Lynx rufus (bobcat): 124511009 Help Entry 124511009         CDS       T08475                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism lruf  Lynx rufus (bobcat) Pathway lruf03015   mRNA surveillance pathway lruf04530   Tight junction Brite KEGG Orthology (KO) [BR:lruf00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     124511009  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     124511009  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lruf03021]     124511009    03019 Messenger RNA biogenesis [BR:lruf03019]     124511009 Transcription machinery [BR:lruf03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      124511009 Messenger RNA biogenesis [BR:lruf03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      124511009     U7-dependent histone pre-mRNA processing factors      124511009 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Motif Other DBs NCBI-GeneID:  124511009 NCBI-ProteinID:  XP_046933767 LinkDB All DBs Position Unknown AA seq 1273 aa AA seqDB search MAGSSGDSITRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPPQDLIG LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSSSSSTRPGPPQPEETIDFREEGPECET PAIFISMDDDSGLTEAALLDSSLEGPLPKEATGGLTSKEERSPQTLTPAGDDTVKTPSPA AEESGEPETKGNS NT seq 3822 nt NT seq  +upstreamnt  +downstreamnt atggcaggcagcagcggagatagtatcactcgccggagtgtggcatcccagtttttcaca caagaggaggggccgggcatcgatggcatgaccacctcagagagagtggtggatctcctg aaccaggcggcactgatcaccaatgactcgaagatcacagtactcaaacaggtccaggaa ctgatcatcaacaaagatcccacactactggacaacttcctggacgagatcatcgctttc caggcggacaagtcaattgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc aaacgagacattgagttactcctgaaactgatcgcaaacctcaacatgctcttgagggat gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc ctgcagtggatggtgaagtcacgagtcatcagtgagctccaggaggcctgctgggacatg gtgtccgccatggctggtgacatcattctgctgctggattctgataatgacggcatccgc acccacgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggcagac tcggaggtgccccgccgccaggagcatgatatcagcctggaccgcatccctcgtgaccac ccctacatccagtacaatgtgctgtgggaagagggcaaggcagctttggagcagttgctc aagttcatggtgcatcccgccatctcctccatcaacctgaccacagctctgggctccctt gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctacgaaacc ctgcatgccaacctgccccctacgctggccaaatcccaggtgagcagcgtgcgcaagaac ctcaagttgcacctgttgagtgtcctgaagcacccggcctccttggagtttcaggcccag attaccaccctgctggtggacctaggcacacctcaggctgagattgcccgcaatatgccc agcggcaaggatgcccgcaagcggccccgggacgactcggattccacgctcaagaagatg aagttagagcccaacctgggggaagatgatgaggacaaggacttggagccaggcccatcg ggaacctccaaggcctcagcccagatctcaggccagtcagatacagacatcaccgctgag ttcctgcagcctttgctgacacctgacaacgtggccaatctggtcctcatcagcatggtg tacctgcccgaggccatgcctgcctccttccaagccatctatacccccgtggagtcagca ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggctgcg ggactggggccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggaaaag gtggtgaagccagagagtgtcctgattaagcgacgcctgtcggcccagggccaggccatc tcagtggtgggctccctgagctccatgtctactctggaggaggaggcgccccaggccaag aggaggccagagcccatcatccctgtcacacagccccggctggcgggcgctggtgggcgc aagaaaatcttccgtctgagcgatgtgctcaagcccctgaccgacgcccaggttgaggct atgaagctgggcgccgtgaagcggatcctccgggcagagaaggccgtggcctgcagcggg gcggcccaggtgcgcataaagatcctggccagtctggtgacacagtttgactcgggcctg aaggccgaggtcttgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc gcttggctctaccaggagtacaatgcctacctggcagctggtgcctcgggcaccctggac aagtacgaggactgccttatccgcctgctctccggcctgcaggagaagccagaccagaag gatgggatcttcaccaaggttgtgctggaggcaccgctgatcactgagagcgccctggag gtgattcgcaagtactgcgaggatgagagtcgcacttacctgggcatgtctactcttcga gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc agctcccacgagaaggacaaggtgcgttcccaggccctgctgttcatcaagcgcatgtac gaaaaggagcagctgcgagagtatgtggagaaatttgccctcaactacctgcaactcctg gtccaccccaacccgccatctgtgctatttggagctgacaaggacacagaggtggcagcg ccctggaccgaggagacagtaaagcagtgtctgtacctctacctggctctcctgcctcag aaccacaagctgatccacgaactggccgccgtgtacactgaggccatcgctgacatcaag cggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcaccagag ctgctcctgcttgtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg cacagcctcacggacaaagtcccgccctccccggagctggtgaagcgggtccgggatctc taccacaagcgattgccagatgtccgcttcctcatccctgtgctcaatggactggagaag aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcggccttgtccccgctg aaccctggagagctgcttattgcgttgcacaacattgactcggtgaagtgtgacatgaag tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg accgtcatccagtctctgaccatgtacccccgcctgggggggttcgtcatgaacatcctg tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag tgctgtcaacgtaccaagccccagagcttccaggtcatcctgcagttgccaccccagcag ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccga tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc agtggcaagcaggagccagaggccaaggaagtgcccgcggggcccctggaagaggatgac ctggagcccctggccctggccccagccccagccccccggccccctcaggacctcatcggc cttcggctggcccaggagaaagccttaaagcggcagctggaggaggaacagaagctgaag ccgggaggagtgggagccccctcgtcctcctcctcgtcctcctcttcctccacccggcca ggccctccccagcccgaggaaaccatagatttccgggaggaggggcctgagtgtgagacc cccgccatcttcatcagcatggatgacgactcggggctgaccgaggccgcactcctggac tctagtctcgaggggcccctaccgaaggaggcaacaggcgggttgacctcaaaggaggag cgcagcccccagaccctcacccctgccggagacgataccgtgaagacccccagccccgcc gccgaggaatccggggaacccgagaccaaggggaacagctga

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