Lynx rufus (bobcat): 124509993
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Entry
124509993 CDS
T08475
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124509993
Transcription factors [BR:
lruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124509993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
124509993
NCBI-ProteinID:
XP_046932600
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSMRSPGSAQLALDGVGTMVNCTVKSEGKRELCHEALQASAAAAEPQPGDPARAPQDGAD
SQAPAQDCSSPESIGCLEPKRPGGSEAASGSQEKLDFNQNLKEVVPAIEKLLSSDWKERF
LGRSSVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQ
MELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQL
ALPIQPIPCKPAEYPLQLLHSPPAPVVKRPGAVAAHHPLQEPSQPLNLTAKPKAPELPNA
SSSPSLKMNCGPRPPSHGAPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHGHSGTL
ESSPSTPFRKDLISLDTSPAKERLEESCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRPM
NAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKY
PDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQMSSSDVLYPR
VAGVPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEAAEDRHSVADGEMYRYSEDEDSE
GEEKSDGELVVLTD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccctggctctgcccagctggccctggatggcgttggcaccatggtg
aactgcaccgtcaagtcagaagggaagagggagctctgccacgaggccctccaggcctca
gccgctgccgctgaaccccagccgggagacccagcccgggctccccaggatggtgctgac
tcccaagctccagcccaggactgcagctccccggagagcattgggtgtctggaacccaag
agaccgggaggttctgaggctgcttctggaagccaggagaagctggacttcaaccaaaat
ttaaaagaagtcgtgccagccatcgagaagctgctgtccagtgactggaaggagaggttt
ctgggaaggagctctgtggaaaccaaagatgtgaaagggacccaggagagcctggcagag
aaagagctccagctcctggtcatgatccaccagctgtctaccctgagggaccagctcctg
acggcccattcagagcagaagaacatggctgccatgctgttcgagaagcagcagcagcag
atggagctggcccggcagcagcaggagcagatcgccaagcagcagcagcagctgattcag
caacaacataagatcaacctcctccagcaacagatccagcaggtcaacatgccttacgtc
atgatcccggccttccccccaagtcaccaacctctacctgtcacccccgattcccagctg
gccttgcccatacagcccatcccctgcaaaccagcggagtaccccctgcagttgctacac
agcccccccgccccggtggtgaagaggcccggggccgtggctgcccatcaccccctgcag
gagccctcccagcccctgaacctcacagccaagcccaaggcccccgagctgcccaatgct
tccagctcccccagcctgaagatgaactgtggaccccgcccccccagccatggggccccc
acacgggacctacagtccagcccgcccagtctgccattgggcttccttggtgaaggggac
gctgtcaccaaagccattcaggatgctcgacagctgctgcatggccacagtgggacctta
gagagctcccccagtacccccttccgcaaggacctcatcagcctggacacgtccccggct
aaggagcggctggaggagagttgtgtgcaccccctcgaagaagccatgttgggctgcgac
atggatggctcccgccactttcccgagtcccggaacagcagccacatcaagaggcccatg
aatgccttcatggtgtgggccaaagatgagcgaaggaagatcctccaagccttcccggac
atgcacaactccagcatcagcaagatccttggctcccgctggaagtccatgagcaaccag
gagaagcagccctactacgaggagcaggcgaggctgagccggcagcacctggaaaagtac
ccggactataagtacaagcctcggcccaagcgcacctgcatcgtggagggcaagcggctg
cgggtgggcgaatacaaagccctgatgaggacccggcgccaggacgcccgccagagctac
gtgacccccccccaggccggccagctgcagatgagctcctccgatgtcctgtaccctcgg
gtggcaggcgtgcccctggctcaacccctggtggagcactatgtgccccggagcctggac
cccaacatgcctgtcatcgtcaacacttgcagcctcagggaggagggtgaggccgcggaa
gacaggcactcggtggctgacggcgagatgtaccggtacagcgaggacgaggactcggag
ggcgaggagaagagcgacggggagctggtggtgcttacagactga
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