Lynx rufus (bobcat): 124508771
Help
Entry
124508771 CDS
T08475
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124508771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124508771
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124508771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
124508771
NCBI-ProteinID:
XP_046931371
LinkDB
All DBs
Position
Unknown
AA seq
2591 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQEGGGGDVGN
SSASDLVPPPDETAPTELPKESTAPAPESLTLHDYTTQPVSQEQPAQPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSSSAGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSS
QPQPPPPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPLKVVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASSAPHTGGKIGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSVFNVSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWI
RKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWF
PVVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEH
RVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQ
QPGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARR
EKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVA
MCRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLAL
CQPPGPELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGA
PAPPLSRCSTPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVA
RSRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSS
SSTDESEDEKEEKLTADQSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRA
SEWPKDRVLINRIDLVCQAVLSGKWPSSRRSQEMVTGGILGPGNHLLDSPSLTPGEYGDS
PVPTPRSSSAASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLM
ANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDA
PRRAELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGVEPVQTANSRN
GKKGHHAETVFNRVLPGPIAPDSSKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSS
SGLQSVSSLGHSSAASASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGL
RATGFPSSPATTTSGTALRLPPLQPEEDEDDEDEDDDDDLSQGYDSSERDFSLIDDPMMP
ANSDSSEDADD
NT seq
7776 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagcttcaaccaggtcacacaagaccccattgaggaagcccttggactgcca
agctctctggactccttggatcagatgaaccaggaaggtggaggtggtgatgtggggaat
tcatcagcaagtgacctggtccccccaccagatgagacagcccccacagaacttcccaaa
gaatcaacagctccagctccagaatctttaactttgcatgattataccactcagcccgtc
agccaggagcagccagcccaacctgtattacagacaccgacgccaacatcaggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctcttccagtagtgctggagggcaaccacctcagtcagcccctaagattgtt
atccttaaggccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctggtggctggcacagccaatggtggaaaagtt
acttttaccaaagtgctaaccggcactccccttcgaccaggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctacagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcgaaacgcatcaccctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcatgtcgttctagggagtctaccaggcaagatagtgttacagggcaaccag
ctggcagccctgactcaagccaagaatgctcaggggcagcccgccaaagtagtaactatc
cagctgcaggtgcaacagccacagcagaaaatccagatcgtaccacagcctccatcatca
cagcctcagccaccgccaccaccctccacccagccagtgacactctcctctgtgcagcag
gctcaaataatggggccgggacagagcccagggcaaagactttcagtaccgctcaaggtg
gtgctgcagccacaggctggttcttcccaaggggcctcttctgggctgtccgtagttaaa
gttctaagtgccagtgaagtggcagctctgtcttcaccagcaagctctgctcctcatacg
gggggcaagataggaatggaggaaaaccgcaggctggagcaccagaagaagcaagagaag
gcaaatcggattgtagcagaggctattgctagggcccgtgcccggggtgagcagaacata
