Lynx rufus (bobcat): 124508479
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Entry
124508479 CDS
T08475
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124508479
Membrane trafficking [BR:
lruf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124508479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
124508479
NCBI-ProteinID:
XP_046930878
LinkDB
All DBs
Position
Unknown
AA seq
1918 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVAVIIKSLGEEVP
RDYICIDVTPTGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDWKERLKQGCEII
QSTPYGRPANISGSTSSQKIYITYRRASENMTQNTLAVTDICIIVPSKGESPPHTFCKVD
KNLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPQEDYESFSLPESVPLFCLPMGAT
IECWPPNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYSEENLTEKQRLLLGLASSADG
KSDSSKTIHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFP
SPQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKIL
IHSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYD
PPPDVSCVDLDTNTISQTGDKKNVAWKILPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGL
MDLAMNDYDFNSGKRLHMIDLEIQEAFLCFMASILKGYRSYLRPITQAPSETATDASSLF
ALQAFLRSRDRSHQKFYNMMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKSGE
MRLIELDESFKSEHTVFVTPPEIPHLPNGEEPPLQYSYNGFPVLRNNLFERPEGFLQTRK
NKLPSKSSSPSSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAY
VKVCHSKVRALKTAYDVLKKMQSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMQKA
GIDPNAITYGYYNKAVLESTWPSRSRSGYFLWTKVRNVVLGVAQFKRALKKHAHLSQTTL
SADGSDLDAISHGSMDSGHGTQTVEQAPFNTGLIKVYATDDRSSTGGQSDLGYNSLSKDE
VRRGDISTEEIQEEKDKKGSDSSSLSESESAKGSADCLPELNYQSSSSIVRPSGTSNNGA
DKISEEGSESTSELLLMSSFEGPNETGKSPSRCFRKRHKSDNEADLQQRLSWGSRERSLS
GGVLVGLVLSRVNQEANPGDMAEKLGADAKILSNVISKSTRPTSLDIGKPPLRSKRDSLE
KESSDDDTPFDGSDCLADKVDSPVIFDLEDLDSETDGSKVGYVASQNPKRIQRLSSSFSV
KPSEKTDVATGFDPLSLLVAETEQQQKGEEEEDDDDSKSVSTPSARRDLAEEIVMYMNNM
SSPLTSRTPSIDLQRACDDKSTGKKSPTLVKACRRSSLPPHSPRPMRLTKSKSYTKTEER
PRDRLWSSPAFSPTCPFREDSQDALTHSSPSFNLDTLLVPKLDVLRNSMFTAGKGVAEKA
SKWYSRFTMYTTSSKDQSSDRTSLSSVGAQDSESTSLTDEDVCQELEGATSSQESSATSG
TKGIDFSRTSLESSASLEGSLSKFALPGKSEVASSCNTSNTNIFQNYAMEVLISSCSRCR
TCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPFLNIEIRDLRRPGRYFLKSSPSTEN
MHFPSSFSSQTRQSCISTSATGLDTSVISVQGNFDLNSKSKLLENTCARSIQIPADRSKT
AVSKCPLFPMARSVSTYGPLDKEDPGGQKLISTGSLPTTLQGATDSLGLEWHLPSPDPIT
VPYLSPLVVWKELESLLENEGDHAITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILS
SEHCNKYSKIPRHCMSEDSKYVLIQMLWDNMKLHQDPGQPLYILWNAHSQNRTLLFETQK
YPMVHLLQKGDNSFNQELLKNMVKSIKMNDVYGPMSQILETLNKCPHFKRQRSLYREILF
LSLVALGRENIDIDAFDKEYKMAYDRLTPSQVKSTHNCDRPPSTGVMECRKTFGEPYL
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagataaggggcctcgtgttgctgactactttgttgtagctggattaactgat
gtttcaaagcctctggaagaagaaattcacttcaatgatgcctgtcataaagtagctaaa
ccaaaagaacctattacagatgttgcagttattattaaatctcttggggaggaagtgcca
cgggattatatctgtattgatgttactccaactggattgtcagctgatctcaataatgga
