KEGG   Lynx rufus (bobcat): 124510017
Entry
124510017         CDS       T08475                                 
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
lruf  Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lruf01009]
    124510017
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lruf03036]
    124510017
Enzymes [BR:lruf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     124510017
Protein phosphatases and associated proteins [BR:lruf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124510017
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124510017
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like PHD-1st_NSD Lipoprotein_20
Other DBs
NCBI-GeneID: 124510017
NCBI-ProteinID: XP_046932631
LinkDB
Position
Unknown
AA seq 1544 aa
MEPATALPPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLSTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEETAEARTHNLRRRMGCPTPKCETEREMKSIVKQEPIEKKEYIVESEKEKPKSRS
KKTTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEF
DVELPQLAEMRVRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKAKSLLKARPRHSLTSLATAVKEIEEIPAYLPNGAALKDSVQRARDW
LQDVEALQVGGRVPVLDTLIELVTRGRSIPVHLNSLPRLELLVAEVQAWKECAANTFLTE
NSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPSGKKKSTKLESLSDLERALTESKETAS
AMATLGEARLREMEALQSLRLANEGKLLSPVQDVELKVCLCQKAPAAPMIQCELCRDAFH
TSCVAVPSISQSPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKFVQDRVGSGLLYSRWQASAGQVSETSKGSQPTGTTSFSLPDDWD
NRTSYLHSPFSTGRSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTLLAKPTPAQQT
DRSSPARPSGEKNDCCRGKRDGINSLERKLKRRLEREGLSSDRWDRVKNMRTPKKKKIKL
SHSKDMNNFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggagccggccaccgcgctgcccccgggcccgcgcccggcgctgcccctcgggggcccg
ggcccgctgggcgagttcctgcctccccccgagtgcccggtcttcgagcccagctgggaa
gagttcgcggaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccgccggattggcagccaccatttgcatgtgatgttgacaaa
cttcattttaccccacgtatccagaggctgaatgaattggaggctcaaactcgagtaaaa
ctgaatttcttggaccagattgcaaagtactgggagttacagggaagcactctgaaaatt
ccgcatgtggaaaggaagatcttggacttgtttcagctcaataagttagttgcagaagaa
ggtggatttgcagttgtttgcaaggatagaaaatggaccaaaattgccaccaagatggga
tttgctcctggcaaagctgtgggctcccatatcagagggcattatgagcgaatcctcaac
ccctacaacttattcctgtcaggagacagtttgagatgtctgcagaagccaaacctgagc
acagatacaaaggacaaggagtacaaaccccatgatattccccagaggcagtctgtgcag
ccctcagaaacatgccccccagcccgacgagcaaaacgcatgagagcggaggccatgaat
attaaaatagaaccagaagagacagcagaagccagaactcataacctgagacgacgaatg
ggttgtccaactccaaaatgtgaaactgagagagaaatgaaaagcatcgtcaagcaagaa
cccattgagaagaaagagtacattgtagaaagcgagaaggaaaaacccaagagccgatct
aaaaaaaccaccaatgctgtagatttgtatgtctgcctcttatgtggcagtggcaatgat
gaagaccggcttcttttgtgtgatgggtgtgatgacagttatcacaccttttgcttgatc
ccacctctccatgatgttcccaagggagactggaggtgtcctaagtgtttggcccaggag
tgtagtaagccacaagaggcatttggctttgaacaagcagccagggactataccctccgt
acttttggggaaatggcagatgcgttcaaatctgattatttcaacatgccagtccatatg
gttcccacagaactggttgagaaagaattttggcgactggtaagcactattgaagaggat
gtcacagtagaatatggagccgatattgcctcaaaagaatttggcagtggcttccctgtc
cgagatgggaaaatcaaactttcacctgaagaggaggaatatcttgatagtggctggaat
ttgaacaatatgccagtgatggaacagtctgtccttgctcacattaccgctgatatatgt
ggcatgaaacttccttggttatatgtaggaatgtgcttttcttcattctgttggcatatt
gaagaccactggagctattcgattaactacctgcactggggtgagccaaaaacctggtat
