Lynx rufus (bobcat): 124511803
Help
Entry
124511803 CDS
T08475
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04517
IgSF CAM signaling
lruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124511803
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124511803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lruf04812
]
124511803
Cytoskeleton proteins [BR:
lruf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124511803
Intermediate filaments
Intermediate filament-binding proteins
124511803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Rv3651-like_N
PH_11
Motif
Other DBs
NCBI-GeneID:
124511803
NCBI-ProteinID:
XP_046935133
LinkDB
All DBs
Position
Unknown
AA seq
2568 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNPAARWESPDRGWEREQPGAATAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANY
NLQRAFRTAEQHLGLTRLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
IFQEMVYMVDWMEEMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGGGAAGAAGAGGAAGGAHDLSSTARLLAQHKILQGELGGRRALLQ
QALRRGEELAAAGGAVGAGAETVHLAGLAERAASARRRWQRLEEAAARRERRLQEARALH
QFGADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQL
ATLGGASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELW
IGEKEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSD
EVRSCQDHLNSRWNRIVELVEQRKEEVSAVLLVENHVLEVAEVRAQVREKRRAVESAPRA
GGALQWRLSGLEAALQALEPRQAALQEEAALLAVRFPAQAARLHQGAEELGAEWGALASA
AQACGEAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGVEGPLPGSLEEADALLARHAALK
EEVDQREEDYARIVAASEALLAADGAELGPGLALDEWLPHLELGWHKLLGLWEARREALV
QAHVYQLFLRDLRQARAVLRNQEVALSGLELPGTVESVEEALKRHRDFLTTMELNQQKMQ
VAVQAAEGLLRQGNAYGEQAQEAVTRLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCHE
LDGWIHEKMLMARDGTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPE
LAASVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFVELDKKLLHMESQLQDV
DPGGDLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGER
LVRLLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGSGLQAVQQCIKK
NQGLRREIQAHGPRLEEVLERAGTLASLRSPEAEAVRRGQEQLQGAWAGLREAAERRQQV
LDAAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEES
IAQLSRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQLSRQV
DELEHWIAEKEVVAGSPELGQDFEHVTVLQEKFSEFASETGTAGRERLAAVNQMVDELIE
CGHTAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRR
LPRLTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASR
EQEVLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSS
VEVLMNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSEK
WDRHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKA
AAAWEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERG
LEPLARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEIPGRVETPAPPAAPEDAAE
TPGALAAAEQVRPRPERQESADRAEELPRRRRPERQESADQPEEAARRRRPERQESADHE
