Lynx rufus (bobcat): 124509459
Help
Entry
124509459 CDS
T08475
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lruf01002
]
124509459
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124509459
Enzymes [BR:
lruf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124509459
Peptidases and inhibitors [BR:
lruf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124509459
Ubiquitin system [BR:
lruf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124509459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
124509459
NCBI-ProteinID:
XP_046932046
LinkDB
All DBs
Position
Unknown
AA seq
2559 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNP
HCKFHIYNGTRPCESVSSSVQLPEDELFARSPDPRSPKGWLVDLLNKFGTLNGFQILHDR
FINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPHFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSSSRFSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLATYMESMRLYARDHEDYDPQTVRLGSRYSHVQEVQ
ERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDI
NKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLW
RVVIQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDG
DKDSINCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFIVRFPNQ
GRQVDDLDVWSHTNDTIGSVRRYILNRIKANVAHTKIELFVGGELIDPADDRKLIGQLNL
KDKSLITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHP
RYISFLWQVADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHAKLGESSLSPS
LDSLFFGPSASQVLYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNF
LPNADMETRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPGVEGVNPMTSVNQVTHDQA
VVLQSALQSIPNPSSECMLRNVSIRLAQQISDEASRYMPDICVIRAIQKIIWASGCGALQ
LVFSPNEEITKIYEKTNAGNEPDLEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTF
IIDLLLHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFITLLFTVLGSTARERAKHSGDY
FTLLRHLLNYAYNSNINIPNAEVLLNNEIDWLKRIRDDVKRTGETGVEETILEGHLGVTK
ELLAFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSP
ATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKG
FVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRD
DVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWG
EPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEE
SFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAI
QLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSES
ETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEE
MKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQGDELIRYISELAIT
TRPHQIIMPSAIERSVRKQNVQFMHNRMQYSLEYFQFMKKLLTCNGVYLNPPPGQDHLLP
EAEEITMISIQLAARFLFTTGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFN
VSNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDH
LLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVSLDEGPG
PPIKYQYAELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQNV
ADILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRP
YLDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALF
SNCPVAYQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGY
FLERSHSARMTLAKACELCPEEEPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQNNHVHG
QPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKDQ
NT seq
7680 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccagtaggagggaatgacagccagggccaggctcct
gatggacagtctcagccccccctccaacagaatcagacttcatcgcctgattcttccaat
gaaaattccccggcaactcccccagatgaacaaggtcaaggtgatgctccaccacagctt
gaagatgaggaacctgcatttccacatactgacctggcaaaattggatgacatgatcaat
aggcctcgatgggtggttccagttttgccgaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaaaaaaggccttgatgttaaaagtgaagcatgtcaacgatttttc
agagatgggctaacaatatcattcactaaaatccttacagatgaggcagtgagtggctgg
aagtttgaaatacataggtgtattatcaacaatacgcatcgcctggtggagctatgtgtg
gccaagttatcccaagactggtttccacttctagaacttctctccatggccttaaatcct