cctcgagtcctaaatgaggatgagttgcccagtgttcggcctgaggaagaaggtgaaaag
aaacgcaggaagaagagcagtggggagaggctcaaggaagaaaagccaaagaagagcaaa
acatcgggtacctccaaaactaagggcaagagtaagctgaacaccatcacccctgtggtg
ggtaaaaagagaaagcgtaatacttcatctgataattcagatgtagaagtcatgcctgcc
cagtcaccccgggaagatgaagaaagcagcattcagaagagacgctcaaaccgccaagtt
aagcgaaaaaaatacacagaggatctggatataaagatcacagatgatgaagaagaagaa
gaagtggatgtaactggtccaataaaaactgagcctatcctccctgaaccagtgcaggaa
ccagatggcgagactttgccttccatgcagttctttgtggagaatcccagtgaagaagat
gcagccatagtagacaaagtgctttccatgcggattgtgaagaaggagcttccttctgga
caatatactgaagcagaagaattctttgtcaagtacaagaactactcctatctgcactgt
gaatgggctaccatctcccaactagagaaggataagagaatccatcaaaaactaaagcgc
ttcaaaaccaaaatggctcagatgagacacttcttccatgaggatgaagagcccttcaat
cctgactatgtagaggtggataggatattggatgagtctcacagcattgacaaagacaat
ggggagcctgtaatttactacctggtgaaatggtgctctctgccctacgaggatagtacg
tgggagctgaaagaggatgttgatgagggcaagattcgagaatttaaacggatccaatca
aggcacccggaactcaaaagagtgaatcgtccacaggcaagtgcctggaagaagttagag
ctttcacatgagtataaaaacagaaaccagttacgggaatatcaattggaaggggtcaac
tggctgctctttaattggtataacaggcaaaactgcatcctggctgatgagatgggattg
ggcaaaactatccagtccattgcctttttgcaggaggtatataatgtgggcattcacgga
cccttcctggtcattgccccactgtccacaattactaactgggagcgagaattcaatacg
tggacagaaatgaacactattgtataccatggcagtctggctagccgtcagatgattcag
caatatgaaatgtactgcaaagattcacgggggcgcctcatcccaggtgcatacaagttt
gatgccctgatcaccactttcgagatgattttgtcagactgtcctgagcttcgtgagatt
gaatggcgttgtgtcatcattgatgaggcccatcggctgaagaaccgtaactgcaagctg
cttgatagcctcaagcacatggacttggaacacaaagtgttactcacaggaacaccattg
caaaataccgtggaggaactgtttagcttgcttcatttcttggaaccttcacagtttcct
tcagaatcagagttcctcaaggactttggggatctcaagacagaggaacaggttcaaaag
ctacaggccattctcaagccaatgatgctgagaagactcaaggaggatgttgaaaaaaac
ctggcacccaaacaggaaactattattgaagtagagctgaccaacatccagaagaaatac
taccgggctattttggagaagaatttctccttcctttccaaaggggcaggtcacactaac
atgcctaatctgctcaatacaatgatggagttgcgcaaatgctgcaaccacccatatctc
atcaatggtgcagaagaaaaaatcctgacagaatttcgagaagcttgccatattatacct
catgacttccacttgcaggccatggttcgttcagctggcaaattggttcttattgacaag
ttgcttccaaaacttaaagctggtggccataaggttctgatcttctcccagatggtacgc
tgtctagatatcctagaggattatctaattcagaggaggtacctatatgagcgtattgat
gggagagtcagaggtaaccttcgacaggcagctattgaccgcttcagcaagcctgactca
gaccgttttgtctttttgctatgcacccgggctggtggacttggtattaatctcacagct
gctgatacctgcatcatctttgattcagactggaatccacaaaatgacctgcaggcgcag
gcacgatgtcatcgaattgggcagagcaaagctgtgaaggtgtaccgtctcatcactcgt
aattcttatgagagagagatgtttgataaggctagccttaagttgggattggataaagct
gtgcttcagtccatgagtggtcgggatggcaacattactggaatccagcagttctccaag
aaagagattgaagatctcttaagaaaaggagcatatgcagccataatggaagaagatgat
gagggctccaagttttgtgaagaagacattgaccagatcttgttaagacgaaccacaacc
atcaccattgagtctgaaggaaagggttctacctttgccaaggcaagctttgttgcttct
gaaaatagaactgatatttctctggatgaccccaacttttggcaaaagtgggccaaaaag
gctgacctggacatggatctactgaacagcaagaataacttggtgattgacacacctaga
gtacgaaaacagacccggcacttcagcaccctgaaagatgatgacctagtggaattctct
gatttggaaagtgaagatgatgagcggccacgctctcgccgacacgaccgtcatcatacc
tatgggcgcactgactgttttcgggtggaaaagcacctcttggtatatggttggggacgg
tggcgagatatcttgtctcatggacgcttcaagcgacgtatgactgaacgagatgtggag
acaatttgccgggccatccttgtttactgtcttctacattatcgtggggatgaaaatatt
aaaggcttcatttgggacttgattagccctgctgaaaatggcaagacaaaagaattgcag
aatcattcagtctttaatgtctcccctttcccaggtctgtctatccctgtgccacgtgga
