Lynx rufus (bobcat): 124510165
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Entry
124510165 CDS
T08475
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
lruf05014
Amyotrophic lateral sclerosis
lruf05200
Pathways in cancer
lruf05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124510165
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124510165
09162 Cancer: specific types
05216 Thyroid cancer
124510165
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124510165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124510165
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124510165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
YwqH-like
Imm70
Motif
Other DBs
NCBI-GeneID:
124510165
NCBI-ProteinID:
XP_046932866
LinkDB
All DBs
Position
Unknown
AA seq
2363 aa
AA seq
DB search
MAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVNETRECQSLRLELEKLNNQLKALTEKNKELEVAQDRNIAIQSQFTRTKEEL
EAEKRDLVRTNERLSQELEYLTEDFKRLNEKLKESNATKGDLQLKLDELQASDVSVKYRE
KRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRMEEQM
NGLKMSNENLQKHVEELLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKETLEKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLENALTELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLASTPKRSSTSQTASTPAPVPVI
ESAEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKLQDQITDLRSQNTKISTQLDF
ASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVR
AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSGQ
IEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHHNTKELLKNAQKE
IATLKQHLSNMEVQLASQSSQRTGKGQPSNKEDVDDLLSQLRQAEEQVNDLKERLKTSTS
NVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQD
DKRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQN
KYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERMLKD
EVSKCVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEIL
RFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHE
ELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGM
LQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKA
EIARSNASLTNNQNLIQSLKEDLNKVRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRR
YKTQYEELKAQQDKAMETSAQSSGDHQEQHISVQEMQELKETLNQAETKSKSLESQIENL
QKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAA
KSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREH
QERHLEQRDEPQEPTTKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSK
VTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPV
FGSASGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEV
VQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQVSDDTVEMPLPKKLK
SVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDL
GPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEEDEDDDEDDTG
MGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEG
SAGTAEPSFSQDISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQR
IQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAG
VPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAA
PVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAG
LEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQ
FNRQRGVSHAMGGRGGINRGNIN
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgctgcagcaggtcctggagcgcacggagctgaacaagctgcctaagtcc
gtccagaacaaacttgaaaagttccttgccgaccagcaatccgagatcgatggcctgaag
gggcggcatgagaaatttaaggtggagagtgaacaacaatactttgagatagagaagagg
ctgtcccacagtcaggagaggcttgtgaatgaaacccgagagtgccaaagcttgaggctt
gagctcgagaagctcaacaatcaactgaaggcactaactgagaaaaataaagaacttgaa
gttgctcaggatcgcaatattgccattcagagccagtttacaaggacaaaagaagaatta
