Lynx rufus (bobcat): 124510839
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Entry
124510839 CDS
T08475
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lruf03037
]
124510839
Cilium and associated proteins [BR:
lruf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124510839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_10
TPR_17
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_5th
TPR-S
TPR_21
ARM_TT21_N
ARM_TT21_C
RPN7
DUF6584
TPR_15
HEAT_Nup120
HAT_PRP39_C
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
124510839
NCBI-ProteinID:
XP_046933477
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQEAVRTSHGRRPPITAKIPSTA
VTRPVATGYGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKAAVRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERILVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
LAPNLKAGFNLILSYFAVGDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEALD
CFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRVRSGRDGGGGSRSRREGSAGSDSGQNCSASSKGERLSAKLRALPGTNEPYESS
SNKEIDASYVDPLGPQIERPKTAARKRIDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctggccccagagacagatgaagatgatctttattctggttat
aacgactacaatccaacctatgacactgaggaattagagaacgacacagcttttcaggaa
gccgtgagaactagtcatggcagaagacctccaataactgctaaaataccaagcacagca
gttactagacctgtagctactggatatgggtccaagacatccctggcatcatcgatggga
agaccaatgacaggggctattcaggatggagttactagaccaatgacagcagtgagagcc
gctggttttaccaaagcagctgtaagaggctctgcatttgacccccttggtcagtcaagg
ggccctgctcctcctttggaagccaaaaatgaagatagtccagaagaaaagattagacaa
ttagagaagaaagtaaatgaattggtagaagaaagctgtattgccaacagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgcaggaagaaaggagagaatcttggtgaga
caacgagaacaagttacaactccagaaaatatcaatttggatttaacttactcggttctt
ttcaacttggccagtcaatattcagcgaatgaaatgtatgctgaagcactaaatacatac
caagttatagtgaaaaataagatgtttagcaatgcaggaagattgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcacta
gatcaaattccaagcgtccataaagaaatgaggattaaaatcatgcagaacattggtgtt
acatttattaaaactggtcaatattcagatgccattaattcatttgagcacataatgagt
ctggcaccaaatctgaaggcaggcttcaacctgattcttagttactttgctgttggagat
cgagacaaaatgaagaaggcgttccaaaaattgattgcggttccattagaaattgatgaa
gatgataaatatatctcaccaagtgatgatccacatactaacttagtaattgaagctata
aaaaatgatcatctaaggcaaatggaacgtgaacggaaagctatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtaattgaaacatcttttgctgtaggttatgat
tggtgtgttgaagttgtgaaagcctctcagtatgtagagctagcaaatgatctggaaata
aacaaagcaattacatacttgagacaaaaggactttaaccaagctgtggagaccttaaaa
atgtttgaaaaaaaggacagtagagtgaaaagtgcagctgcaaccaacctctcatttctg
tattatttggaaaatgaatttgcacaagccagtagctatgcagatttagctgtgaactct
gatagatataatccctcagctctgactaacaaagggaatacagtttttgcaaacggtgat
tatgagaaggcagctgaattctacaaagaggctctaagaaatgattcttcttgtactgaa
gcactttataatattggccttacctataagaggctaaaccggcttgatgaagctttggac
tgtttcctgaaacttcatgcaatcctaagaaacagtgcccaagttctttaccagatagca
aatgtatatgaattaatggaagatcccaatcaagctattgaatggttaatgcaactgatc
agtgttgttccaactgattctagagctctgtctaaactaggagaattatatgatagtgaa
ggagataaatcccaagcatttcagtactactatgagtcatataggtatttcccctctaac
attgaagttattgagtggcttggagcttattacattgacacccagttttgtgaaaaagcc
attcaatactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatg
gtggctagttgttttagaagaagtggtaactaccaaaaagcattggatacttacaaggat
attcacagaaaatttccagaaaatgttgaatgtctgcgcttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgcaacaaaacttaagagattggaaaaaatg
aaagaaataagggaacagcgcgtaaggtctggcagagacggcggcgggggctcccgcagc
agaagggagggcagtgccggcagtgatagtggccagaactgtagtgccagtagtaaaggt
gaacgactaagtgccaaactcagagctttacctgggacaaatgaaccttacgaaagtagc
agtaacaaagaaatagatgcctcctatgtggatccactgggccctcagatagaaaggcca
aaaactgcagcaagaaaaagaattgacgaggatgattttgccgatgaagagttaggagat
gatttgcttccagaataa
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