Lynx rufus (bobcat): 124509207
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Entry
124509207 CDS
T08475
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124509207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124509207
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124509207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
124509207
NCBI-ProteinID:
XP_046931722
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MQQALERALDRAEYVIASAQQRPPKRKGSASGGASLDEKLYDLYVEECGEEPEATEELRS
NVNLLEKLLRRESLPCLVVNLYPGKEGYSLMLEGENGSYSETIRLPYEEGELLEYLDAEQ
LPPALVDLLEKSRVNFFHSGCVIAQVRDYRQCSREPPGYASRHILLRPTMQTLACDVQSM
TSDDQTWTQEDRLLLESQLILATAEPLCLDPSVSVACTANRLLYNKQKMNTGPMKRSFKR
YSAPSLNRQQELSHRPPPPELRVWASCKKSRERQAGLQHDLKISKAGNCVDMWKQRPCDL
AVPSGVDVQKYARGKKSARYDGSPPTAWPAHKVEGDSVLGYEAGGESQTAQLTSVQPPND
PPLSGRRRPCKEARREGQGSPPHSSTDDHPDSVRPGSKTDAGTEAIRSAVLVQRKAKCPA
TASHGSSGPASLSQPPPGKETAQPETASVWSSVLGKGVSHPPLRFRLSWSSGGTRSGNSF
IPVEASGFLKSPAPAPAPAPAPQPPSLSQNSSVDVNRVSMFPAAALSSSSSPQGTLAPPV
TANSQQSPVRVIRVSPLPAATPSTAGSSQTTLAPPVTASSQKPSAKQVTQGSMRPAATLP
TTGSSQRSLALPVTANFQQSSAEVTRVSPLPAATLSTAGSSQTTLAPPVRASSQKPSAKQ
VTQVSMLPAATLPTTGSSQTTLAPPVRASSQKPSVKQVTQVSMCPAATLPTTGSSQTTLA
PPVRASSQKPSAKQVTQVSMCPAATLPTTGSSQTTLAPPVRANSQKPSAKQVTQVSMCPA
ATLPTTGSSQTTLAPPVRPSSQKPSAKQVTQVSMRPAATLPTTGSSQRSLATQVTARSPG
PNIIQLAGPVCGAQALARGSSPGQGSTAGATDPAGIQPGSLPSGARPPNAVRTAAQAASP
VRVQFFLKNASGLKPVTLLELPQGSPPLSAQQQPEQRLYQLIPQEQLQQASASGPWQPVP
RGPGARGPAPPETASPAQQAVVLSLLGQGRGRGRGRGQGSLLQPQAAVLSLLGCAAETQG
RAGPSGPRHTLQLSPASQPWPQQQAQQYRILQHPVAVTTVATQTAQPSWGQRAASQSEVI
EVPSSVVLSIFTLLRSASLELLSSCRSDALVPVKHQLPISLSPSPGMHGIIFCVRECDCF
RAFG
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggctttagaacgagctctggaccgtgcggagtacgtcattgccagtgcccag
cagaggcctcctaaaaggaaaggctcagcgagtgggggcgcatctctggatgaaaaactt
tatgacctgtatgtggaagaatgcggggaagagcctgaggctacggaggaattaagaagc
aacgtgaacttgttggagaagctcctgaggagagagtcgttgccgtgcttagtggtcaac
ctatacccaggaaaggagggatattcgctgatgctcgagggcgaaaatggatcctattcg
gagaccattcgactgccttacgaagaaggggagttgctcgaatacttggatgctgaacaa
ttacctcctgctctggtggatctcctggaaaaatctcgggttaacttttttcactctggg
tgtgtcatagcccaggtacgggactaccggcagtgcagtcgggaacctcccggctacgcg
agcaggcatattctcctgcggccaacgatgcagacgttagcctgcgacgtgcagtccatg
accagcgatgaccagacctggacccaggaagacaggcttttgctggagagccagctgatc
ttagccacggccgaaccgctgtgtcttgatccttctgtatcagtagcctgcactgcaaac
aggctgctctataacaagcaaaagatgaacactggccccatgaaaaggagcttcaagagg
tattctgcaccctccctgaaccggcagcaggagctgtctcatcgtccacctcctcctgag
ctgagagtatgggcctcttgcaagaaaagcagagaaaggcaagcaggtctgcagcacgac
ctcaaaatttctaaagcggggaactgcgtcgatatgtggaaacagagaccctgtgacttg
gccgtaccgtctggagtggacgtgcagaaatacgccagggggaagaagtccgccagatac