gaagctgagaaaagagacttagttagaaccaatgagagactatctcaagaacttgaatat
ttaacagaggattttaaacgtctaaatgaaaagcttaaagaaagcaatgccacaaagggt
gatcttcagttaaaactggatgaacttcaagcttctgatgtttctgttaaatatcgagaa
aaacgtttggagcaagaaaaggagttattacataatcagaatacatggctgaatacagag
ttgaaaactaaaactgatgaacttctggctcttggcagagaaaaaggaaatgagattcta
gagcttaaatgtaatcttgaaaacaaaaaagaagaggtttccagaatggaagaacagatg
aatggcttgaagatgtcaaatgagaatcttcaaaaacatgtagaagagctgttgaccaaa
ctaaaagaggccaaggaacagcaggccagtatggaagagaaattccacaatgaattaaat
gctcacataaaactctctaatctatacaagagtgctgctgatgactccgaggcaaagagc
aatgaactgacccgagcagtagatgaactgcacaaacttttgaaagaagctggagaagcc
aataaagcaattcaagatcatcttctcgaagtggaggaatctaaagatcaaatggaaaaa
gaaacgcttgagaaaataggaaagttggagaaggaattagagaatgcaaatgacctgctt
tctgccacaaaacgtaaaggagccatattatctgaagaagaacttgcagccatgtctcct
actgcagcagctgtagctaagatagtgaagcctggcatgaaattaactgagctgtataat
gcttatgtggaaactcaagatcagttgcttttggagaaactagagaataaaagaattaat
aaatatctagatgaaatagtgaaagaagttgaagctaaagcaccaattttgaaacgccag
cgtgaggagtatgaacgtgcacagaaagctgtggcaagtttatctgttaagcttgaacaa
gctatgaaggagattcaacgattgcaggaggacactgataaagctaacaaacattcatct
gtgcttgaaagagacaatcaaagaatggaaatacaaataaaagatctttcacaacagatt
agagtgcttttgatggaacttgaggaagcaaggggtaatcatgtaattcgtgatgaggaa
gtgagctccgctgatataagtagttcatctgaagtaatatcacagcatctagtgtcttat
agaaatattgaagaacttcaacagcaaaatcaacgtctcttagtggcccttagggaactt
ggggaaaccagagaaagagaggaacaagaaacaacttcatccaaaatcactgagctgcag
ctaaaacttgagaatgccctcactgaattagaacaactccgggagtcacgacaacatcaa
atgcagcttgttgattctatagttcgtcagcgtgatatgtaccgtattttgttgtcacaa
acaacaggagttgccattcctttacaagcttcaagtttagatgatatttctcttgcatca
actccgaaacgttcaagtacatcacagactgcttccactcctgctccggtacctgtaatt
gagtcagcagaggctatagaagcaaaggctgctcttaaacagttgcaggaaatttttgag
aattacaaaaaagaaaaggcagataatgaaaaaatacaaaatgagcagcttgagaaactt
caggatcaaattacagatttgcgatcacaaaacaccaaaatatctacacaactagatttt
gcttctaaacgctatgaaatgttacaagataatgttgaaggatatcgtcgagaaataaca
tccctacatgagagaaatcagaaacttactgcaacaactcaaaagcaggaacagattatc
aatacaatgacgcaagatttgagaggagcaaatgaaaagctggctgttgcagaagtaaga
gcagaaaacttgaaaaaggaaaaggagatgcttaaattgtccgaagtccgcctttctcaa
caaagagagtctttgttagccgaacaaagagggcaaaacttgctgctgactaatctgcaa
acgattcagggaatattagagcgatctgaaacggaaaccaaacaaaggcttagtggccag
atagaaaaactggaacatgagatatctcatctaaagaagaagttggaaaatgaggtggaa
caaaggcatacacttactagaaatctagatgttcaacttttggatacaaaaagacaactg
gatactgagacaaatcttcatcataacacaaaagaactattaaaaaatgctcaaaaggaa
attgctacattaaaacagcacctcagtaatatggaagttcagcttgcttctcagtcctca
cagagaactggcaaaggtcagcctagcaacaaagaagatgtggatgatcttctgagtcag
ctaaggcaagcagaagagcaggtgaatgatttgaaggagagactcaaaacaagtactagt
aatgtggaacagtatcgagcaatggttactagtttagaagaatctcttaacaaggaaaaa
caggtgacagaagaagtacgtaagaatattgaagttcgtttaaaagagtcagctgagttt
cagacacagttggaaaagaagttgatggaagtagagaaggaaaaacaggaacttcaggat
gataagagaaaagccatagaaagtatggaacaacagttatctgagttaaagaaaacactt
aacagcgttcagaatgaagtacaagaagctcttcagagagcaagcacagctttgagtaat
gaacagcaagccagacgtgactgtcaggaacaagctaaaatagctgtggaagctcagaat
aagtatgagagagaattgatgctccatgctgctgatgttgaagctctacaagctgccaag
gaacaggtttccaaaatggcatcagtccgtcagcatttggaagaaacaacccagaaagca
gaatcacagttattggagtgcaaagcatcttgggaagaaagagagagaatgttaaaggat
gaagtttccaagtgtgtgtctcgctgtgaagatctagagaaacaaaaccgattacttcat
gatcagattgaaaaattaagtgacaaggttgttgcctctgtgaaggaaggtgtacagggt
cccttaaatgtctctctaagtgaagaaggaaaatctcaagaacaaattttagaaattctc
agatttatacgacgagaaaaagaaattgctgaaaccaggtttgaggtggctcaggttgag
agtctgcgttatcgtcaaagagttgaacttttagaaagagagctgcaggaactgcaggat
agtctcaatgctgaaagagagaaagtccaggtaactgcaaaaacaatggctcagcatgaa
