Lynx rufus (bobcat): 124509543
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Entry
124509543 CDS
T08475
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124509543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124509543
03036 Chromosome and associated proteins [BR:
lruf03036
]
124509543
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124509543
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124509543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124509543
NCBI-ProteinID:
XP_046932207
LinkDB
All DBs
Position
Unknown
AA seq
2497 aa
AA seq
DB search
MSCSPSDVLPQANFRSFSSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTEKNS
GSGNNSDMMENSKEEGASSSEKSKSSGSSRSKRKPSIVTKYVESDDEKPLDETVNEDASN
ENSENDITMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIV
SCTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNL
ICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQ
LLQQNKKKIKVDNEKSNKVYDHTPRFSPKKNNSNCNGEEKKLDESCSGTVTYSYSALIVP
KEMIKKAKKLIETTANMNSSYVKFLKQAADNSEISSATKLRQLKAFKSVLADIKKAHLAL
EEDLNSEIQALDAVNKEKNTKEHKVIDAKSETKVRKGEKPCALERKDFSKSEAKLSRKQV
DSEHMDQSIVVQEQRANKSASGEHKKSDKKEEPQYEPTNTSEDLDMDIVSVPSSVPEDIF
ENLETAMEVQSSADNQGDGNSGTEQELENSSVKLSITSKDNRGGIKSKTTAKVTKELYVK
LTPVSLSNSPIKGADCQEVPQDKDGYKSSSLNTKPENCGLGEEKNDNEHLFESEVPLLSE
ESDLRRSPRVKTTPLRRQTETNPATSNSDEENNETVKEKQKLSVPMRKKDKRNSSDSAVD
NPKPNKLPKSKQSEIVDQNSDSDEMLAILKEVSRMSHSSSSDTDINETHTNHEKTLYDLK
SQTGKDDKGKRKRKSSTSGSDYDIKKGKSAKRSIISKKKRQNQSESSNYDSELEKEIKSM
SKIGATKTTKKRVPNKEDYDSSEDETHRKKGMDNQGQKSLKIAQEGSSDDAERKQERENF
SSAEGTVDKDKTIMDLRDRMSKKQQSGVSSDGARLPSGKEESFNSPEDKKVAETKERSKH
LKTKMGKRVQTGLLDIAEKFPKKEQSDESSEDDKKLSKKGTEVKEKKITDLKKNVIKMEQ
QYESSSDSTEKLPEGEEISHFPKGIKQNKNDTTYGEKKRKQIKYKTSEKKDELSDKAEKL
QGKRDSCDSSEDKKSKNGVSSRVKKRCNLPEKSSTKRRDCSSSDTEKYSMKEDGCDSSDK
RLKRIELKERRNLNSKRNTKEVHSGSSSSDGEESSEDNKKLKKQRTSAKKKAVSVKEKMR
NSLRTSTKRKQADISSSSSDIGDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDE
ALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKHNE
GNPGDEEAKHQVNSESDSESEESKKPRYRHRLLRHKLTVSDGESGEEKKMKPKEHKEAKG
RNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRI
KVQEDSSSENKSNSEEDKDEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQN
ALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRN
MVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCD
KLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQED
GGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAM
NSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMV
DVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLT
GVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDS
DETSMSLSSDDYTKKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGDGNVDETG
SNPSVSLKLEESKATSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGD
KVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSR
KKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG
QTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLL
DDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAW
AEYEAEKKGLTMRFNIPTGTNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKV
VEATNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVL
TKQQMLISCVQRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQID
MRGMYQSVAGGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcagcccttctgatgtgcttccacaagcaaacttcaggtctttttcaagtgaa
agcaagttgaatacattggtgcagaagcttcatgacttcctggcacactcatcagaagaa
tctgaagaaacaagttctcctccaagacttgtgatgaaccaaagcacagaaaaaaacagt
ggttctggaaataactcggatatgatggaaaacagcaaggaagagggagctagctcttcg
gaaaaatccaaatcatcgggatcgtcacgatcaaaaaggaaaccttcaattgtgacaaag
tatgttgaatctgatgatgaaaaacctttggatgaaactgtaaatgaagatgcttctaat
gaaaattcagaaaatgatattactatgcaaagcttgccaaaaggtacagtgattgtacaa
ccagagccagtgctgaatgaagacaaagatgattttaaagggcctgaatttagaagcaga
agtaaaatgaaaactgaaaatctcaaaaaacgcggagaagatgggcttcatgggattgtg
agctgcacagcttgtggacagcaggtcaatcattttcaaaaagattccatttatagacat
ccttcactgcaagtacttatttgtaagaattgctttaaatattacatgagtgatgatatt
agccgtgactctgatggaatggatgaacaatgtaggtggtgtgcagaaggtggaaacttg
atttgttgcgatttttgccataatgctttctgtaagaaatgcattttgcgcaaccttggt
cgaaaggagctctctacaataatggatgaaaacaatcagtggtattgctacatttgtcac
ccagaacctttgttggacttggttactgcatgtaatagcgtatttgaaaatttagaacaa
ttgttgcaacaaaataaaaagaagataaaagttgacaatgaaaagagtaataaagtatat
gaccatacacccagattttctccaaagaaaaataattcaaattgtaatggagaagaaaag
aaattagatgaatcatgttctggtactgtaacctactcttattcagcactaattgtgcct
aaagagatgattaagaaggcaaaaaaactgattgagaccacagctaacatgaactccagt
tatgttaagtttttgaagcaggcagcagataattcagaaatcagttctgctacaaagtta
cgtcagcttaaggcttttaaatctgtgttggctgatatcaagaaagctcatcttgcatta
gaagaagatttgaattcagagattcaagctttggatgctgtaaacaaagagaaaaatacc
aaagagcataaagtcatagatgctaaatctgaaacaaaagtacgaaagggagaaaaaccc
tgtgctttggaaaggaaagatttttcaaaatcagaagctaaactgtcaagaaagcaggta
gatagtgagcacatggatcagagtattgtagtacaggaacaaagagcaaataaaagtgcc
agtggtgaacataagaaatctgataaaaaagaagaacctcagtatgaacctactaacact
tctgaagatttggatatggatattgtgtctgttccttcctcagttccagaagacattttt
gagaatcttgagacagctatggaagttcagagttcagcagataatcagggagatggcaat
agtggaacagagcaagaattggagaattcttctgtaaaattaagtattacttcaaaagac
aacagaggaggtattaagtcaaaaactacagctaaagtaacaaaagaattatatgttaaa
ctcacccctgtttccctttctaattcgccaattaaaggtgctgattgtcaggaagttcca
caagataaagatggctataaaagttctagtctgaacaccaagccagagaactgtggactt
ggagaggaaaagaatgataatgagcatttgtttgaaagtgaagttccattactttcagaa
gaatctgatcttcgaagatccccacgtgtgaagactacacccttgaggcgacagacagaa
accaatcctgcaacatctaattcagatgaagaaaataatgaaacagttaaggagaaacaa
aaactatccgttccaatgagaaaaaaggataagcggaattcttctgacagtgctgtagat
