Lynx rufus (bobcat): 124508579
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Entry
124508579 CDS
T08475
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124508579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124508579
04131 Membrane trafficking [BR:
lruf04131
]
124508579
03029 Mitochondrial biogenesis [BR:
lruf03029
]
124508579
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lruf04812
]
124508579
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124508579
mRNA cycle factors
P-body specific factors
124508579
Membrane trafficking [BR:
lruf04131
]
Others
Actin-binding proteins
Myosins
124508579
Mitochondrial biogenesis [BR:
lruf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
124508579
Cytoskeleton proteins [BR:
lruf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
124508579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
nSTAND3
MC7
Motif
Other DBs
NCBI-GeneID:
124508579
NCBI-ProteinID:
XP_046931047
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTKELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASANLPEFKMLRLGNANNFHYTKQGGSPVIEGVD
DTKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVAFTSRDSDSCTIPPKHEPLSIF
CDLMGVDYEEMCHWLCHRKLATTTETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLTRTPAKLTKGRPGQTAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
SDRKQTCKNVLEKLIADKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKKYLRMRKAAIIVQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYIVRRRYKIKRMA
TIVLQSYLRGYLARNRYRKMLREHKAVIIQKWVRGWLARTYYRRSMHAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGIYTSE
TEKLRSDLERLQLSEEEAKIATGRVLSLQEEIAKLRKDLEQTQSEKKSIEERADRYKQET
EQLVSNLKEENTLLKQEKEALNHLIVEQAKEMTETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMVNVPKPGHKRTDSTHSSNESEYTFSSEIAETEDMPLRT
EEPSEKKVPLDMSLFLKLQKRVTELEQEKQVMQDELDRKEEQVLRSKAKEEERPQIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRSPA
MDCHELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDLMEQ
LEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
SIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCSALTTAQ
IVKVLNLYTPVNEFEERVSVAFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFISRV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtccgagctctacacaaagtttgctagagtttggatacctgatcctgaggaa
gtttggaagtcagcagagctgctgaaagattataaaccaggagataaagtcctcctgctt
caccttgaagaaggaaaggatttggaatatcgtctagatccaaagactaaggaactgcct
cacttaagaaaccctgacatacttgtgggtgaaaatgatctcacagccctcagctatctt
catgagcctgctgtgctccacaatctcagagtccgctttattgactccaaacttatctat
acatattgtggtatagtccttgtagctataaatccttatgaacagctgcctatttatgga
gaagatattattaatgcatatagtggtcagaatatgggtgatatggatccacatatcttt
gcagtagctgaagaagcttacaagcaaatggccagagatgaacgaaatcagtccatcatc
gtaagtggagagtctggggcaggaaaaacagtttcagctaagtatgccatgcgatacttt
gcaactgtaagtggttctgccagtgaagccaatgttgaggaaaaggtcttggcctccaac
cccattatggagtccattggaaatgctaagacaaccaggaatgataacagcagccgtttt
gggaagtacattgaaattggttttgataagagatatcgaatcattggtgccaatatgaga
acttaccttttagagaaatccagagtggtattccaggcagaagaggagagaaactatcat
atcttctatcagctttgtgcttcagcaaatttacctgaatttaaaatgctgcgattagga
aatgcaaataactttcattacacaaagcaaggtggcagtcctgtgattgaaggagttgat
gataccaaggagatggcacataccaggcaggcctgcactttgctaggaattagtgagtct
tatcagatgggaattttccgaatacttgctggcatccttcacttaggcaatgttgcattt
acatcccgggattcagacagctgcacaatacctcccaagcatgaacctctcagcatcttc
tgtgaccttatgggtgtggactatgaagagatgtgtcactggctctgccatcggaaactg
gctaccaccacggagacatacatcaaacccatatccaagctgcaggccacaaatgcccgt
gatgctttggccaagcacatttatgccaagctctttaactggattgtagatcatgtcaat
caagccctccattctgctgtcaaacagcactcttttattggagtgctggacatatatgga
tttgaaacatttgaaataaatagttttgaacagttttgcataaattatgcaaatgaaaaa
ctacagcaacaattcaatatgcatgtcttcaaattagaacaagaagaatatatgaaggaa
caaattccatggacactcatagatttttatgataatcagccttgcattaatcttatagaa
tctaaactaggtattctagatttgctggatgaggaatgcaagatgcctaaaggtacagat
gacacttgggcccaaaaattgtacaacacacatttgaacaaatgtgcactctttgaaaag
ccccgtctgtcaaacaaagctttcatcatccaacattttgctgacaaagtggaataccag
tgtgaaggctttctggaaaagaataaagacactgtttttgaagaacaaattaaagttctg
