KEGG   Lynx rufus (bobcat): 124511302
Entry
124511302         CDS       T08475                                 
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03410  Base excision repair
lruf04140  Autophagy - animal
lruf04217  Necroptosis
lruf04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124511302
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124511302
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    124511302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lruf03036]
    124511302
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124511302
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lruf04147]
    124511302
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    124511302
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     124511302
   MMR (mismatch excision repair)
    Other MMR factors
     124511302
Exosome [BR:lruf04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   124511302
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 124511302
NCBI-ProteinID: XP_046934327
LinkDB
Position
Unknown
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatcccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacaccgctgcagatgac
aagcagccttatgagaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgacgcggcaaaaaagggagtcgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaggacgaggaagatgaagaggatgaggaagaggag
gaagatgaagaggatgaagaagaagaagaagatgatgatgatgaataa

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