agtcttgtggggccacagatttacctttgctacagaagaggaagagataagcctccactt
acagatctgggggttttatacgactggaaagaaagattgaaacaagggtgtgaaattatt
cagagtactccatatggacgccctgcaaatattagtggcagtacctcatcacaaaaaatt
tatatcacttaccgaagagcctctgaaaacatgactcagaatacgttggctgtcacagac
atatgtattatcgtacccagtaaaggagaaagcccaccacacacattttgcaaagtcgac
aagaatctcaataacagtatgtggggatcagcagtgtacttatgttataaaaaatcagtg
gcaaagactaacactatatcttacaaagctggtctaatttgtagatatcctcaagaagat
tatgagtctttctcactcccagaatctgttcccctattttgtttaccaatgggtgcaact
attgaatgttggccaccaaatagcaaataccctctccctgttttttctacatttgtgtta
actggagcctcagctgaaaaggtctatggtgctgctattcagttttatgaaccatactct
gaggaaaatctcacagaaaaacagagacttctcttgggtttagcatcatcagcagatggg
aaatctgatagttccaaaacaattcacactaataaatgcatctgtcttctttctcactgg
cctttttttgacgcattcaggaagtttctgacttttctgtatcgttattctatctctgga
cctcatgtccttccaattgagaagcatatttctcattttatgcataaagttccttttcca
tctcctcagaggccgcggattttagttcagttatcaccacatgataatctgattctcagt
caacctgtttcttcacctcttccactaagtggtggcaagttttcaacactacttcaaaat
ttaggccctgaaaatgctgtgacactacttgtgtttgcagtaacagaacataagattctc
atccattccctacgcccttccgtgcttactagtgtgacagaagcattagtgtctatgatt
ttccctttccactggccatgcccatatgttcctctctgcccactggctttagcagatgtc
ttgagtgcaccatgtccattcatagtaggaattgattcaagatactttgatctctatgac
cctccaccagatgtcagttgtgttgacctagacaccaacaccatttctcaaactggtgac
aagaaaaatgtagcctggaagatacttccaaagaaaccatgtaaaaatctgatgaacaca
ctgaataatttgcaccagcagctggcaaaattgcagcagagaccaagagacgatggacta
atggacttagcaatgaatgactatgattttaattctggaaagaggttgcacatgatagat
ttggaaatccaagaggcatttttgtgtttcatggcctctattttaaaaggctatagatca
tacttaagaccaataacacaagccccctctgagacagccacagatgcgtcctctcttttt
gccttgcaagctttcttaagaagccgggaccgatcacatcaaaaattctataacatgatg
accaaaacacaaatgttcattcgcttcatcgaggaatgttcttttgtcagtgataaagat
gcaagcctggcattttttgatgactgtgtagataaagtggatatggacaagagtggtgaa
atgcgacttatagaactggatgaatctttcaaaagtgaacatactgtttttgtaacacca
cctgagatcccccatctacccaatggtgaagaaccccctttacagtacagctataatgga
tttccagttcttagaaacaatttatttgagagacctgaaggatttctacaaacacgaaag
aacaaattgccttcaaaatcaagtagccctagtagcccttctcccatgttcagaagaaca
aaacaggaaattaaatcagcccataaaattgccaagaagtattcttccattccccaaatg
tggtctaggtgtctgttgcgtcactgttacggactatggtttatttgtctgccagcttat
gtgaaagtatgtcattcaaaagtcagggccctgaaaacagcatatgatgtgcttaaaaaa
atgcagtcaaagaagatggatccccctgatgaggtgtgctaccgcattctcatgcagctc
tgtggacagtatgatcagcccgtgcttgcagttcgagtgcttttcgaaatgcagaaagct
ggtattgaccccaatgccattacttatggttattataataaggctgttctggaaagtact
tggccctcaagaagtcgtagtggctattttctttggacaaaagtaagaaacgttgtttta
ggagtagcacagttcaaaagagctttaaagaaacacgcacacttatcacaaacaactctc
tcagcagatggcagtgacctggatgctattagtcatggcagcatggatagtggtcatggg
acacaaactgtggagcaggcaccttttaatacgggtttaatcaaagtatatgctactgat
gatagatctagtacaggtggccagtctgatcttgggtataattcattatctaaggatgaa
gttagaagaggggatatatctactgaagaaattcaagaagaaaaagataagaaagggagt
gattctagttccctatcagagagcgagagtgcaaaaggaagtgctgattgtcttcctgag
cttaattatcaaagttcttccagtatagttcgccccagtggcaccagtaacaatggtgct
