatttaaatctcagagcattgac
actccaggagtgattagtcgtgtgtcccagctgttcaaaggccaccccgacctgattatg
ggcttcaataccttcttgccccctggctacaagattgaggtgcaaaccaatgacatggtg
aacgtgacaactcctggccaggttcatcagatccctacccatggcatccagccccagcct
cagccaccaccccaacatccttcccagccttcagcccagtcagccccagctcctgcccag
ccagctcctcagcccccacctgccaaagtcagcaagccttcccaactacaagcacatact
ccagccagtcagcagactccccctctcccaccatatgcatccccgcgttctccacctgtc
cagcctcatacaccagtgacaatctcattgggaacggccccatccttgcagaacaatcag
cctgtggagtttaatcacgccatcaactatgttaataaaatcaagaacaggttccagggc
caaccagacatctacaaagcattcctggagattttgcacacatatcagaaagagcagcga
aatgccaaggaagctggaggaaactacactccagcattgaccgagcaggaggtgtatgcc
caggtggctcgtctttttaaaaatcaggaagatctgttgtcagagtttggacagttccta
ccagatgccaacagctctgtgcttttaagcaaaaccacagctgagaaggttgattctgtg
agaaatgaccatggaggcactgtgaagaagccccagctgaacaacaagccacagaggccc
aaccagaatggctgccagatccgaaggcactctggaacgggagccacccctccggtgaag
aagaaacctaaactgctcagcctaaaggattcttctatggcagatgccagtaaacatggt
gtaggaaccgagtcgttattttttgataaggtccgaaaggctctgcggagtgctgaggcc
tatgaaaatttcctgcgctgtcttgttatctttaaccaggaggtgatctctcgggctgag
cttgtccagttagtctctcctttcctggggaaattccctgaattgtttaattggtttaaa
aactttctgggctataaggagtctgtacatctggaaacctttccaaaggaacgagccaca
gagggcattgccatggagatagattatgcctcttgtaaacggttgggctccagctatcgg
gccctaccaaagagttaccagcagcccaagtgtacaggacggactcctctctgtaaagag
gttttaaatgatacgtgggtttccttcccttcctggtctgaggactccacctttgttagt
tccaagaaaacccagtatgaagaacatatctatcgttgtgaagatgaacgctttgagctt
gatgtagttttagagaccaatctggcaacgatccgggttctggaagcaattcagaagaag
ctctctcgcttgtctgctgaggaacaagccaaatttcgcttggacaacacccttgggggc
acatcagaagttattcatcgaaaagcactccagaggatatatgctgataaagcagctgac
atcattgacggtctgaggaagaacccctccatcgctgtcccaattgtccttaaaaggttg
aagatgaaagaggaagaatggcgggaagctcagagaggctttaacaaggtgtggagagag
cagaatgagaagtactacttgaagtctctggaccaccagggcatcaactttaaacagaat
gacaccaaggtcctgaggtctaagagtttactcaacgagattgagagtatctatgatgag
aggcaggagcaggctacagaagaaaatgccggtgtacctgtcggcccacacctctcgctt
gcctatgaagacaaacagatcctggaagatgccgctgctttgattatccaccatgtgaag
aggcagacgggcattcaaaaggaggacaagtataaaatcaagcaaatcatgcatcatttc
attccagatctgctctttgctcagagaggtgatctctcggatgtggaggaagaggaagaa
gaagagatggatgtagatgaagccacaggggcagctaagaagcacaatggtgttgggggc
agtccccctaagtctaagctactgtttagtaacacagcagctcagaagttaagagggatg
gatgaagtatacaacctcttctatgttaataacaactggtatatctttatgcgactgcac
cagattctctgcttgcggctgctgcggatttgttcccaagctgaaagacaaattgaagaa
gaaaaccgagagagagagtgggaacgggaagtgttgggcataaagcgagacaagagtgac
agtcctgctatccagttgcgtctcaaagaacctatggatgttgatgtagaagattattac
ccagctttcctggacatggtgcggagcctgctagatggcaacatagactcgtcacagtac
gaagattcgctgagagagatgttcaccattcacgcctacattgccttcaccatggacaaa
ctaatccagagcattgtcagacagctgcagcacattgtgagtgacgagatctgtgtacag
gtgactgacctttacctggcagaaaacaataatggggccacaggaggccagctgaacaca
cagacctccaggagtctcctggagtcaacgtatcagcggaaggctgagcaactcatgtca
gatgagaattgctttaagcttatgtttattcagagccaaggccaggttcagctgaccatt
gagctcctggacacagaagaggagaactcggatgaccctgtagaagcagagcgttggtca
gactatgtggagcgatacatgaactctgatactacctctcctgagctgcgtgagcatctg
gcacggaaaccagtatttctcccgaggaatctgaggcggatccggaaatgtcagcgtggt
cgagaacagcaggaaaaggaagggaaggaaggaaacagcaagaagaccatggagaatgtg
gatagcctggataaactggagtgtagattcaagctgaattcctacaagatggtgtatgtg
atcaagtcagaggactacatgtatcggagaactgccttgctccgggctcatcagtcccat
gagcgtgtaagcaagcggctacatcagaggttccaggcctgggtagataaatggaccaag
gagcatgtgccccgtgaaatggcagcagagaccagcaagtggctcatgggtgaggggctg
gagggcctggtgccctgtaccaccacctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatatggcacagtgttcaaagccccataa

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