AAHSLTLGRYEQMERRRERRERRLERQESSEQEMPTRGELAKGKATLADIVEQLQEKEAG
PGLPVGPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSR
RSRSAPAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGF
YKDAKGPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMN
GWLEAVAASVGEHAEIARWGQTLPTTSSTDEGNPKREAGERRASGRRK
NT seq
7707 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggtaccaggggaagtggacaacatggagggcctgccggcccctaacaacaac
aatcctgcagcccgctgggagagtccggatcggggctgggaacgggagcagccgggagcc
gccacggcagccgcctccctctttgagtgctccaggatcaaggccttggcagatgagcgc
gaggccgtgcagaagaagaccttcaccaagtgggtgaactcgcatctcgcccgcgtcggc
tgccacatcggggacctgtatgccgacctccgggacggctttgtgctcacgcggctcctg
gaagtgctgtccggggagcagctgccaagacccacgcgaggtcgcatgaggatccactcg
ctggaaaacgtggacaaggcgctgcagttcctgaaggagcagcgcgtgcacctggaaaac
gtgggctcgcatgacattgtggacgggaaccaccggctgaccctggggctagtctggacc
atcatcctgcgcttccagattcaagtaatcaaaattgagactgaggacaacagagagaca
cgctccgccaaggatgcgctgctcctgtggtgtcagatgaagacagctggttaccctgag
gtaaacatccagaatttcaccaccagctggcgggatggcttggccttcaacgcgctcatt
caccggcacaggcccgatctcgtggacttcagcaaactcaccaagtccaatgccaactac
aacctgcagagagccttccgcacggcagagcagcacctggggctgacacgtctgctggac
cctgaggatgtgaacatggaggctccagatgagaagtccatcatcacctacgtggtctct
ttctaccactatttctccaagatgaaggctctggccgtggaggggaagcggatcgggaag
gtcctggaccaggtgttggaggtggggaagatcatcgagcgctatgaggagctggcggcc
gagctcctggcctggatccatcgcaccgtgggcctcatcagcaatcagaagtttgccaac
tctttgagtggggtgcaacagcagcttcaggctttcacggcctattgcacactggagaag
ccagtcaagtttcaggagaaggggaacctggaggtgctgctcttcagcatccagagcaaa
ctgcgtgcctgtaatcgtcgcctctttgtgcctcgggagggctgtggcatctgggatatc
gacaaggcatggggccagctggagaaggcagagcacgaacgggaggccgccctgcgagct
gagctgatccggcaggagaagctggaacttttggcccagaggttcgaccacaaggtggcc
atgagggagagctggctgaatgagaaccagcgcctggtctcccaggacaacttcgggtac
gagctgccggcggtggaggcagccatgaagaaacacgaggccatcgaggcggacattgca
gcctatgaagagcgggtgcagggcgtggccgagctggcccaggccctggcggcagaaggt
tactacgacgcccggcgcgtggcggcccagcgtgacagcgtcctgcgccagtgggccctg
ctgaccgggctggtaggtgcccggcggacgcggctcgagcagaacctggccctgcagaag
atcttccaggagatggtgtacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggaatgtgggcagcacctggtggaggcggaggacctgttgcagaagcatggactg
ctggagggggacatcgcggcccagagtgagcgagtggaggcgctcaacgctgctgccctg
cgtttctctcagctgcagggctaccagccctgcgatccgcaggtcatctgcaaccgcgtg
aaccacgtgcacggctgtctggcggagctgcaggagcaggcggcgcggcggcgcgcggag
ctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggcggagagctgg
gcccgagacaaggagcgcctcctagaggcggcgggcggcggcggcggcggcggcgcggcg
ggcgcggcgggcgcggggggcgcggctggcggcgcgcacgacctgtccagcactgcgcgc
ctcctggctcagcacaagatcctgcagggcgagctgggcgggcggcgggcgctgctgcag
caggccctgcggcgcggcgaggagctggctgcggccggcggggccgtgggcgcgggcgcc
gagacggtgcacctggcgggcctggcggagcgcgcggcgagcgcgcggcggcgctggcag
cggctggaagaggcggcggcgcggcgcgagcggcggctgcaggaggcgcgggcgctgcac