gataaaatatcagaagaaggctctgaaagcacatctgagctgctcttaatgtcatccttt
gagggtccaaatgaaacaggaaagagtccaagtagatgcttcaggaaaagacataaaagt
gacaacgaagctgatttgcagcagcgactctcctggggaagcagagagcgcagtcttagc
ggaggagtactggtgggacttgtgctcagtagagtcaaccaggaagcaaatcctggagac
atggccgaaaaactaggagctgatgcaaaaatactttcaaatgtgatctcaaaaagcaca
agaccaactagtcttgatattggaaagccacctttgagatcaaaaagagacagtctagaa
aaggaatctagtgatgacgatacacctttcgatggttccgattgtttggcagataaagtg
gattctcccgtcatttttgatttggaggacttagacagcgaaacagatgggtcaaaagtg
ggatatgttgcttcacaaaaccccaagaggattcagcgtctcagcagcagcttttcagta
aaaccctctgaaaaaacggatgttgccacgggatttgatcccctctcccttttggttgct
gagactgaacagcagcaaaaaggggaggaggaggaggatgacgatgacagcaaaagcgtt
tcaacaccatccgctaggcgtgatttggctgaagaaattgtgatgtatatgaataacatg
agcagtccgttgacgagccgcacgccaagcattgatttacaacgggcatgtgatgataaa
tcaactggtaagaaaagtccaacactggtcaaggcgtgcagaagatccagcttgcctcct
cattctcctaggccgatgagacttaccaaatctaaaagttacacgaaaactgaggagaga
ccaagggacagactctggtcttctccggccttctcacctacttgcccatttagggaagac
tctcaagatgcattaacccattcatcaccttcatttaatttagatacactgctagtacct
aaactagacgttctgaggaacagtatgtttactgctgggaaaggagttgcagagaaagcc
agcaaatggtattcaagattcaccatgtataccacctcatctaaggatcaaagttctgat
cgtaccagtctttcttcagtgggagcccaggattctgaatctacctctttaacagatgaa
gatgtttgccaggagttggaaggagccacttcctcccaagagagcagtgccacttcaggg
actaagggaattgatttcagcagaacaagcctggaaagttctgcctccttagaaggatcc
ctgtcgaagtttgccctacctgggaagtcagaagtggcatcttcctgcaacacaagtaat
acaaatatcttccagaactatgcaatggaggtccttatctcaagttgctctcggtgtaga
acttgcgattgtcttgtccatgatgaggaaatcatggctggctggacagcagatgattca
aatctcaatactacatgcccgttttgtggcaatcttttcttgccttttctgaatattgaa
ataagagatttaagacgacctggaaggtactttctgaagtcaagcccatctacagaaaat
atgcattttccatcctccttttcaagtcagacaaggcagtcttgtatctcaacatcagcc
actggtcttgacacatctgttatctctgttcaagggaattttgatctcaatagcaaatct
aaactgctggaaaatacatgtgcccgaagtattcagatccctgctgatagatcaaaaaca
gctgtgtcaaaatgtccactatttccaatggccaggagtgttagtacttatggccccttg
gataaggaagaccctggagggcagaaactcatttctacaggcagcctgccaactacttta
caaggagctacagattctttaggattagagtggcatctcccaagtccagatcctatcact
gttccctatcttagtcctttagtggtatggaaggaactcgaaagcttattggaaaatgaa
ggtgatcatgccataacagtggcagactttgtggaccatcatccaattgtgttttggaac
ctggtgtggtattttagacgtcttgacttacccagtaatttacctggattgattctttct
tctgagcactgtaacaagtattcaaagattcctcgccactgtatgtctgaagatagtaaa
tatgttttaatacagatgttatgggacaatatgaaattacatcaggatccgggacagccc
ttgtacatcctctggaatgcccacagtcaaaatcgtactcttttatttgagacccaaaag
tatccaatggtccatttattgcaaaaaggtgataattcatttaaccaggaactattgaaa
aatatggtaaaaagcattaaaatgaatgatgtctatggaccaatgagtcagattttagag
accctgaataaatgccctcattttaaaagacagaggagtttatatagagaaatactattt
ctctcgcttgtggcactgggaagagaaaacattgatatagatgcatttgataaagaatac
aagatggcatacgatcgcctcacacctagtcaagtcaagagtacacacaactgtgatcga
ccaccaagtacaggggtgatggaatgtcgaaaaacctttggagaaccttatctttaa
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integrated database retrieval system
