Lynx rufus (bobcat): 124508697
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Entry
124508697 CDS
T08475
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04140
Autophagy - animal
lruf04142
Lysosome biogenesis
lruf04145
Phagocytosis
lruf04148
Efferocytosis
lruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124508697
04142 Lysosome biogenesis
124508697
04140 Autophagy - animal
124508697
04148 Efferocytosis
124508697
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124508697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124508697
Membrane trafficking [BR:
lruf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124508697
Hops complex
124508697
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
124508697
NCBI-ProteinID:
XP_046931258
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDARVHKMFLDHTGCHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGTE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAVVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADYCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNFYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNELGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPTKGSARAKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagccc
ggctgccccagcgtgggcatcccccactcggggtatgtgaatgcccagctagagaaggaa
gtgcccatcttcacaaagcagcgcattgactttaccccttctgagcgtatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaggccaacgaacccaaccatgtggagctgggacgcaaggatgatgccagagtt
cacaagatgtttctggaccacactggctgtcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatggacagaaggtacggccactggcacgctggaaaggacag
ctggtggagagtgtgggctggaacaaggcactgggcaccgagagcagcacaggccccatc
ctggtcggcactgcccaaggccagatcttcgaagcagagctctcagccagcgagggtgga
cttttcggccctgccccagatctttacttccgtccattgtacgtactaaatgaagaaggg
ggtccagcgcctgtatgctcccttgaggctgagcggggtcccgatgggcgcggctttgtt
atcgccacaactcgacagcgcctcttccagttcataggtcgagcagcagaggggactgag
gcccagggcttctcagggctcttcgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgagttggcgttctatacccccaagttgcgctctgca
cctcgggccttcgcctggatgatgggggatggcgtgttgtatggagcattggactgtggg
cgccccgattccctgctgagtgaggagcgagtctgggagtacccagagggggtaggtcct
ggggccagcccacctctggctgtcgtcttgacccagttccacttcctgctgctgttggcg
gaccgggtggaggcagtgtgcacgctgacagggcaggtggtgctgcgggatcacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacgggccacctgtgggcc
tacactgagcgggccgtcttccgctaccatgtgcagcgggaggcccgggatgtgtggcgc
acctacctggacatgaaccgctttgacctggccaaagagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaagctgattactgctttcgccagcgtcgttacctg
gagagtgcccgctgctacgccctgacccagagctactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaggctctggccgagttcctgcagcgaaaattggccagtttg
aagccagccgagcgtacccaggccacactgcttaccacctggctgacggagctttacttg
agccggctcggggctctgcagggtgatcctgaggccctgaacttctaccgggaaacacgg
gagcgcttccgggccttcctcagcagcccccgccacaaggagtggctctttgccagccgg
gcctccatccatgaactgcttgccagccatggagacacagaacacatggtgtactttgcc
gtgatcatgcaggactatgagcgagtggtggcataccactgccagcacgaggcctacgag
gaagccctggccgtgcttgctcgccaccgtgaccctcagcttttctataagttctcaccg
atcctcattcgccacatcccccgccagctggtggatgcttggattgagctgggcagccgg
ctagatgcccggcagctcattcctgccctggtgaattatagccagggtggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaatgagctgggcgagactgag
caggccattcataactacctgctgtcgctgtatgcccgaggccagcccgcctcactgctg
gcctacctcgagcaggccggggccagcccgcaccgtgtgcactatgacctcaagtatgcg
ctgcggctctgtgctgagcacggccaccaccgtgcttgtgtccatgtctacaaggtccta
gaactgtatgaggaggctgtggacctggccctgcaggtggatgtggacctagccaaacag
tgtgctgacttgcctgaggaagacgaggaactgcgcaagaaactgtggctgaagattgca
cgacacgtagtgcaggaggaggaagatgtgcagacggccatggcctgcctggccagctgc
cccttgctcaagattgaggacgtgctgcccttctttcctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgctcaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggccacagccagcgcccagcgcatccggcgagatctgcaggagctg
cggggccgctacggcacagtggagccccaggacaaatgcgctacctgtgacttccccctg
ctcaaccgccctttttaccttttcctctgtggccacatgttccacgctgactgcttgctg
caggccgtgcggcctggcctgccggcctacaagcaggcccggctcgaggagctgcagcga
aagttgggggctgctccagcccctaccaagggctctgcccgcgcaaaggaggccgagggt
ggggctgccgctgggggacccagtcgggaacagctcaaggctgacctagatgaactggtg
gccgctgagtgtgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctatgaggaggagcacctcagttggctgtag
DBGET
integrated database retrieval system