aaatcaagcaagtttaagatgctaccagaactatttcaagatgatgagaaggccatcagt
ccaacctcagccacctcgtcagggcgcacgcccctcacccgcactcctgcaaaactgacc
aaaggtagaccaggccagacagccaaagagcacaagaaaacagtggggcaccagttccga
aactcccttcacctgcttatggagaccctcaatgccactacccctcactatgtgcgctgt
attaagcccaatgacttcaagttcccattcacgtttgatgagaagagggcggtgcagcaa
ctgagagcatgtggtgtcctggaaaccatccgcatcagtgcagcaggcttcccctcacgg
tggacttaccaagaatttttcagtcgctaccgtgtcctaatgaagcaaaaggatgtgctg
agtgacagaaagcaaacatgcaagaatgtattagagaaactgatagcggacaaggacaaa
taccagtttggtaagacaaagatctttttccgtgctggtcaagtagcctatctagaaaaa
ttgagggcggacaagctgagggctgcctgcatccggatccagaagaccatccgagggtgg
ctgctgcggaagaagtacctgcgcatgcggaaggcggccatcattgtgcagagatacgtg
cggggctaccaggcccgatgctatgctaagttcctgcgcagaaccaaggcagcaaccatc
attcagaaatactggcgcatgtacatagtccgcaggagatacaagataaaacgaatggcc
actattgttcttcagtcttatttgcgaggctacttggccagaaataggtaccgcaagatg
ctccgtgagcacaaagcagttatcattcagaagtgggtccggggctggctggctcgtacc
tactacaggaggagtatgcatgccatcatctatcttcagtgctgcttccggcggatgatg
gccaagcgtgagctaaagaagctcaagatcgaggcccgctctgtggagcgctataagaag
ctccacatcggcatggaaaacaagataatgcagctacagcgcaaagttgatgagcagaac
aaagactacaaatgcctcatggagaaactgaccaatctggaaggaatatacacctctgag
actgagaaactacgaagtgacttggagcgtcttcaactaagtgaggaggaagctaagatt
gctactggacgggtcctcagtctgcaggaagaaattgccaagctccggaaagacctggaa
caaactcagtcggagaaaaaatccattgaggagcgtgcagataggtacaaacaggaaact
gagcagctggtatcaaatctgaaggaagaaaatactttgctgaagcaggaaaaagaggcc
ctcaatcatcttatcgtggagcaggctaaggagatgacagagactatggagaagaagtta
gtagaagaaacaaaacaactggaactcgatcttaatgatgaaaggctgagatatcagaac
cttctgaatgagttcagtcgcttagaagaacgatatgatgacctcaaggaagagatgact
ctgatggtaaatgtgcctaagcctggacacaagagaacagactccactcatagcagcaat
gagtctgaatacacctttagctctgaaattgcagaaactgaagatatgccattgaggaca
gaggagccaagtgagaagaaggtacctctggacatgtcattgttcctcaagctccagaag
cgggtcacagagctggagcaggagaagcaggtgatgcaggatgagctggaccgcaaggag
gagcaggtgctccgcagcaaggcaaaggaagaagaaagaccacaaattagaggcgcagaa
ctggaatatgagtcactcaagcgccaagagcttgaatcagaaaacaaaaaactgaaaaat
gagctaaatgagttacgcaaggcacttagtgagaaaagtgccccagaggtgaccgctcca
ggtgcaccagcctaccgtgtcctcatggagcagctgacctctgtgagtgaggagctcgat
gtccgcaaggaggaagtcctcatcttgagatctcagctggtgagccagaaggaggctatc
caacccaagaatacaatgacagattccacaatacttttggaagatgtgcaaaaaatgaaa
gataaaggtgaaatagcacaagcatacattggtttgaaagaaacaaacagatcacctgct
atggattgccatgagttgaatgaggatggagagctgtggctggtttatgaagggttaaaa
caagccaacaggctcctggaatcccagctccagtcacagaagaggagccacgagaatgag
gctgaagccctgcgtggagagatccagagcctgaaggaggagaacaaccggcagcagcag
ctgctggcccagaacctgcagctgcccccggaggcccgcatcgaggccagcctgcaacac
gagatcaccaggttgaccaatgaaaatttgtattttgaggaattatatgcagatgaccct
aagaagtatcaatcatatcggatttcactttacaagcggatgattgatttgatggagcaa
cttgaaaaacaagacaagactgttcgaaaactgaaaaaacaactgaaagtatttgccaaa
aaaattggtgaactagaagtgggccaaatggagaacatatccccaggacagatcattgat
gaacccatccgtccggtcaatattcctaggaaagaaaaggatttccaaggaatgctggaa
tacaagaaggaggatgagcaaaagcttgttaagaacctgattctggaactgaagccacgt
ggtgtggcagtcaatttgattccagggttaccagcatatatcctgtttatgtgtgttcga
catgctgactacctgaatgatgatcagaaagtaaggtcattgctaacatcaacaattaac
agcatcaaaaaagtattaaagaaaagaggtgatgattttgaaaccgtctccttctggctc
tctaacacatgccgatttttgcactgtttgaagcagtacagtggagaagagggctttatg
aaacacaacacgtctcgccagaatgaacactgcctcaccaactttgacctggctgagtac
cggcaggtgctaagtgacttagccattcagatctaccagcagctcgtgcgggtgttagag
aacatccttcagccaatgatcgtctctggcatgctggagcatgaaaccattcagggcgtg
tctggggtgaagcccacagggctaagaaagcgaacctccagcatcgctgacgagggcacc
tatacactggactccatcctccggcagctcaactccttccattcagtcatgtgtcagcac
ggcatggaccctgaactgatcaagcaggtggtcaaacagatgttctacattgttggggcc
atcaccctgaacaacctccttctgcggaaggacatgtgctcctggagtaaaggcatgcag
atcaggtacaatgtcagtcaactggaagagtggctgcgtgacaagaatctgatgaacagt
ggggctaaagaaaccctggaacctctcattcaggctgcgcagcttttgcaagtgaaaaag
aagacagatgatgacgcagaagccatctgttccatgtgcagtgctttaactactgcccag
attgtcaaagtgttgaatttgtatactccagttaatgagtttgaagaaagagtctctgta
gcatttattcgtactatacagatgcgtttacgagacaggaaagactctcctcagctgctc
atggatgctaaacacatctttcctgtcacctttccttttaacccatcctccctcgcacta
gaaaccatccaaattccagccagcctgggcctgggattcatatcacgggtctga
DBGET
integrated database retrieval system