gaactgatgaagaaaaccgaaacaatgaatgtagtgatggagaccaataagatgctaaga
gaagaaaaagagaggctagaacaggatttacagcagatgcaagcaaaggtaaggaaactg
gagttagatattttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatg
ttgcaagcagagaagaagttactagaagaagatgtcaaacgttggaaagcacgtaaccag
catctagtaagtcaacagaaagatccagatacagaagaatatcggaagctcctttctgaa
aaggaagttcatactaagcgtattcagcagttgactgaagaaattgggagacttaaagcg
gaaattgcaagatcaaatgcatctttgacgaacaaccagaacttaatccagagtctaaag
gaagacttaaataaagtaagaactgaaaaggaaaccatccaaaaggacttagatgccaaa
ataattgacatccaggaaaaagtcaaaactattactcaagtcaagaagattgggcgtaga
tacaagactcagtatgaagaacttaaagcacaacaggataaggccatggagacttcggct
caatcttctggagaccaccaggaacagcatatctcagtccaggaaatgcaggagctcaaa
gaaaccctcaatcaagctgaaacaaagtcaaaatcactggagagtcaaatagagaatctg
cagaagacattatctgaaaaagagacagaagcaagaaatctgcaggaacagactgtgcag
cttcagtctgagctttcacgactccgccaggatcttcaagatagaaccacacaagaggag
caactccgacagcagataactgaaaaggaagaaaaaacaagaaaggccattgtagcagca
aaatcaaaaattgcgcatttagctggtgtaaaagatcagctaactaaagaaaatgaggag
cttaaacaaaggaatggagccttagatcagcagaaagatgaattggatgttcgaatgact
gctcttaagtcccagtatgaaggtcgaattagtcgcttggaaagagaactccgggagcat
caagagagacaccttgagcagagagatgagcctcaagaacctactactaaggtcccagaa
cagcagaggcagatcacattgaaaacaactccagcttctggtgaaagaggaattgccagc
acatcagacccaccaacagccaatatcaagccaactcctgttgtgtctactccaagtaaa
gtgacagctgcagctatggctgggaataagtcaacacccagggctagtatccgcccaatg
gtcacacctgcaactgttacaaatcctactacaaccccaacagctacagtgatgcccact
acacaagtggaatcacaggaagcgatgcagtcagaagggcctgtggaacatgttccagtg
tttggaagtgcaagtggttctgttcgttctactagtcctaatgtccagccttcgatccct
caacccattttaaccgttcagcaacaaacgcaggctacagcttttgtgcaacccacccag
cagagtcatcctcagatagagcctgcaaatcaagagctgtcccccaacatagtagaagtt
gtacagagttcgccagttgagcggccttctacttccacagcagtatttggcactgtttcg
gctaccccaagttcttctttgcctaaacggacacgtgaagaggaagaggatagcaccata
gaagcatcagaccaagtctctgatgataccgtggaaatgcctcttccaaagaagttgaaa
agtgttacccctgtaggaactgaggaagaagtgatggcagaagaaagtactgatggagag
gtagagactcaagtatacaaccaagattctcaagattccattggagaaggagttacccag
ggagattatactccgatggaagacagtgaagaaacctctcagtctctacaaatagacctt
ggaccccttcagtcagatcagcaaacaacaacttcatcccaagatggtcaaggcaaagga
gatgatgtcattgtaattgacagtgacgatgaagaagaggatgatgatgaaaatgatgga
gagcatgaggattatgaagaagatgaggaagatgaggatgatgatgaggatgacacaggg
atgggagatgagggtgaagatagtaacgaaggcactggtagcgcagatggcaatgatgga
tatgaagctgatgatgctgagggtggtgatggaactgatccaggtacagaaacagaagaa
agtatgggtggaggtgaaagtaatcagagagctgctgattctcagaacagtggtgaaggc
agtgcaggtactgcggagccatctttttcccaggacatttctagagaacaacagccatca
tcagcatctgaaagacagactcctcgagcacctcagtctccgagacgccctccacaccct
ctgcccccacgcctgaccattcatgctccacctcaagaattgggaccaccagttcagaga
attcagatgactcggaggcagtctgtaggacgtgggcttcagttgactccaggaataggt
ggcatgcagcagcacttttttgatgatgaggacagaacagttcccagtactccaactctt
gtggtaccacatcgcactgatggatttgctgaagcaattcactccccacaggttgctggt
gttcctagattccggtttgggccacctgaagatatgccacagacaagttcaagtcactct
gatcttggccagcttgcttctcaaggaggtttaggaatgtatgaaacacccctcttccta
gctcatgaagaagagtcaggtggccgaagtgttcccaccacacctctacaagtggcagcc
cctgtgaccgtatttactgagagtaccacctctgatgcttcagagcacgcctctcagtcg
gttccaatggtgacaacgtccactggcactttatccacaacaaatgaaacagcaacaggt
gatgatggagatgaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggc
ctagaaattgatagccagcaggaagaagaacctgttcaggcatctgatgagtcagatctt
ccttccaccagtcaggatcctccttccagttcttctgtagatactagcagtagtcaacca
aagcctttcagacgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcag
tttaacagacagagaggtgtgagccatgcaatgggagggagaggaggaataaatagagga
aatattaattaa
DBGET
integrated database retrieval system