cattgcaaattccatatctacaatggtacacgtccgtgtgaatccgtttcttcaagtgtt
cagttgcctgaagatgaactcttcgctcgttctccagaccctcgatcaccaaaaggttgg
ctggtggatcttctcaacaaattcggcactttaaatgggttccagattttgcatgatcgt
tttattaatggatcagcattaaatgttcaaataattgcagcccttattaaaccatttggg
caatgctatgagtttctcactcttcatacagtgaaaaagtactttcttccagtaatagaa
atggtcccacattttttagaaaacttaactgatgaagaactgaaaaaagaagcaaaaaat
gaagccaaaaatgacgctctttccatgattattaaatctttgaagaatttagcttcaaga
gtcccaggacaagaagaaactgtaaaaaatttagaaatatttaggttaaaaatgatactt
agattactgcaaatttcttctttcaacggaaagatgaacgcactgaatgaagttaataag
gtgatatctagtgtatcctactatactcatcgacatggtaaccctgaggaggaagaatgg
ctcacagctgaacgaatggcagaatggatacagcagaacaatatcttatctatagtattg
cgagacagtctgcatcaaccacagtatgtagaaaagctagagaagattcttcgttttgtc
atcaaagaaaaagctctgactttacaagatcttgataatatctgggcagcacaggcgggg
aagcatgaagccattgtgaagaatgtacatgatctactggcaaagttggcatgggatttt
tctcctgaacaacttgatcatctttttgattgctttaaggccagttggacaaatgcaagt
aaaaagcaacgtgaaaagctacttgagctgatacgtcgccttgcagaagatgataaagat
ggtgtgatggcacataaggtgttgaaccttctgtggaatctggcccatagtgatgatgta
cctgtagacatcatggacctggctctcagtgcccacatcaaaatattagattatagttgc
tcacaggaccgtgacacacagaagatccagtggatagatcgctttatagaagaacttcgt
acgaatgacaaatgggtaattcctgcactgaaacaaattagagaaatttgtagtttgttt
ggtgaagcccctcaaaatttgagttcttctcgtttcagtcaaactcagcgaagtccccat
gtattttatcgccatgacttaatcaatcaacttcagcacaatcatgccctagttactttg
gtagcagaaaaccttgcaacttatatggaaagcatgagactgtatgctagagatcatgaa
gactatgacccacaaactgtgaggctgggaagtagatatagtcatgttcaagaagtccaa
gaacggcttaacttccttagatttttattgaaggatggccaactgtggctatgtgctcct
caggcaaaacaaatatggaagtgcttagcagagaatgcagtttacctttgtgatcgtgaa
gcctgttttaagtggtattccaagttgatgggagatgaaccagacttggatcctgatatt
aataaagacttctttgaaagtaacgtgcttcagcttgatccttccctgttaactgaaaac
ggaatgaaatgttttgagagattcttcaaagctgtgaattgtcgagaaggaaaactagta
gcaaaaaggagggcatatatgatggatgatttggagttaataggattagactacctttgg
agggtggtgattcaaagtaatgatgatattgccagcagagctatagatctacttaaagag
atatatacaaaccttggtccaaggctgcaggtcaatcaggtggtgatccatgaagacttc
attcagtcttgctttgatcgtttgaaagcctcttatgacacgttgtgtgttttggatggt
gacaaagacagtattaattgtgcaaggcaagaagctgttcgaatggttcgagtgttaact
gtgttaagggaatatataaatgaatgtgacagtgattatcacgaggaaagaacaattcta
cctatgtcaagagctttccgtggtaaacacctctcttttatagttcgatttccaaaccag
ggcagacaagttgatgacttggatgtatggtctcatacaaatgatacgatcggttcagta
cgacgatacattctcaatcgtattaaagccaatgttgcccatacaaaaattgagctcttt
gtgggtggtgaactgatagatcctgcagatgacagaaagttaattggacaattaaactta
aaagataaatcactaattacagccaaacttacacaaataagttccaatatgccttcaagc
cctgatagctcttctgattcctcaactggatctcctggaaaccatgggaatcattacagt
gatggtcccaatccagaagtggaaagctgtttgcctggggtgattatgtcactacatccc
agatacatctctttcctttggcaagttgcagacttaggtagcagcctaaatatgccgcct
cttagagatggagcaagagtacttatgaaacttatgccgccagatagcacaacaatagaa
aaattaagagctatttgtttagaccatgccaaacttggagaaagcagccttagtccatct
cttgactcgcttttctttggtccttcagcctcacaagtgctatacctaacagaggtagtc
tatgccttgttaatgcctgctggtgcacctctggctgatgattcctctgattttcagttt
cacttcttaaaaagtggtggcctaccccttgtcctgagcatgctaaccagaaataacttc
ctaccaaatgcagatatggaaactcgaaggggtgcttacctcaatgctcttaaaatagcc
aaactgttgctaactgccattggctatggccacgttcgagctgtggcagaagcttgtcag
ccaggtgtagaaggcgtgaatcccatgacatcggtcaaccaagttactcatgatcaagct
gtggtgctacaaagtgcccttcagagcattcctaatccatcatctgaatgcatgcttaga
aatgtgtcaattcgtcttgctcagcaaatatctgatgaggcttcaagatatatgcctgat
atttgtgtaattagagctattcagaaaattatctgggcatcaggatgtggggccctacag
ctagtatttagcccaaatgaggaaatcactaaaatttatgagaagaccaatgcaggcaat
gagccagacttggaggatgaacaggtttgctgtgaagcattggaagtgatgacattatgt
tttgccttgattccgacagccttagatgctcttagtaaagaaaaggcttggcagacattc
attattgacttactgttgcactgtcacagcaaaactgttcgccaggtggctcaggagcag
ttctttttaatgtgcaccagatgttgcatgggacacaggcctctacttttcttcattact
ctgctctttaccgttttggggagcacagccagagagagagctaaacattcaggcgactac