aatcctaaacctaataaattgcctaaatctaagcagtcagagattgtggatcagaattcc
gattctgatgaaatgttagcaatcctgaaagaggtatccaggatgagtcacagttcttct
tcagatactgatattaatgaaactcatacaaaccatgagaagactttatatgatttaaag
agtcaaacagggaaagatgataaaggaaaaaggaaacgaaaaagttctacttctggctca
gattatgatattaagaaaggcaaatcagctaaaaggtctataatttctaaaaagaaacga
caaaaccagtctgaatcttccaattatgactcagaattagagaaagagataaagagcatg
agtaaaattggggctaccaaaacaaccaaaaaaagagttccgaataaagaagattatgat
tcttctgaagatgaaacacacaggaaaaaaggaatggataatcaagggcagaaaagtttg
aagattgcacaagaaggatcatctgatgatgctgaaaggaaacaagagagagagaatttc
tcttcagcagaaggcacagttgataaagacaagaccatcatggacttaagagatcgaatg
tctaaaaagcagcagtcaggtgtttcttctgatggtgctaggttgccttcagggaaagag
gagagttttaattctccagaagacaaaaaggttgctgaaactaaagaaaggagtaagcat
ttgaaaaccaaaatgggtaagagagtacagactggattactggacattgctgagaagttc
ccaaagaaagagcaaagtgatgaatcctctgaagatgataaaaagctgagcaaaaaggga
actgaagtaaaagaaaagaaaattacagatttgaagaaaaatgtaattaagatggaacaa
cagtatgaatcatcatctgatagcactgagaaattacctgagggagaagaaatttctcat
tttcctaaaggaataaaacaaaataagaatgacacaacttatggggaaaagaaaagaaaa
caaataaaatataaaacttctgaaaagaaggatgaattatctgataaggctgagaaatta
caggggaaaagagatagttgtgattcttcagaagataaaaagagtaagaatggagtatcc
agtagagtgaagaaaaggtgcaacctgcctgaaaagagttcaacgaagagacgagattgt
tcatcatctgatactgagaaatattccatgaaagaagatggttgtgattcttctgataag
agactgaaaagaatagaactgaaggaaagaagaaatttaaattcaaagagaaataccaag
gaagtacatagtggctcatcatcttctgatggtgaggaaagttctgaagacaataaaaag
ctgaagaaacagagaacttcagctaaaaagaaggcagtcagtgtcaaggagaaaatgaga
aactccctgagaacaagcactaaaaggaagcaagctgacattagttcatcatcttctgat
ataggagatgaccagaattctgtaggtgaggggagcagtgatgaacagaaaattaagcct
gtgaccgaaaatttagtgctgtcttcacatactggattttgccaatcttcaggagatgaa
gccttatctaaatcagtgcctgtcacggtggatgatgatgatgacgacaatgatcctgag
aatagaattgccaagaagatgcttttagaagaaattaaagccaatctttcctctgatgag
gatggatcttcagatgatgaaccagaagaaggaaaaaaaagaactggaaaacacaatgaa
ggaaacccaggagatgaggaagcaaaacatcaagtcaattctgaatcagattcagaatct
gaagaatctaagaagccaagatacagacataggcttttgagacacaaactcactgtgagt
gatggagaatctggagaagaaaaaaagatgaagcctaaagagcacaaagaagccaaaggc
agaaatagaaggaaagtgagcagtgaagattctgaagattctgattttcaggaatcagga
gttagtgaagaagttagtgaatctgaagatgaacaacggcctagaacaaggtctgcaaag
aaagcagagttggaagaaaatcagcggagttataaacagaaaaagaaaaggcgacgcatt
aaggttcaagaagactcatccagtgaaaacaagagtaattctgaagaagataaagatgaa
gaggaagaggaagaggaagaagaagaagatgaaaatgatgattccaagtctcctggaaaa
ggcagaaagaaaattcgaaagattcttaaagatgataagctaagaactgaaacacaaaat
gctcttaaggaagaggaagagaggcgaaaacgtattgctgagagggaacgtgaacgagaa
aaattgagagaggtgatagaaattgaagatgcttcacccaccaagtgtccaataacaacc
aagttggttttagatgaagatgaagaaaccaaagaacctttagtgcaggttcatagaaat
atggttatcaaattgaaaccccatcaagtagatggtgttcagtttatgtgggactgctgc
tgtgaatctgtaaaaaaaacaaagaaatctccaggttcaggatgcattctagcccactgc
atgggccttggtaagactttacaggtggtaagttttcttcatacggttcttttgtgtgac
