Lynx rufus (bobcat): 124509298
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Entry
124509298 CDS
T08475
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03008
Ribosome biogenesis in eukaryotes
lruf03013
Nucleocytoplasmic transport
lruf03015
mRNA surveillance pathway
lruf05014
Amyotrophic lateral sclerosis
lruf05164
Influenza A
lruf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124509298
03015 mRNA surveillance pathway
124509298
03008 Ribosome biogenesis in eukaryotes
124509298
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
124509298
05168 Herpes simplex virus 1 infection
124509298
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124509298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124509298
03009 Ribosome biogenesis [BR:
lruf03009
]
124509298
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124509298
mRNA cycle factors
Stress granule specific factors
124509298
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124509298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
DUF6627
Motif
Other DBs
NCBI-GeneID:
124509298
NCBI-ProteinID:
XP_046931763
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MALLRDLGFPVEPPNEERVQIKRMQESQALDPDTRPITPYGTMHRNSISFTISFFKEKGW
GVCIHYLQELKENACFFDVNPQQLSLIFSKPPAADSTGSLHKQPVRTLVTGHCLQATPWC
DVNYFFKALQTMKELWDTLIPLTPSRWHNNTGNSLQRRARCSGIYRRRHNNWSGHVRSGI
DSSSHQQQDGDPATNDSRMSTRGRYAPYAIPSCHWRGSFQIQDQTQANMEGEQKRPETRM
EGEKQDETSRSWFKITIPFGIRYDEKWLLNLIQKQCSVPFTPVEFHYEKMQAQFFVENAG
IAFALKSVNGKIWNENNEMISIFVHPSDAPQSVQKELKPENVDQIKLTTNKRYVVSXQSL
NIQRVRFAPDMVTRDIEMVPNPRNSMAASRQTHEKNMFKSAGELDKGKRLQREDMSANRS
PLCTTFPDKSTNISSILELFSKLLCLDGQESPSPTSVGIAAHKRLPTCKGSFFGSDALKS
LVLQFLQQYYLIYDSGDRQGLLSAYHDEACFSLTIPFNPKEPAPSSLCEYLKESRNMKKV
QDPYLRVQLLKHTKHDIVHSLCVLPKTQHDLSSFVVDIWFQMDLMLCFSVNGVFKEVEGM
SQDSVRAFTRTFIANPVNNYSLSIVHDYLFARDTRLKDTQNAFPITVPTPSCISCPTPFP
EAAGNGAYFHNPVWNELPVVSKKLLGVIIFIFISFVVFLLLSEYIPVTEREVYMQQEAKF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctgagggatttggggtttcccgtggagcccccaaatgaagagagagtgcag
ataaagaggatgcaggaatcacaagcccttgacccggacaccagacccattacaccctac
gggaccatgcaccggaattccatcagcttcaccatcagcttcttcaaagagaagggctgg
ggagtgtgtatccactatctccaggagctcaaagagaatgcatgcttctttgatgttaac
ccgcagcagctttccttgatcttctctaaacctccagctgcagattccacaggttctctt
cataagcagcctgtgaggacattggtgacaggtcactgccttcaggccacaccatggtgt
gatgtgaattacttcttcaaagctcttcagacaatgaaggaactttgggacactttgatt
cctctcaccccctcccgatggcataataacacaggtaactccttacaaagaagagcaaga
tgctcgggtatttaccgacggaggcataacaattggtctgggcatgtccgttctggcatt
gattcttcatcccaccagcagcaagatggagatccagcaacaaatgacagtcgcatgagc
acccgaggaagatatgctccctatgccattccatcctgtcattggagaggcagttttcag
atacaagaccaaacgcaagctaacatggagggagagcaaaagcgtccagagacaagaatg
gagggggagaagcaggatgagacctccaggagctggttcaagatcacaattccatttggc
atcagatatgatgagaagtggctgctgaatctgattcagaagcaatgcagtgtccccttc
accccagtggaatttcactatgagaaaatgcaggcccagttctttgttgagaatgccggc
attgccttcgcattgaagagtgtcaacggcaagatctggaatgagaataatgaaatgata
tctatctttgtccacccctctgatgcaccccagtctgtgcagaaggagctgaagccagaa
aatgtggatcagataaagttgaccacaaacaaaagatatgtagtctcctaacaatctctt
aacatccagagagtccgctttgcccctgacatggtcacccgagatattgaaatggtacca
aatcctagaaacagcatggctgcctcccggcagactcatgaaaagaacatgttcaagtct
gcaggggagttggacaagggcaaaagactgcagcgagaagacatgagtgcaaacagaagt
cccctgtgcaccacctttcccgataagtcaaccaacataagctccatcctggaactgttt
tccaagttattatgcctggatggccaggagtcaccttcaccaaccagcgttggtattgca
gcccacaagaggttaccaacctgcaagggaagcttctttggatctgatgcactgaagagt
ctggtcctgcaattcctgcagcagtactacttgatctatgactctggagaccgtcagggt
ctcctcagtgcttaccacgatgaggcctgcttctccctgaccattcccttcaaccccaag
gagccagccccaagcagcttgtgcgagtacctcaaggaaagcaggaacatgaagaaggtc
caggacccctacctgcgtgttcagctgctgaagcatacaaaacatgacattgtgcactcc
ctctgtgtgctgcccaaaactcagcatgacctcagctcctttgtggtggacatatggttc
cagatggacttgatgctctgcttctctgtcaatggagtgttcaaggaagtggaaggaatg
tctcaggattctgttcgtgccttcacccggaccttcattgctaaccctgtcaacaattac
agtctaagcatcgtgcacgattacctgtttgcgagggacaccaggctcaaggacacccag
aatgcattccctatcacagtgcccacaccttcctgcatctcttgccccacccctttccca
gaagcagcgggaaatggtgcatactttcataacccagtctggaatgaacttccagtagtc
tcaaaaaaactcttgggtgtcatcatcttcatcttcatcagctttgttgtgttcctcctt
ctgtctgagtatatccctgtgactgagcgggaagtttacatgcagcaggaagccaagttt
taa
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