ggagtcccagggtatgctgccgagcagctagaaaatgtaatgaagaaactagctccagag
ctctttgtgtcccagccagatcttctccatcagcttgtgaccatcatgaaccccaatacc
ctgatgactcatgaagtgcctgtttaccgaactaatcagtgtgctggggagtttgtgatt
acgtttccaagagcctaccacagtggttttaatcaaggttttaattttgctgaggctgtt
aacttctgcactgttgattggctgccattaggccgacagtgtgtggagcattatcgtttg
cttcaccgctattgtgtattttcccacgatgagatgatttgcaagatggcttccaaggct
gatgtactagatgtcgtagtggcttcaactgttcagaaagacatggccattatgattgag
gatgagaaagctttaagagaaactgtccgtaaattgggagtaattgattcagaaagaatg
gattttgagctgttgccagatgatgagcgtcagtgtataaaatgcaaaacgacatgcttc
atgtctgccatctcctgttcttgtaaacctggcctgcttgtttgcctgcatcatgtgaaa
gaattgtgttcctgtcccccttataaatataaactgaggtatagatacactctggatgat
ctctaccccatgatgaatgcattgaagcttcgagcagaatcctacaacgaatgggccctg
aatgtgaatgaagctttggaggcaaagattaacaaaaagaaaagccttgtgagctttaag
gctttaattgaggaatcggaaatgaagaaattcccagacaatgatcttttgcgccacctt
cgcctagtcacacaggatgcggagaagtgtgcttctgttgctcagcagctgcttaatggc
aaaaggcaaactagataccgatctggtggaggaaaatcccaaaatcaattgacagtgaat
gaactcagacagtttgtgacacaactgtatgctcttccatgtgtcctcagtcaaacgcct
ttgctaaaggatctcttgaatcgtgtagaagatttccaacagcatagccagaaattgctt
tctgaggagatgcccagtgctgctgagctgcaagacttgctagatgtcagctttgaattt
gatgttgaacttccacagcttgctgagatgcgtgtccgtctggagcaggcccgctggcta
gaagaggtgcaacaagcttgcctagaccccagctcccttacactagatgatatgagacgt
ctcatagacctaggggtgggtctagccccatattcagcagtggagaaagcaatggcccgg
cttcaggagctgcttacggtgtcagagcactgggatgacaaagccaagagtcttctcaag
gccagacctcggcattcattgactagccttgctacagcagttaaggagattgaggagatc
cccgcttatctgccaaatggtgcggctctgaaagactcagtgcagagagccagggactgg
cttcaggatgtagaggccctgcaggttggaggacgtgtgccagtgttagacacactcata
gaacttgttacacgaggccgatctatcccggtacatctgaattctttaccaagactggaa
ttactagtagctgaggttcaggcttggaaagaatgtgctgctaatacattcttgactgag
aattctccatattctcttttagaggtgctgtgtcctcgatgtgacattggccttttggga
ttgaagaggaagcagagaaagttaaaggagcccttgccaagtggaaagaagaaaagcacc
aaattagagagtctgagtgacctggagagagctttaactgaaagcaaagagactgcttcg
gctatggcaacacttggggaagctcgcctaagggaaatggaagccttgcagtctctcaga
ctagccaatgaagggaagttgctgtcacctgtccaagatgtggagctgaaagtctgcctg
tgtcagaaggccccagctgcccctatgatccaatgtgaactctgcagggatgccttccac
actagctgtgtggcagtacccagtatttcgcaaagcccccgaatctggctttgtccccat
tgtcggaggtcagagaaacctccattagagaaaattctgcccctgctggcctccctgcag
cgtatccgagttcgccttcctgagggagatgcacttcggtatatgatcgaaagaaccgtg
aactggcaacacagagcccagcaactgctttcatcagggaatctcaaatttgtgcaagat
cgagtgggctcaggactgttgtatagcagatggcaagcttcagcgggacaagtgtcagag
accagcaagggatctcagcccactggcacaacatccttttctttgcctgatgactgggac
aacagaacctcatatttacactctcccttctctactggacgaagttgtatccccctccat
ggtgttagcccagaagtgaatgagctgttgatggaagctcagctgctccaggtatccctt
cctgaaattcaggaactttaccagactttacttgcaaagccgacccctgctcagcaaact
gaccggagctcaccagctagacccagcggtgagaagaatgactgctgccgtgggaaacga
gatggaatcaacagtcttgagagaaaactgaagagacgcctggaaagagaaggcctctcc
agtgatcggtgggatcgagttaaaaacatgcggacccccaaaaagaagaaaatcaaactg
agccactccaaggacatgaacaatttcaagttagagagggagcgtagctatgaattagtc
cgttctgccgaaactcattccctgccctcagacacatcctattctgaacaggaggactct
gaggatgaagatgccatctgcccagctgtgagctgcctgcagccagaaggagatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcatcaggtctgtgttggtgtt
tctccagagatggcagagaaagaagactacatctgtgtgcgctgtactgtgaaggacgca
ccaagccgaaaataa

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