Lynx rufus (bobcat): 124511937
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Entry
124511937 CDS
T08475
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124511937
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
124511937
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124511937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124511937
NCBI-ProteinID:
XP_046935295
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGCSPFLDHEVDYQKLNSAMNDFYNSMCQDIETKPLMLEEG
QVCVVYCQELKCWCRAVIKSLVSLADHHLAECFLVDFAKYIPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIDFCEDSAEIVPAKKWDSAAIQYFQNILKATTQVEAKLCAVEED
TFEVYLYVTIKNEKVCVNDDLVAKNFARYISPKENKNLHSVEKPRVNRKSASFSSKLNPA
LTLWPMFLQGKDSQGMENSHGLTFLAQSLQHPWPKGVVGDLGPTAVILDKSVKCNMDSLR
GSPKKKSEMKQQRISLKDINKCAESSAYWPTKRGITIYAEPDTPAASTLCQKPSKKPLRL
AEKKEHNEKNGCVKLLQFLNPDPLRTDGISDLQKLQKLRSGSQQPFAVLRNKIEPCLSVD
TSPLSADLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCGNDPLLYLPPLLTILQT
GGCYKSLPSRNGPLAVIVCPGWKKAQLIFELLGDYGMSPTPLHRVLLTIGLHKDEAKNMK
LPRACDIIVTTPHSLLRLLQYQSLLFLRLCHLILDEVEVLFFEANKEMFAILDNFKKNID
VEERESAPHQIVAVGVHWSRHIEQLMKEFMNDPYVVVTAMEEAALYGSVQQVVHLCLECE
KTSTLLQTLDFIPSQAQKTLIFTGSVAETETVCKVVESSSIFCLKMHKETVFNLKSVLEQ
WKKKLSSGSHVVLALTDDCIPLLTITDATCVIHFSFPSSPKIFGGRLYCMSDHFQSPTEQ
GSPAEQGDKKTKSVLLLTERNACHAVGVLRYLERADAKIPVELYEFTAGVLEAKEDKKAR
RPLCPYLKSFGFCKDKRICPDRHHINPEIDMPRKLSNQTLPTFGYIKIIPFYILNATHYF
GRIVDKHVDLYATLNAEMNEYFKGNSNNTAVEKVEKFGLYGLAEKTLFHRVEVLEMSQKA
DSWGLDSVLVKFIDEGRTGLVTRHQLLPLPENFHALPPQAVEFIVCRVKPADNEVEWNPK
ITRYIHHKIIGKLHDAKVILALGNTVWVDPMVHVTKLSNLKTSVIDYNVRAEILSMGMGI
DNSEHMECLKTLQEGVKTPPGEESLSQAPAPSSAEDAACLQSARQEDRGSGGGADSKTKP
ESQKHETLPENTRDSSLNKTTEPLQSFHPQIRWFQKDDVVILKIRIRNVKDYNCKYFRDR
VVFSAWTGEKFYVADMELQANIVRDGCKCTITDEEPVITLAKERKEPWGSLLKQRNPNVA
FDFDHWEEREEEESPFPKVVNCKNLPLKVAEVAESSDGTSEDDGSESE
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgctggtgctgaagattgaagatccgggatgcttctgggttattataaaa
ggatgtagtccctttttagatcatgaagttgattatcaaaaactaaatagtgccatgaat
gacttctataatagcatgtgtcaagatatagaaacaaagccgttaatgttggaagagggg
caggtgtgtgtggtttactgccaggaactgaagtgctggtgcagggctgtcattaagtcg
ctggtgtctttggcggaccatcacctggcggagtgcttcctggtggactttgccaagtac
atcccagtgaaatctaaaaacatccgagttgcagtagaaacttttatgcagcttccctac
cgagcgaaaaaattcagactgtactgcacgaaacctgttacgttacacattgacttctgc
gaagatagtgctgaaattgtacctgccaagaagtgggacagtgcggctattcagtacttt
cagaacatcctgaaagcaactacccaggtggaggccaaattgtgcgccgtggaagaagat
acttttgaggtctacctttacgtaaccataaaaaatgagaaagtctgtgttaatgatgat
ctggttgcgaagaactttgctcgttacatatcacccaaggagaataaaaaccttcattct
gtagagaaaccacgagtgaatagaaagtctgcatccttttccagtaaactcaatccagcg
cttactctttggccaatgtttttgcaaggaaaagattctcagggaatggaaaattcacat
ggtttaacttttctggctcagtctcttcagcatccatggcccaagggtgttgttggtgac
cttgggccaactgctgtgatcctggataaaagtgtaaaatgtaatatggattcattgaga
ggttcacctaaaaaaaaatctgaaatgaaacaacagcgcatctctttgaaagatataaat
aagtgtgctgaatcttcagcgtactggccaacgaagaggggaataaccatatacgctgag
ccggatacaccggcagcaagcactttatgtcagaagccaagtaagaagccactcaggttg
