KEGG   Lynx rufus (bobcat): 124508923
Entry
124508923         CDS       T08475                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03013  Nucleocytoplasmic transport
lruf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124508923
   03015 mRNA surveillance pathway
    124508923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lruf03019]
    124508923
   03041 Spliceosome [BR:lruf03041]
    124508923
Messenger RNA biogenesis [BR:lruf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124508923
Spliceosome [BR:lruf03041]
 Complex C
  Other components
   EJC/TREX
    124508923
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 124508923
NCBI-ProteinID: XP_046931594
LinkDB
Position
Unknown
AA seq 779 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVTRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEIRESEKQQDSQPDEVMDVLEMVESVKNVITEQEVMEINQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPMKENACALEMENEPEEKEEKESEPQPEPVAHLQPLP
QPQPQPEPQLQPEPQPQPQPQPQPQPQPQPQPQLQPQLQSQSQSQSQSQSQTQTQTQTQT
QPQSQPQPQPQSQAVLQPQPLSHPETLPLAVLQPPIQVIQEQGHLLPERKEFPVESVKLT
EVTVESVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSS
GSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS
GLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggcggtcgcggtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtggatgagaatattcgcaagctcactggacgggatccgaatgacgtgaggcctatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcactaggctgggcggggagcgtcggacaagaagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagctttgcagtcttcagttgtagctacctcc
aaagaacgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcactcttcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaaacaagttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttagaacagaaggttgagcttgcgcagctgcaagag
gaatggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagtacatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaaatggaggtcaagatggaggaggaaactgagataagggaaagtgagaagcagcaggat
agtcaacctgacgaagttatggatgtgctagagatggttgagagtgtcaaaaatgtaatt
actgagcaggaggtaatggaaatcaatcaagttgaaagtgtagaaccttcagaaaatgaa
actagcaaagaactggagccagaaatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctatgaaagagaatgcctgtgctctagaaatggaaaatgagcctgaggag
aaagaagagaaagaatctgagcctcagcctgagcctgtagctcacctccagcccctgcct
cagcctcagccccagcctgagcctcagcttcagcccgagccccagccccagccccagccc
cagccccagccccagccccagcctcagccccagccccagctccagccccaactccagtcc
cagtcccagtcccagtcccagtcccagtcccagacccagacccagacccagacccagacc
cagccccagtcccagccccagccccagccccaatcccaagcagtactccaacctcagcct
ctttctcatcctgagactttgccattagctgttttacagccaccaattcaggttattcag
gaacaagggcatttactacctgaaaggaaggagtttcctgtggaatctgtaaaactcact
gaggtgacggtagagtcagtcttaacagtacatccagagagcaagagcaaaaccaaaact
aggagcagaagtagaggtcgagctagaaataaaaccagcaagagtagaagtcgcagcagt
agcagtagtagttccagtagcagctcaaccagtagcagcagtggaagcagttccagcagt
ggcagcagtagcagtcgaagtagttccagtagcagctccagcaccagcggcagcagcagc
agagacagtagcagcagcactactagtagtagtgagagtagaagtcggagtaggggccgg
ggacataatagagatagaaagcacagaaggagcgtggatcggaagcgaagggatacatca
ggactagaaagaagtcacaaatcttcgaaaggtggtagtagtagagatacaaaaggatca
aaggataagaattctcggtccgacagaaagaggtctatatcagagagtagtcgatcaggc
aaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa

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