cgcaaggggaaaaaagtaaaatcacaaagcacttttgatatccataaggcagattggatc
cggaaatataatcctgataccctgttccaggatgagagttataagaagcatttgaaacat
cagtgtaacaaggtgctattgcgggtacggatgctctattatctaaggcaggaggttatt
ggagaccaggcagagaaggtgttagggggtgccattgccagtgagattgacatatggttc
ccagtagtggatcagctggaggttccaacaacatggtgggacagtgaggctgacaagtcc
ttgctcattggagtctttaagcatggctatgagaaatacaatactatgagggcagatcca
gccttatgcttcctggaaaaggctggtcgaccagatgacaaagccattgcagcagaacat
cgagtattggataatttctctgacatagtagaaggggttgactttgataaggattgtgaa
gatcctgaatacaaaccactccagggtcccccaaaggaccaagatgatgagggtgatccc
ttgatgatgatggatgaggagatctcagtgattgatggagatgaagcccaggtgacccag
cagccaggccatctattctggcctccaggctctgctctgacagctaggcttcggcgccta
gtaacagcttatcagcgcagctacaagagagaacagatgaagatagaggctgcagaacga
ggggaccggagacgacggcgttgtgaggcagccttcaagctaaaagaaatcgcgcggcgg
gaaaaacagcaacgatggacaaggcgtgaacaaactgatttctatcgggtggtgtctacc
tttggtgtggaatatgaccctgataccatgcagttccattgggatcgcttccgtactttt
gcccgtctggacaaaaaaacagacgaaagccttaccaagtacttccatggctttgtggcc
atgtgtcgccaagtgtgtcgccttcccccagcagctggagatgagcccccggaccctaat
ctgttcattgagcccatcacggaggagagggcctcacggactctttaccgtattgagttg
cttcggcgcttacgggaacaagttttatgccatccccttctggaagatcggctggcatta
tgtcagcccccaggtcctgaattgcccaaatggtgggagcctgttcggcatgatggggag
cttctgcgaggggcagcccgacatggggtgagccaaacagactgcaacatcatgcaggac
ccagacttttcttttctggctgcccgtatgaattatatgcagaaccatcaggcaggagca
ccagctccacccctgtcacgctgctctactccactgctccaccagcagtatacctcgcgc
actgcctcaccactgcccctgcgcccagatgctcctgttgaaaaaccacccgaggagaca
gccgcccaggtccccagtctggagagtctgactttaaagctagagcatgaggtggtggcc
aggagccgaccaaccccacaagactatgagatgcgagtagccccctctgatactacccct
ctggtttcccggaatgttccaccagtcaaactggaggatgaggatgattcagactctgag
ctggacttgagcaagctgtcaccatcatcctcttcttcctcatcctcatccagctccagc
tccagcactgatgagagtgaggacgagaaggaagaaaagctaactgctgaccagtcccgc
tcaaagctctatgatgaagagagtctcctgtccctcactatgtcccaagatggattccca
aatgaagatggagaacaaatgacccctgagcttctgctgctacaagaaagacaaagagcc
tctgagtggcccaaggatcgtgtccttataaaccgtattgacctcgtctgccaggctgta
ctctcagggaagtggccttctagccgccggagccaggaaatggtaacaggaggaattttg
gggccaggcaaccacttgctagatagtccctccttgactccaggagaatatggtgactct
ccagtccccacaccacgaagcagcagcgcggcttccatggcagaggaggaagtgtctgca
gtcaccacagcagcagctcagttcacaaaacttcgcagaggcatggatgaaaaggagttt
acggttcagatcaaagatgaggaaggattgaagttaacattccagaagcacaagttgatg
gctaatggagtaatgggagatggacatcctctgtttcataagaagaagggaaacaggaag
aagctagtcgagctggaggtggagtgcatggaagagcctaatcaccttgatgtggacctg
gagacccggatccctgtcatcaataaggtggatggtactttgctggtgggtgaggatgcc
cctcgccgggctgaactggagatgtggttacagggtcatccagagttcgctgttgatccc
cgatttctagcgtatatggaggatcgcagaaaacagaagtggcagagatgtaaaaaaaat
aataaggcggaattgaactgtttgggagtggaacctgtccagacagctaactctaggaac
gggaaaaagggtcaccatgctgaaactgtgttcaaccgggttttgccagggcctattgca
ccagacagcagcaagaagcgggcccgtaggatgcgaccagacctttctaagatgatggcc
ctgatgcagggtggaggcactgggtccctgtctctgcataataccttccaacacagcagt
agtggcctgcagtctgtgtcatctctgggtcacagcagtgccgcttctgcatctttgcct
tttatgccgtttgtgatgggtggtgcagcatcatcccctcatgtagactccagcaccatg
cttcatcaccaccaccaccacccccacccccaccatcaccaccatcaccatccaggcctg
agagccactggcttcccttcttcaccagccactaccacctctggtactgccttgaggttg
ccaccactgcagcctgaggaagacgaggacgatgaggatgaagatgatgatgatgattta
tctcagggctatgatagctcagaaagggacttctcactcattgatgatcctatgatgcca
gccaactcagactcgagcgaagatgctgatgactga
DBGET
integrated database retrieval system
