Lynx rufus (bobcat): 124510875
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Entry
124510875 CDS
T08475
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03030
DNA replication
lruf03410
Base excision repair
lruf03420
Nucleotide excision repair
lruf03430
Mismatch repair
lruf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124510875
03410 Base excision repair
124510875
03420 Nucleotide excision repair
124510875
03430 Mismatch repair
124510875
03440 Homologous recombination
124510875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lruf03032
]
124510875
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124510875
Enzymes [BR:
lruf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124510875
DNA replication proteins [BR:
lruf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124510875
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124510875
MMR (mismatch excision repair)
DNA polymerase delta complex
124510875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
124510875
NCBI-ProteinID:
XP_046933515
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDGKRRAGPGPGVPPKRARGGLWDEDEPSQPSQFEEELALMEEMEAEHRLQEQEEELLQP
ALEGAADGQFSPTAIDARWLRPSPPSLDPQTEPLIFQQLEIDHYVGLAQPLPGAAPPPPG
SVPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGREHLGDLQRELNAAISRDQRGGK
ELAGPAVLSVELCSRESMFGYHGHGPSPFLRITLALPRLLAPARRLLEQGIRVPGLGTPS
FAPYETNVDFEIRFMVDTDIVGCNWLELPAGRYLLRLEGKATHCQLEADVQWSDVVSHPP
EGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGAKVQSYEREEELLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVESFPF
LGRVSGLRSTIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTG
VPLGYLLTRGQQVKVVSQLLRQAMREGLLMPVVKTEGVEDYTGATVIEPLKGYDPVSGWG
WLGASGPDSFPPPLPPSPPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGL
TEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLA
LKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYGTSAKVV
YGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFPYLLISKKRYAGL
LFSSRPDAHDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPAGAVAHAQDVISDLL
CNRIDISQLVITKELTRAASDYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIIGAAKG
VAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCK
TVLTGKVGGLLAFAKRHSCCIGCRTVLGHQGAVCKFCQPRESELYQKEVSHLNALEERFS
RLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcgggcgggcccgggccctggggtgccccccaagcgggcccgtggg
ggcctctgggatgaggatgagccgtctcagccatcccagttcgaggaggagctggcgctg
atggaggagatggaggcagagcacaggctgcaggaacaggaggaggagttgctgcagccg
gccctggagggagccgcggacgggcagttctccccaacggccatagatgcccgctggctt
cgcccctccccgccctccctggatccccagacggagcccctcatcttccagcagttggag
atcgaccattacgtgggcctggcgcagcccctgcctggagcagccccgccaccccccggc
tccgtccctgtcctccgtgccttcggagtcactgatgagggcgtgtccgtctgctgccac
atccacggctttgctccctacttctacaccccggcgccccctggttttgggcgcgagcac
ctgggcgacctgcagcgggagctgaatgccgccatcagcagggaccagcgcggagggaag
gagctcgcggggccggccgtgctatctgtggagctgtgctcccgggagagcatgttcggg
taccatgggcacggcccctccccgtttctgcgcatcaccctggcgctgccgcgcctcctg
gcccccgcccgccgcctcctggagcagggcatccgtgtgccgggcctgggcacccccagc
ttcgcgccctatgagaccaatgtggactttgagatccggttcatggtggacacagacatc
gtcggctgcaactggttggaactcccagcggggagatacctcctgaggctggaggggaag
gccacgcattgtcagctggaggcggacgtgcagtggtctgacgtggtcagtcacccgcca
gaaggggagtggcagcgaattgcgcccctgcgcgtgctcagctttgacatcgagtgtgct
ggccgcaaaggcattttcccggagcctgagcgggaccccgtgatccagatctgctcactg
ggcctgcgctggggtgagccggagcccttcctacgcctggcgctcaccctgcggccctgc
gcccctatcctgggcgccaaagtgcagagctatgagcgggaggaggagctgttgcaggcg
tggtcgaccttcattcgcatcatggaccccgatgtgatcaccggctacaacatccagaac
tttgaccttccatacctcatctcccgggcccagaccctcaaggtggagtcgttccccttc
ctgggccgcgtgtctggcctccgctccaccatccgggactcgtccttccagtccaagcag
accggccggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatggacatgctg
caggtgttactgcgagagtataagctccgctcctacacgctcaacgccgtgagcttccac
ttcctgggcgagcagaaagaggacgtccagcacagcatcatcactgacctgcagaacggg
aacgaccagacacgccgccgcctggccgtgtactgcctcaaggacgccttcctgcccctg
cggctgctggagcggctcatggtgctggtgaacgccatggagatggcgcgcgtcaccggc
gtgccccttggctatctgctcacccgcggccagcaggtcaaggtcgtgtcccagctgctg
cggcaggccatgcgcgaggggctgctgatgcccgtggtaaagacagaaggtgtcgaggac
tacacgggagccacagtcatcgagcccctcaaagggtatgaccccgtgtctgggtggggg
tggctcggggcttccggccctgactccttccctccccccctgcccccctccccccccagg
tactacgatgtccccatcgccacactagacttctcctctctgtacccgtccatcatgatg
gcccacaacctgtgctacaccacactcctgcggcccggggccgcccagaaactgggcctg
acagaggatcagttcatcaagacgcccacaggggatgagtttgtgaagacgtcagtgcgg
aagggcctcctgccccagatcctggagaaccttctcagcgcccggaagagggccaaggct
gagctggccaaagagacagaccccctgcgtcggcaggtgttggatgggcggcagctggcg
ctcaaagtgagcgccaactctgtatacggcttcactggtgcccaggtgggcaagctgccg
tgcctggagatctcacagagcgttaccggctttgggcgccagatgattgagaaaacaaag
cagttggtggagtccaagtacacggtggagaatggctatggcaccagtgccaaggtggtg
tatggtgacactgactcagtcatgtgccgatttggtgtctcttctgtggccgaggcaatg
gccctggggcgggaggctgcggactgggtgtcaggccacttccccccgcctatccggctc
gagtttgaaaaggtctactttccctacctgctcatcagcaagaagcggtacgctggcctg
cttttctcctcccggccggacgctcacgaccgcatggactgcaagggtctggaggctgtg
cgtcgggacaactgccccctcgtggccaacctcgtcaccgcctccctgcgccgtctgctc
atcgaccgagaccccgcgggtgccgtggcccacgcacaggacgtcatctcagacctgctg
tgtaaccgcattgacatctcccagctcgtcatcaccaaggagctgacccgcgcggcctct
gactacgctggcaagcaggcccacgtggaactggccgagaggatgaggaagcgggacccc
gggagcgcgcccagcttgggcgaccgtgtcccctacgtgatcatcggcgctgccaagggc
gtggctgcctacatgaagtccgaggaccccctctttgtgctggagcacagcctgcccatc
gacacgcagtactacctggaacagcagctcgccaagcccctcctgcgcatcttcgagccc
atcctgggcgagggccgcgctgaggctgtgctgctgaggggtgaccacacgcgctgcaag
acggtgctcacgggcaaggtgggcggccttctggcctttgccaaacgccacagctgctgc
atcggctgccgcactgtcctcggtcaccagggggccgtgtgcaagttctgccagcctcgg
gagtcggagctgtatcagaaggaggtgtcgcacctgaatgccctggaggagcgcttctcg
cgcctgtggacacagtgccagcgctgtcagggcagcctgcatgaggacgtcatctgcacc
agccgggactgccccatcttctacatgcgcaagaaggtgcgcaaggacctggaggaccag
gagcagcttctgagacgctttggccctcctggccctgaggcttggtga
DBGET
integrated database retrieval system