ttcacccttttaaggcatcttcttaattatgcttacaatagtaatattaatatacccaat
gctgaagttcttctcaataatgaaattgattggcttaaaagaattagggatgatgttaaa
cgaacaggtgaaaccggtgttgaagagacgatcttggaaggccaccttggggtaacaaaa
gaattactggcctttcaaacccctgagaaaaagtatcacattggttgtgaaaaaggaggt
gctaatctcattaaagaattaattgatgatttcatcttccctgcatccaatgtttacctg
caatatatgagaaatggagagctgcccgctgaacaagcaattccagtctgtagctcccca
gctaccattaatgctggttttgagttacttgtagcattagcggttggctgcgtgaggaat
cttaaacagatagtagattccttgactgaaatgtattacattggcacagcaataactact
tgtgaagcgcttacagagtgggaatatctgccacctgttggaccccgtccacctaaagga
tttgtggggctgaaaaatgccggtgctacttgttacatgaattctgtgattcagcaactc
tacatgattccctccatcaggaacggtattcttgcaattgaaggcacaggtagtgatgta
gatgatgatatgtctggggatgagaagcaggacaatgagagcaatgttgatccccgagat
gatgtgtttggataccctcaacaatttgaagacaagccagcattaagtaaaacagaagac
aggaaagagtataacattggtgttctaaggcaccttcaggtcatctttggtcatttagct
gcttctcgactacagtactatgtgcccagaggattttggaaacagttcaggctttggggt
gaacctgttaatctgcgcgaacagcatgacgctttagaattttttaattcattggtggat
agtttagatgaagctttgaaagccttaggacatccagctatgctaagtaaagtcttagga
ggttcctttgctgaccagaagatttgccagggctgcccacatagatacgagtgtgaagaa
tcttttacgactttgaatgtagacatcagaaatcaccaaaatcttcttgattctttggaa
caatatgtcaaaggagatttattagaaggtgcaaatgcatatcattgtgaaaaatgcaat
aaaaaggttgataccgtaaagcgcttgctaataaaaaaattacctcctgttcttgccatc
caactgaaacgatttgactacgactgggaaagagaatgtgcaatcaagttcaatgattac
tttgaatttcctcgcgagctggacatggagccttacacagttgcaggtgtcgcaaagctg
gaaggagataacgtaaacccagagagtcagctgatacaacagaatgagcagtctgagagt
gagacggcaggaagcacgaaatacagactcgtgggtgtgctggtgcacagtggtcaagca
agtgggggacattattattcgtatatcattcaaaggaatggtggagatggcgagagaaat
cgctggtataaatttgatgacggtgatgtaacagagtgtaaaatggacgacgacgaagaa
atgaaaaaccagtgttttggtggagagtacatgggagaagtgtttgatcacatgatgaag
cgcatgtcatacaggcgccagaaaaggtggtggaatgcttacatacttttttacgaacga
ctggataccatagaccagggtgatgagttgataagatacatatccgagcttgctatcacc
acaagaccccatcaaattattatgccatcagccattgagagaagtgtgcggaagcagaac
gtgcaattcatgcataaccgaatgcagtacagtttggaatattttcagttcatgaaaaaa
ctccttacatgtaatggtgtttacttaaatcctccaccagggcaagatcacctgttgcct
gaagcagaagaaatcactatgattagtattcagcttgctgctaggttcctttttaccaca
ggatttcacaccaagaaaatagtccgtggctctgccagtgattggtatgatgcattgtgt
attctccttcgtcacagcaagaatgtacgattttggtttgctcacaatgtcctttttaat
gtttcaaatcgcttttctgaatatcttctggagtgccctagtgcagaagtgaggggtgca
tttgcaaaacttatagtttttattgcacatttttccttgcaagatgggccgtgtccttca
cctttcgcatctcctgggccttctagtcaggcttatgacaacttaagcctgagcgatcac
ctactaagggcagttctaaatctcttgagaagggaagtttcagagcatgggcgtcatttg
cagcagtatttcaatctgtttgtaatgtatgccaatttaggtgtggcagagaagacacaa
cttctgaaattgaatgtacctgctacctttatgctcgtatctttagatgaaggtccaggt
cctccaatcaagtaccagtatgctgaattaggcaaactgtactcggtagtgtcacagctg
atccgctgttgcaatgtctcttcaagaatgcagtcttcaatcaatggtaatcctcctctt
cccaatccttttggtgatcctaatttatcacaacctataatgccaattcagcagaatgtg
gcagatattttgtttgtgagaacaagttatgtgaagaaaatcatcgaggactgcagtaac
tcggaggaaactgtcaaattgcttcgtttttgctgctgggagaatcctcagttctcatct
actgtcctcagtgaacttctctggcaggttgcatattcctacacttacgaactccggccc
tatttggatctgcttttgcaaatcttactgattgaggactcctggcagactcacagaatt
cataatgcacttaaaggaatcccagatgaccgagatgggctgtttgacacaatccagcgc
tcgaagaatcactatcaaaaaagagcataccagtgtataaaatgtatggtagctcttttt
agcaattgtcctgttgcttaccagattctgcagggcaacggagatcttaagagaaagtgg
acctgggcagtggaatggcttggggatgaacttgaaagacgaccatatactggcaatcct
caatacacttacaacaactggtctcctccagtgcaaagcaatgaaacatcaaatggttat
ttcttggagagatcacatagtgccaggatgacacttgcaaaagcttgtgaactctgtcca
gaggaggagccggacgaccaagatgcccctgatgagcatgagtcgcctccacctgaagat
gccccgttgtacccccactcacctggatctcagtatcaacagaataaccatgtgcacgga
cagccatatacaggcccagcagcacatcacatgaacaaccctcagagaactggccagcga
gcacaagaaaattacgaaggcagtgaagaagtgtccccacctcagacgaaggatcagtga
DBGET
integrated database retrieval system
