Lynx rufus (bobcat): 124511536
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Entry
124511536 CDS
T08475
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C-like
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lruf03021
]
124511536
Transcription machinery [BR:
lruf03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
124511536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
124511536
NCBI-ProteinID:
XP_046934801
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MDFPGSLPPTLFRTGPLGVSNTPDLSFMCSWRDALTLPEPLAQNSQNGVSCTAAAPLWEP
ETPGPLPLLPPGPDPWDPGVTARDLLFRGGVPFRRKPRAVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGARSHSKKKTVVSVKSLLQDLGGHQPWGCPWASLSFRQRRFSILGGP
VLGTSVAGLLGELLHEELATRWERLLLDDAFTGGALAWVPGRTPQVGQLVYPAGGALDKL
HFQEVSVAPGGDPQALGDPGHIQLRGPVRQVVTHTVQGEALLAVRSDYHCALWKVSKQGR
PAPLRVLQIGKGATGISLSPHLPGELAVCSRSGAVCLWTPQDGLQQIYKDPETLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKIIDTQGPPGCGLLLFRGGAEAACQKGERVLLTRYLGG
CGPEPLCPTFHLILTQFSLYLVDERLPLVPLLKWNHDLPSAPLFAQLLPPPQPGHAQPLL
LGGQGGHLRLLQLAGTGASVPRLAGPPQSLPSSSDSLSAFPLLEPKSQWRLQERLKAPTI
GLAAALLPSASAPVLFPFQLSAAGDVFHQRLRLQADPGLASSAPVASWTPQATACCGRWL
KALLEVPLPPPVWAAPNFSHRRVLGCVEPRQMEQKVPDGLRAAMAEGRLLLRRDLGAVPS
AEPPPAPEPGPEDELSARLEAAWEGRAAAWWESQQGGSSGPGKRPRRHKRRTQLSSTFSS
LSGRLDLSDATSPPRSPDRTSPEARPQPPVTPPSQELTQEPWARGVPSERQQTLRDYMAK
LPLRGDPPGGVPSPLSQASGVRATPSGQQPLQDGSAERPLRRHTLGGAAVPSSQTSSVRA
TPSRQQAPVPSGSQPRRRKPRMGF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccggctcgctcccacccacgttgtttaggaccggcccccttggcgtgagt
aacacccctgacctgtctttcatgtgtagctggagagacgcgctcaccctgcctgagccc
ctggcccagaactcccagaatggggtgtcgtgcacggccgcagccccgctctgggagcca
gagacccccgggccccttcccttgctgcctcctggtcccgatccctgggaccctggggtg
accgcccgggacctgcttttccggggaggtgtcccattccgaagaaagccccgggccgtg
ctggatgtgacggaacagctcagccgcttcctgtgggaccacggggacatagcctttgcg
cccctggggaagctgatgctggagaatttcaaactagagggagcacggagccattctaag
aagaagacagtggtcagtgtgaagagtctgctccaggacctcggtggacaccagccctgg
ggatgtccctgggcttccctcagcttccgacagcgccggttctccatcctcgggggcccc
gtcctgggcacgtctgtggccggcctgctgggagagctgctgcatgaggagctggccacg
cggtgggagcggctcctcctggacgacgcgtttaccgggggcgcgttggcctgggtgccc
ggaaggacgccccaggtgggacagttggtctaccctgcgggaggcgccctggacaagcta
catttccaagaggtcagcgtggccccaggtggtgacccccaggccctcggcgaccctggc
cacatccagctccgagggcctgtccggcaggtggtgacccacaccgtgcaaggggaagcc
ctgctggctgtccggtctgactaccactgtgccctgtggaaggtcagtaagcaggggcgc
cccgcccccctccgggtgctgcagatcgggaagggggccacagggatcagcctcagccct
cacctgcctggggagctggctgtctgcagccgttcgggagccgtctgtctgtggaccccc
caggatgggctgcagcaaatctacaaggaccccgagacccttgtgttccgggacccctct
ccctggcgctgggcagacttcacggcccatccccgggtgctgaccgtgggtgaccgcact
ggagtgaaaattatcgacactcagggcccacccgggtgtggtctgctgctctttcgtggg
ggggcagaagcagcgtgccagaaaggggagcgcgtcctgctgacccggtacctggggggg
tgcggccctgagcccctgtgccccacgttccatctcatcctgacccagttctcgctctac
ctggtggatgagcgcctccccttggtgcccctgctgaagtggaatcacgacctcccctcc
gcccccctgtttgcccagctgctgcccccgccccagcccgggcacgcacagccgctgctg
ctggggggccagggcgggcacctgcggctgctgcagctcgcaggaacgggggcctccgtg
ccccggctggcgggccccccccagtctctcccctccagcagcgactccctctccgcgttc
cccctgctggagcccaagagtcagtggcggctgcaggagcgtctgaaagcgccaaccata
ggtctggctgccgcgctcctgccctctgcctccgcgccggtcctgttccccttccagctt
tccgcggctggggatgtcttccaccagcgcctccgcctccaggcggaccccgggctcgcc
tccagtgcccccgtggcttcctggactccccaggccaccgcctgctgcggccggtggctg
aaggccctgctggaggtacccctgcctccccccgtgtgggcagcacccaacttctcccac
cgccgtgtgctaggctgcgtggaaccgcggcagatggaacagaaagtgccagatggtctc
cgtgcggccatggccgaagggcgactcctgctgcggagggacctgggcgccgtcccctct
gcggagccaccccctgcccccgagccaggccccgaggacgagctcagtgcgcgtttggag
gcagcctgggaaggccgggcggccgcctggtgggagagccagcagggcgggagctcgggg
cccgggaaacggccccggcggcacaagcgccggactcagctgtccagcactttctcctcg
ctcagcggccgcctggacctctcggacgccaccagcccgccccgcagcccagaccggacg
tcccctgaggccaggcctcaaccaccggtgaccccgccctcccaggagctgacccaggag
ccgtgggctcggggtgtcccctcggagaggcagcagacgctccgggactacatggccaag
ctaccgctccgcggggaccccccaggaggcgtcccgtcacccctgtcccaggcctccggc
gtccgggccaccccctccgggcagcagcccctccaggatggctcagcggagcggccgctc
cgaaggcacacgctgggaggtgccgccgtgccctcttcccagacctccagcgtccgggcc
accccctccaggcagcaggcgcctgtcccctcgggctctcagccgaggaggaggaagccc
cgcatgggcttctga
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