aaattggatttcagcacagctttagtggtttgtcctcttaataccgctttgaattggatg
aatgaatttgaaaagtggcaggaaggattaaaagatgatgagaagcttgaggtctctgaa
ttagcaactgtgaaacgtcctcaggagagaagctacatgctgcagaggtggcaagaagat
ggtggtgttatgatcataggctatgagatgtacagaaatcttgctcaaggaaggaatgtg
aagagtaggaaacttaaggaaatctttaacaaagctttggttgatccaggccccgacttt
gttgtttgtgatgaaggccatattctgaaaaatgaagcatctgctgtttcaaaagctatg
aattctatacgatcaaggaggaggattattttaacaggaacaccacttcaaaataaccta
attgagtatcattgcatggttaactttatcaaggaaaatttgctgggatccattaaggag
ttcaggaatcgatttataaatccaatccaaaatggtcagtgtgcagattctaccatggta
gatgtcagagtgatgaaaaagcgtgctcacattctctatgagatgttagctggatgtgtt
cagaggaaagattatacagcgttaacaaagttcttgcctccaaaacatgaatatgtgtta
gctgtgagaatgactcctattcagtgcaagctctatcagtactacttagatcacttaaca
ggtgtaggtaatagcagtgaaggtggaagaggaaaggcaggtgcaaaacttttccaggat
tttcagatgttaagtagaatctggactcatccttggtgtttgcagctggactacattagc
aaagaaaataagggatactttgatgaagacagtatggatgaatttatagcttcagattcc
gatgaaacttccatgagtttaagctccgatgattatacaaaaaagaagaaaacaaagggt
aaaaaaggaaaaaaagatagtagctcaagtggaagtggcagtgacaatgatgttgaagtg
attaaagtctggaattcaagatctcgagggggtggtgatggaaatgtggatgaaacggga
agcaatccctcagtttcgttaaagctggaagaaagtaaagctacttcttctaatccaagc
agcccagctccagactggtacaaagattttgttacagatgctgatgctgaggttttagaa
cattctggaaaaatggtacttctctttgaaattcttcgaatggcagaggaaattggggat
aaagtccttgttttcagccagtctctcatatctctggacttgattgaagattttcttgaa
ttggctagtagggaaaagacagaagataaagataaacctcttatttacaaaggtgaaggg
aagtggctgcgaaacattgactattaccgtttagatggttctactactgcacaatcaagg
aaaaaatgggctgaagaatttaatgatgaaactaatgtgagaggacgattgtttatcatt
tccaccaaagcaggatctcttggaattaatctggtagctgctaatagagtgattatattt
gatgcttcttggaatccatcttatgacattcagagtatattcagagtttatcgctttgga
caaactaaacctgtgtatgtatataggttcttagctcagggaaccatggaagataagatt
tatgatcgtcaagtaactaagcagtcactatcttttcgagttgttgatcagcagcaggtc
gagcgtcattttaccatgaatgagcttactgaactttatacttttgagccagacttatta
gatgaccctaattctgaaaaaaagaagaagagagatactcctatgctgccaaaggacacc
atacttgcagaacttcttcaaatacataaagaacacatcgtaggatatcatgaacacgat
tctcttttggaccacaaagaagaagaagagttgactgaagaagaaagaaaagcagcttgg
gctgagtatgaagcagagaagaagggactgaccatgcgtttcaacataccaactgggacc
aatttaccccctgtcagtttcaactctcaaactccttatattcctttcaatttgggagcc
ctgtcagcaatgagtaatcaacagctggaggacctcattaatcaaggaagagaaaaggtt
gtggaagcaacgaacagtgtgacggcagtgaggattcagcctcttgaagatataatttca
gctgtatggaaagaaaacatgaatctctcagaggcccaagtacaggcgttagcattaagt
agacaagccagtcaggagcttgatgttaaacgaagagaagcaatctacaatgatgtattg
acaaaacaacaaatgttaatcagctgtgttcagcgaatacttatgaaccgaaggctccag
cagcagtacaatcagcagcaacaacaacaaatgacttatcaacaagcaacactgggtcac
ctcatgatgccaaagcctccaaatttaatcatgaatccttctaactaccagcaaattgat
atgagaggaatgtatcagtcagtagctggtggtatgcagccaccaccattgcaacgtgca
ccacccccaatgagaagcaaaaatccaggaccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
