Lynx rufus (bobcat): 124511882
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Entry
124511882 CDS
T08475
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124511882
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
124511882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124511882
NCBI-ProteinID:
XP_046935231
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MATLPAEPSAGPAAGGEAVAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGEAAAGA
EGPGSPGVPGSPPEAAAEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLR
GSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG
AVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLS
LTQVSNWFKNRRQRDRTGGGGAPCKSESDGNPTTEDESSRSPEDLDRGVAPVASEAPAQG
SIFLAGAAPPAPCPASSSILVNGSFLAAGSSPAVLLNGSPVIINSLALGEASSLGPLLLT
GGSGAPPPPPPPPQPSPQGASEGKTSLVLDPQTGEVRLEEAQPEAPETKEAQGAASVPAG
EEAPGPLPQVVPGPPPAATFPLPPGPVPSVAAPQVVPLSPPPGYPAGLGPTSPLLNLPQV
VPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPTNVHLINSGVGVTALQLPSAAAPGN
FLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKPDAAISVPEG
ALPVAPSPALPEVHALGPLSAHQPPQPPPAPAATTAASLPFPADSSGLLPGFPAPPPEGL
MLSPAAMPVWPAGLELSAGAEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGSTAGGEVD
EGLEAETKVLTQLQSVPVEDPLEL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcggggccggcggctgggggggaggcggtggcg
gcggcggcgaccgaagaagaggaggaggaagcgcgccagctcctgcagactttgcaggcg
gccgagggtgaggcggcggccgcagccggggccggggcgggcgaagcggcggcgggagcg
gagggcccgggatccccgggcgtccccgggtcgccccccgaggccgctgccgagccgccc
acgggcctccgcttctcgcccgagcaggtggcgtgcgtttgcgaggcgctgctacaggcg
ggccacgccggccgcttgagccgcttcctgggcgcactgcccccggccgagcgcctacgt
ggcagcgatccggtgctgcgcgctcgggccctggtggccttccagcgaggcgagtacgcc
gagctctaccggctgctcgagagccgccccttccccgccgcccaccacgcctttctgcag
gacctctacctgcgcgcgcgctaccacgaggccgagcgagcccgcggccgcgcgctgggc
gcagtggacaagtaccgtctgcgcaagaagttcccgctgcccaagaccatatgggacggc
gaggagaccgtctactgcttcaaggagcgctcccgcgccgcgcttaaggcctgctatcgc
ggcaaccgctaccctacgccggacgagaagcgccgcctggccacgctcaccggcctctcg
ctcacgcaggtcagcaactggttcaagaaccggcgacagcgcgatcggaccgggggcggc
ggcgcgccctgcaagagcgagtctgacgggaaccccacgactgaggacgagtccagccgc
agtcccgaggacctggacaggggcgtggctccagtggcatccgaggcccctgcccagggc
tccatatttctggcgggggccgcccctccagcaccgtgccctgcctcctcttccatcctg
gtgaatgggagcttcctggctgcaggcagctccccagccgtgctcctcaatgggagcccc
gtcatcatcaacagcctggccctgggggaggcctccagcctgggccccctgctgctcacg
gggggcagtggcgctcctccaccaccaccaccgcccccgcagcccagtccccagggggcc
agtgagggcaagacctccctggtcctggaccctcagaccggggaggttcgactagaggag
gctcagcccgaggccccggagaccaaggaggcccagggggctgcttcggtgccggccgga
gaagaggctccggggcctctgccccaagtggtgcccggccccccgccggccgccaccttt
cctctgcccccgggaccggtgccttctgtagctgctccccaagtggtgccgctttcccca
ccccctgggtaccccgcaggcctgggccccacctccccgctgttgaacttgccccaggtg
gtacccacctcacaggtggtgacgctgccccaggctgtggggccactgcaactgttagcc
gcggggccgggcagtcctgtgaaggtggcggctgccgcgggccctaccaacgtgcacctg
ataaactccggcgtgggcgtgaccgccctgcagctgccctcggctgcggccccaggaaac
tttctcctggccaaccccgtgtctggcagccccatcgtgacaggcgtggccgtgcaacag
ggcaagatcatcctcaccgccaccttccccacaagcatgctggtctcccaggtcctgcca
cctgcccccagcctggccctgcccctgaagccagacgcagccatctcggtgcccgaggga
gccctcccagtggcgcccagccctgccctcccggaggtccacgccctcggcccgctctct
gcacatcagccgccacagccgccacccgcccctgccgccaccactgccgccagcctgccc
ttccctgcggactcctccggcctcctgccgggcttcccggcgcccccgccggaagggctc
atgctgtcgcctgcagctatgcccgtctggccggcaggcctggaactgagcgcaggcgca
gaagggctgctagaagcagagaaggggctggggacgcaggccccccacaccgtgctgagg
ctgccggaccctgaccctgaaggactgctcctggggtccacggcggggggcgaagtcgat
gaggggctggaagccgagaccaaggttctgacccagctacagtcggtgcctgtggaagac
cccctggaactgtga
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