gatggctcgccaccgacggcctggccagcccacaaggtagaaggtgattccgtattgggc
tatgaagctggcggtgagtctcagacagcgcagctgacttccgtgcagccgccgaatgac
ccacctttgtctggaagaagaaggccctgcaaagaagccagacgtgagggacaggggtct
cctccgcactcctccacagacgaccatccagacagcgtccggcctggctccaagacggat
gctgggacggaagccattcggtcagctgtcttggtccagcgcaaggccaagtgtcccgcc
accgcgtcacacggctccagtggcccagccagcctcagccagccgcctcccgggaaggaa
acagcacagcctgagacggcgtcggtttggtcttcagtcctggggaagggagtcagccat
ccacctctacgcttcagactttcctggagctcaggagggactcggtcaggcaacagtttc
atcccagtggaggcaagcggcttccttaaatctccagctcctgctcctgctcccgctcct
gctcctcagcccccgagtctttcccagaattcgtctgtggacgtgaatcgagtgagcatg
tttcccgcagccgccctgtccagcagcagctcgccacaaggaaccctggcccccccggtc
acggccaactcccagcagtcccctgtgagagtgattcgagttagcccacttcctgcagcc
acaccgtccaccgccggctcatcacagacaaccctggcccccccggtcacggccagctcc
cagaaaccctctgcgaaacaggtgactcaaggtagcatgcgtcccgcggccaccctaccc
actaccggctcatcacaaagaagcctggccctcccggtcacggccaacttccagcagtcc
tctgcggaggtgactcgagttagcccgcttcctgcagccacactgtccaccgccggctca
tcacagacaaccctggcccccccggtcagggccagctcccagaagccctctgcgaaacag
gtgactcaagttagcatgcttcccgcggccaccctacccactaccggctcatcacagaca
accctggcccccccggtcagggccagctcccagaagccctctgtgaaacaggtgactcaa
gttagcatgtgtcccgcggccaccctacccactaccggctcatcacagacaaccctggcc
cccccggtcagggccagctcccagaagccctctgcgaaacaggtgactcaagttagcatg
tgtcccgcggccaccctacccactaccggctcatcacagacaaccctggcccccccggtc
agggccaactcccagaagccctctgcgaaacaggtgactcaagttagcatgtgtcccgcg
gccaccctacccactaccggctcatcacagacaaccctggcccccccggtcaggcccagc
tcccagaagccctctgcgaaacaggtgactcaagttagcatgcgtcccgcggccacccta
cccactaccggctcatcacaaagaagcctggccacccaggtcacggcccgctcccctggc
cccaacatcatccagctggcgggcccggtctgtggagcccaggctttggcgaggggttcc
agccccgggcagggctctaccgctggggccacagatcctgcgggaatccagcccggcagc
ctgccctcgggagctcggccaccaaatgcagtgcgcactgcagcacaggctgcgtctcca
gtccgcgttcagttttttttaaaaaatgcttcaggcctcaagccggtgactctgctggag
cttccgcaaggttcgccccctttgagcgcccagcagcagccagagcagcggctctatcag
ttgattccacaggaacaacttcagcaagcctccgcttctggtccttggcagccagtgccc
cggggtcccggtgcccgaggcccagcccctccagagacggcctcacctgctcagcaggcc
gttgtcctgagcctcctgggacagggacggggccggggacggggacggggacaggggagt
ttgctgcagccccaggcagccgtgttgtctctgcttggctgtgctgcagagacccaggga
agagccgggccgagcggccctcggcacacgctgcagctgtcccctgcctcgcagccgtgg
ccacagcagcaggcgcaacagtatagaatcttgcagcacccggtggccgtgacaaccgta
gccacccagacggctcagccttcttggggccagcgggccgcgagccagtccgaagtgatc
gaagtgcccagttcagtagtgctcagtatattcacactgctgcgcagcgcgtctctagaa
ttgctttcatcctgcagaagcgacgctcttgtccccgtcaagcaccagctccccatttcc
ctgtcccccagcccaggcatgcacggtatcattttctgtgtccgcgagtgtgactgcttt
agagccttcggataa
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