gccgagaagaaagaacacaatgagaagaatggctgtgtgaaattactgcagtttttaaat
cctgatcctttgagaactgatggaatctctgatcttcagaagctgcagaagcttcggtcg
gggtcccagcagccgtttgctgtgctccggaacaagatcgagccttgcttgtcggttgac
acgtcgccactttcggctgacctgaaaaaggctctccaaagaaacaagtttccgggacct
agccacactgaatcctactcttggcctcccatagcgaggggctgtgacgtggtggtcatt
tctcactgcggaaatgaccctctgctgtaccttccgccactccttacgattctgcaaacg
gggggctgctacaagtctttgccgagcagaaacggacctctggcagtcatcgtgtgccct
gggtggaaaaaggcccagttgatttttgaattactgggggactatggcatgtcccccacg
cctcttcaccgagtgctgttaacaatcggactccacaaagatgaagccaaaaacatgaag
cttccaagggcttgtgatataattgtgacgacaccgcacagcctcctgagacttctccag
tatcagagcttgttatttctcagactctgtcacctcattttggatgaggtggaagtatta
ttctttgaagctaacaaagaaatgttcgctatattagataactttaaaaaaaacattgac
gttgaagaaagggaatctgcaccacatcagattgttgccgttggagttcattggagcaga
catatagaacagttgatgaaagagttcatgaatgacccctacgttgtggtcacggccatg
gaggaggctgctctctatggcagcgtccagcaggtagtgcacctttgcctggaatgtgaa
aaaacctctactttactccagactctagatttcattccaagtcaagcacaaaagaccttg
atcttcaccggttctgtagctgaaacagaaaccgtgtgtaaggtagtagaaagcagttca
atattttgcttgaaaatgcataaagaaacggtttttaatttaaaaagtgttttagaacag
tggaagaagaagttaagttctggctctcacgttgtattagccttaactgacgactgcata
ccgctcttgaccatcaccgatgccacatgcgtgattcacttcagcttcccttcctcacca
aagatttttggtgggcgtctgtattgcatgtctgaccattttcagagtccaaccgagcag
ggttctcctgcagaacagggagataagaaaaccaaatctgtcttgctgctgacggagaga
aatgcgtgccacgcggtcggggtcctgcgctacctggagcgagccgatgccaagattcct
gtggagctgtatgagtttactgcgggggttctggaagccaaagaagataagaaagcccga
aggcctctttgtccgtatcttaagtcttttggtttttgcaaagacaaaaggatctgtcct
gatcgacaccatattaatccagaaatagacatgccaaggaaattatccaaccaaactcta
ccaacatttggatacatcaaaataatacccttttatattttgaatgcaacgcattacttt
gggcgtatagttgataagcacgtggatctttatgcaacccttaatgctgaaatgaacgag
tattttaagggtaacagcaataacacagctgttgaaaaggtggaaaaatttggattatat
ggattagcagaaaaaacactttttcacagggttgaggtgttggagatgagccaaaaagca
gacagctggggcctggacagcgtcctcgtcaagtttatagacgaaggccggactggactc
gtcacgagacaccaattgctgcctctcccagaaaatttccacgctctgcccccgcaggcg
gtggagttcattgtttgcagagtgaaacccgctgacaacgaagttgaatggaacccaaag
atcactaggtacattcatcataaaatcattgggaaattgcatgatgcgaaagtgatactg
gctttaggaaacacagtgtgggtcgacccaatggtgcacgttacaaaactgtcaaatctg
aaaacttctgtcattgattataacgttcgtgctgaaattctgtcaatgggaatgggcatt
gacaactcagagcatatggaatgcctgaagacgttacaggaaggagttaaaacaccaccc
ggtgaagaaagcttaagccaagccccggcgccttcttcagcagaagatgctgcttgtctg
cagagcgcgcggcaagaggacaggggctcgggaggaggtgctgactccaagacaaagcca
gaaagccaaaagcatgaaactctacctgaaaacacgagagactcttctcttaataaaacc
acagaacctctgcaaagcttccacccacaaatcagatggttccaaaaagacgacgtggtc
atactgaagataagaataaggaatgtaaaggattacaactgtaaatatttcagagataga
gtcgtgttcagtgcctggacgggagagaaattttacgtggccgatatggagctgcaggcc
aacatagtaagagacggctgcaaatgcacgattacagacgaggaacctgtcatcactctc
gcgaaggagagaaaggagccttggggcagcttactcaaacagaggaatcctaatgtggct
ttcgatttcgatcactgggaagaacgtgaagaagaggagagccccttccctaaggttgtg
aattgtaaaaacctgcccttgaaggtggcagaggtggctgagagcagtgacgggacatcg
gaggatgacggaagcgagagtgaatga
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integrated database retrieval system
