KEGG   Lynx rufus (bobcat): 124511062
Entry
124511062         CDS       T08475                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124511062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124511062
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     124511062
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 124511062
NCBI-ProteinID: XP_046933887
LinkDB
Position
Unknown
AA seq 656 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFIRFHSPPDKEEVEASPQKVTKLGQFRVKEEDEGA
NSLRPGALFFSRINKTSPATATDPAGPSYAAATLQASSAASSASPVSRAVGGASKVRLSD
PGGVEKEGRSHRPRLIPTPQPQEAPKGKRKLDLNQEEKKMPGKASAQPSPPALKRPKLPA
PTRTPASSTPVPASARGTVPGKTREATEPRGPRAGPQELGKILQGVVVVLSGFQNPFRSE
LRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLP
SRRYLMAGPSSSSEDEGGSHSGSSGDEAPKLPQKRPQTKTKPPQAAGPSSPQRPTTPEET
KPASPGPREDTDTEGEQSEELGNGAEDSGDTEDELRRVAEQREQKQPPDQGENGEDPYAG
STDENTDNEGPPESPDLPVPELPDFFQGKHFFLYGEFPGDERRKLSRYVTAFNGELEDYM
SDRVQFVITAQEWDPSFEEALMDNPSLVFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgccggagatccgtctccgccatgtggtgtcctgcagtagccaggactcgacccactgt
gcagaaaaccttctcaaggcggacacttaccgaaaatggcgggcagccaaggcaggcgag
aagaccatctctgtggtgctccagctggagaaggaggaacagatacacagcgtggacatt
ggcaacgacggctcggccttcgtggaggtgctggtgggcagctcggccggaggggctggg
gagcaagactacgaggtcctgctggtcacttcgtctttcatgtccccttctgagagccgc
agtggctcaaaccccaaccgcgttcgcatttttgggcccgacaagttggtccgggcagca
gctgagaagcgctgggaccgcgtcaaaatcgtttgcagccagccctacagcaaggactcc
ccctatggcctgagttttatacggtttcacagccccccagacaaagaggaggtggaggcc
tcaccccagaaggtgaccaagcttggccagttccgcgtgaaggaggaggatgagggtgct
aactccctgagacccggggccctcttcttcagccggatcaataagacatcccccgccaca
gccaccgacccagcaggacccagctacgcagctgctacgctgcaggcctctagtgccgcc
tcttcggcctctccagtctccagggcagtgggcggcgcctccaaggtgagattatcagac
cctggtggggtggagaaggaggggagaagccacaggcctcgtctcatcccaacccctcag
cctcaggaggcccccaaagggaagagaaaattggatttgaaccaagaagaaaagaagatg
cccggcaaagcatcagcccagccctcaccacctgccctcaagagacccaaattgccagct
cccacccgtaccccagccagcagcaccccagtccctgcttcagcacgaggcacagtgcca
gggaagacccgagaagccacggagcccagggggccccgagctggcccgcaggagctgggg
aagatccttcaaggtgtggtggtggtgctgagtggcttccagaaccccttccgctcagag
ctccgggacaaggccctggagctgggggccaagtatcggccagactggactccagacagc
acccacctcatctgtgcctttgccaacacccccaagtacagccaggtcctaggccttgga
ggccgcatcgtgcggaaagagtgggtgctggactgtcaccgaatgcggcggcggctgccc
tcccggaggtacctcatggcagggccaagctccagcagtgaggatgaagggggctctcac
agcggcagcagtggggatgaagcccccaagctcccccaaaagcgccctcagaccaaaacc
aagccccctcaggcagcaggacccagctcaccccagagacccacaaccccagaagagacc
aaaccagcctcaccagggcctcgggaagatactgacactgagggggaacagtcagaagaa
ctgggcaatggggcagaagattctggggatactgaggatgagctgagaagggtggccgag
cagagggagcaaaagcagccccctgaccagggggagaatggcgaggacccgtatgcagga
tccacagatgagaacacagacaatgagggtcccccagagtctcccgacctgccagttccg
gagctcccagacttcttccagggcaaacacttcttcctgtacggggagttccctggggac
gagcggcggaagctcagccgatatgtcacagccttcaatggggaacttgaggactatatg
agcgaccgggtccagtttgtgatcacggcacaggagtgggaccccagttttgaggaggcc
ctgatggacaacccctccttggtgtttgtccgcccccgatggatctacagttgcaacgag
aagcagaagttacttccccaccagctttatggggtggtgccccaggcctaa

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