cagttcggcgccgacctcgacgggctcctcgactggcttcgcgacgcgtaccgcctagca
gccgcgggcgacttcggccacgacgaggcgtccagccgccgcctggcccgccagcaccgc
gcgctcaccggggaggtggaggcgcatcgcgggcccgtgggcggcctgcggcgtcagttg
gcgacactggggggcgccagcggcgccgggccactggtggtggccctgcaggtgcgcgtg
gtggaggcggagcagttgttcgccgaggtgaccgaggtggctgcgctgcggcgccagtgg
ctgcgagacgccctggcggtctaccgcatgtttggcgaagtgcacgcgtgcgagctgtgg
atcggtgagaaggagcaatggctgctggccatgcgtgtgcccgattcgctcgacgacgtc
gaggtggtgcagcaccgatttgagagcctggaccaggagatgaacagtctgatgggccgt
gtcctggatgtgaaccacacggttcaggagctggtggaaggaggccatcccagttcagat
gaggtgcgctcctgccaggaccacctcaacagcaggtggaaccgcatcgtggagctggtg
gaacagcgcaaagaggaggtgagcgcagtgctgctggtggagaaccacgtgctggaggtg
gccgaagtgcgcgcccaggtgcgcgagaagcggagggccgtggagagcgcgccccgagcg
ggcggcgccctgcagtggcgtctcagcggcctggaggcggctctccaagctctggagccc
cgccaggcggccctccaggaggaggcggccctgctggccgtgcgcttcccggctcaggct
gcgcggctgcaccagggtgcggaagaactgggcgccgagtggggcgcgctggccagcgca
gctcaggcctgtggcgaggccgtggccgcggccgggcgcctgcagcgcttcctgcacgac
ctggacgctttcttggactggctggtgcgcgcccaggaggcggcgggcggtgtcgagggc
cccctgcccggcagcctggaagaggccgatgcgctgctggctcgccacgcggcgctcaag
gaggaggtggaccagcgcgaggaagactatgcccgcatcgtggcggccagcgaggcgctg
ctggcggccgacggcgccgagctgggcccgggcttggcactggacgagtggctgccgcac
ctggaactcggctggcacaagctgctcggcttgtgggaggcgcgcagggaggccctggtg
caggcacacgtctaccagctctttctgcgcgacctacgccaggctcgggcggtgctgcgc
aaccaggaggtggcactgtcgggtctggagctcccgggcacggtggagtcagtggaggag
gcactgaaaaggcaccgggattttctcaccacgatggagctgaaccagcaaaagatgcag
gtggcggtgcaggctgccgagggcctgttgaggcagggcaacgcctacggagagcaggcc
caggaggctgtgacccggctgctggagaagagccaagaaaaccaactacgggcacagcaa
tggatgcagaagctacacgaccaacttgggctgcagcacttcctccgagactgccatgag
ctggatggctggatccatgagaagatgctaatggcgcgcgatggcacacgggaagacggc
cacaagctgcataagagatggctccggcaccaggcgttcatggccgagttggctcagaat
aaggagtggctggagaagatcgagagggagggccaacaactgatgcaggagaagccagag
ctggcggcctcagtgcggaagaagctgggtgagatccggcagtgctgggctgagctggag
agcaccacccaggccaaggcaagacagctctttgaggccagcaaggccgaccagttggtg
cagagcttcgtggagctggacaagaagctcctccacatggaaagccagctgcaagacgtg
gatcctggtggggacctagccaccgtcaacagccagctcaagaagctacagtcgatggag
tcgcaggtggaggagtggtaccgcgaggtgggagagttgcaggcgcagaccgcggcgctg
cccctggagccggccagcaaggagctggtgggcgagcggcagaacgcggtgggcgagcgc
ttggtgcgcctgctcgagcccttgcaggagcgccgccgcctgctgctcgcctccaaggag
ctgcaccaggtggcgcacgacctcgacgacgagctggcatgggtccaggagcgactgcca
ctggccatgcagaccgagcgaggcagtggtttgcaggctgtccaacagtgcatcaaaaag
aaccagggcctgcgacgggagatccaggcgcacgggccgcggctggaggaggtgctggag
cgcgcgggcacgctggcctcgctgcgtagcccggaggcggaggccgtgcgccgaggtcag
gagcagctgcagggcgcctgggccggcctgcgggaggcggcggagcggcggcagcaggtg
ctggacgccgccttccaggtggagcagtactacttcgacgtggcggaggtggaggcgtgg
ctgggcgagcaggagctgctcatgatgagtgaggacaagggcaaggacgaacagagcacc
ctgcagctgctcaagaagcacctgcagctggagcagggcgtggagaactacgaggaaagc
atcgcgcagctgtcgcgccagtgccgggcgctattggagatggggcacccggacagcgag
cagatcagccgtcggcagtctcaggtggaccgcctgtatgtggcactcaaggagctgggc
gaagagcgcagggtgagcctggagcagcagtactggctgtaccagctcagccgccaggtg
gacgagctcgagcactggatcgcggagaaggaggtggtggccggttcccctgagcttggc
caggactttgagcacgtcacggtgctgcaggagaaattctccgagttcgccagtgagacg
ggcacggcagggcgggagcggctggcggccgtgaaccagatggtggatgagctgattgag
tgcggccacacggcggcggccaccatggctgagtggaaggacgggctgaacgaggcctgg
gccgagctgctggagcttatgggcacaagggctcagctgctggccgcctctcgggagctg
cataagttcttcagcgatgcccgagagcttcagggtcagatcgaggagaagcggaggcga
ctgccccgtctgaccgccccacctgagccgagacccagcgccagctccatgcagcggacc
ctgcgggcctttgagcatgacctgcagctcctcgtgtcccaggtacggcagctgcaggag
ggggcagcccagctgcggacggtgtacgcgggtgagcacgcagaggccatcgccagccgg
gagcaggaggtgctgcagggctggaaggagctgctggcagcctgtgaagacgcccgcctg
cacgtcagctccacggccgacgcgctgcgattccacagccaggcccgtgacctgctctcc
tggatggacggcatcgccggccagattggggcagctgacaagcccagggacgtgtcgtca
gtggaggtgctcatgaactaccaccagggcctgaagactgagctggaggcacgggtgcct
gagctgacagcctgccaggagctggggcgctctctgctgctcaacaagagtgccatggct
gacgagatccaggcacagctggacaagctgggaaccaggaaggaggaggtgtcagagaag
tgggaccgccattgggaatggctgcagcagatgctggaagtgcaccaatttgcccaggag
gcagtggtggccgatgcctggctgacagcccaagagccgctcctgcagagccgggagctg
ggcagcagcgtggatgaggtggaacagcttatccggcgacacgaggctttccgcaaagcg
gctgcagcctgggaagaaaggttcagctctctgcggcgcctgaccacgatagagaaactc
aaggcggaacagagcaagcagcccccgacgcccctgctggggcgcaagttctttggagac
cccacggaactggcggccaaggcagcgcccctactgcggccagggggctacgagaggggc
ttggagcccctggctcgtcgggcctcggacacactgtccgcagaggtgcggacccgggtg
gggtacgtgcgccaggagctcaagcccgagcgcctccagccgcgcatcgaccggctgccg
gagatcccggggagggtggagactccagccccgccggccgcacccgaggatgcggcggag
acccccggggccctcgcggcggcggagcaggtccggccgcgcccagagcgccaggagtca
gctgatcgcgccgaggagctgcccaggaggcggcgaccggagcgtcaggaatcggccgat
caacccgaggaggctgcgcggaggcgacggccagagcggcaggagtccgcggaccacgag
gcggcacacagcctcaccctgggccgctatgagcagatggagcggcggcgcgagcggcgc
gagcggcggttggagagacaggagtccagcgaacaggagatgcctaccagaggagagctg
gccaaggggaaggccaccctggctgacattgtggagcagctgcaggagaaagaagcaggc
ccagggctccctgttgggccgtcgctgcctcagcctcgtgagcttcccccaggccgcctg
cccaacgggcttgagccgcccgagcggacacctcggccggaccggccgcgggcacgggac
cggcccaagccgcgacggcggccgcggcccagagagggtggtgagggcgggggaagccgg
cgctcgcgctccgccccggcccagggcggctccgcccccgcgcctccgccaccgcccact
cacacagtgcagcacgagggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaag
tcgtccaaccggtcttgggtgagcctgtactgcgttctcagcaagggggagctgggcttc
tacaaggacgccaagggtccggcgtctgggggcacacacggcggggagccactgctcagc
ctgcacaaggccaccagcgaggtggctagtgactacaagaaaaagaagcacgtcttcaag
ctccagacccaggatggcagcgagtttttgctccaggctaaagatgaggaggagatgaac
ggctggctggaggctgtggccgcttcagtgggagaacacgccgagatcgcccgctggggg
cagacactacctaccacgtcctccacggatgagggcaaccccaagcgggaggcaggggag
cgcagggccagcgggcgccggaagtga
DBGET
integrated database retrieval system
