Lynx rufus (bobcat): 124511984
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Entry
124511984 CDS
T08475
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124511984
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124511984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
124511984
NCBI-ProteinID:
XP_046935311
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MSPVRRGGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLIH
VEVEVRDINDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRASTCKVIVRIRDVNDNAPDITITPLA
APGAPAASPFAAAAAAAAALGGADATSPTGPGTPEAGAISLVPEGAARESLVALVSTSDR
DSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRT
VRPYTVRVSDENDNAPLFSRPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLLEA
EVGRAGGSVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRV
LDQNDHAPVLVHPAPANGTLEVAVPGRTARDTAVARVQARDADDGANGELAFELQQQEPR
EAFAIGRRTGEIVLTDDLSQEPPGRVFRALLVISDGGRPPLSTTATVSFVVTAGDGRGLV
APASAGSPERSRPPGSRLAASGPALQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKK
EVRKGGARREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGSGKAPFGSPAADP
PPPAVAAAEVPGSEGGSATGESSCHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGH
SFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILG
HSDRCWSPSCGGPNTHPPPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYE
KVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKEANENV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggtgaggcgcgggggcagcccctgccttttcccattacagctcttcagcctc
tgttgggtgctttcggtggcccagagcaagacagtgcgatacagcaccttcgaggaggac
gctcctggcacggtcatcgggaccctagctgaggacctgcatatgaaagtatccggagac
acaagcttccgcctgatgaagcagttcaacagctcgctgctccgagtgcgcgagggcgac
gggcagctgaccgtcggggatgcgggcctggaccgcgagcggctgtgcggccaggcacca
cagtgcgtgctggccttcgacgtggtcagcttctcccaggagcagttccggctgatacac
gtggaggtggaggtgagggacatcaacgatcacgcgccgcgctttccccgggcccagatc
cccgtggaggtgtccgagggcgcggctgtgggcacgcgcatcccgctggaggtgccggtg
gacgaggatgtgggagccaacgggctgcagagcgtgcgcctggccgagcctcacagcccc
ttccgcgtggagctgcagacgcgcgcggacggcgcgcagtgcgcggacctggtgctgctg
caggagctggaccgcgagagccaggccgcctacagcctggagctagtggcccaggacggc
ggccgcccgccgcgctccgccactgccgccctcagcgtgcgagtgctggacgccaacgac
cacagcccggccttcccgcagggcgccgtggccgaggtggagctggcggaggacgcgccc
gtgggctccctgctgctggacctggacgcagccgaccccgacgagggccccaacggcgac
gtggtgtttgccttcggtgcccgcaccccgcccgaggcgcgccgcctcttccgcctggac
ccgcgctcgggccgcctcaccctggcaggacccgtggactacgagcgccaggacacctat
gagctagacgtgcgggcccaggaccgcggtcccgggcctcgggcctccacctgcaaagtc
atcgtgcgcatccgcgacgtcaatgacaacgctccggacatcaccatcaccccgctggcc
gccccgggcgcgcctgccgcctctcccttcgccgccgccgccgccgccgccgcggctctc
gggggtgcggacgcgacctcgccgaccggacctggaacgccggaggccggcgccatctcg
ttggtgccagagggggcggcgcgcgagagcctggtggctctggtcagcacctcggacaga
gactcgggcgccaatgggcaggtgcgctgcgccctctacgggcacgagcatttccggctg
cagccggcctacgcgggcagctacctggtggtgaccgcggcgtccctggaccgcgagcgc
atcgctgagtacaacctgacgctagtggctgaggacagaggcgcgccccctctacgcacc
gtgcggccctacacggtgcgcgtgagcgacgagaatgacaacgcgccacttttctcacga
ccagtctatgaggtgtccgtacgtgagaacaacccgcccggggcctacttggccacggta
gccgcccgggatccggacctgggccgcaacggccaggtcacctaccggctgctggaggcc
gaagtaggccgtgccgggggctcggtgtccacctatgtgtcggtagacccggctaccggg
gccatctacgcgctgcgaagcttcgactatgagaccctacgccagctcgacgtgcgcatc
caggcgagcgacggtggctcccctcagctctccagcagtgccctggtgcaagtgagagta
ctggaccagaacgaccacgcacccgtcctggtgcacccggcgccggccaacgggaccctg
gaagtggcggtccccgggcgcacggcaagggacacggcggtggcgcgtgtgcaggcccgg
gacgcagacgatggtgccaacggggagctggcattcgagctgcagcagcaggagccgcga
gaagccttcgccatcggccgccgcacgggggagatagtgctcacagatgacctctcgcag
gagccccccggccgcgtcttccgggctctgttggtcatatccgacggcggccgccccccg
ctctccaccactgccactgtcagcttcgtggtgacagcaggtgacggacgcgggctggtg
gcgcccgccagtgcagggagcccggagcgctctcgcccgcctggctcgcggctcgcggcg
tcggggccggcgctacaatgggacacgccgctaatcgtcatcatcgtgttggcgggaagc
tgcacgctgctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaag
gaggtgcgcaaagggggggcccgccgggaagagcggcccggggcggcgggcggcggagcc
tcggctcccggctccccggaggaggctgcccggggagccgggcccaggcccaacatgttc
gacgtgctcaccttccctggcagcggcaaagcgccctttggcagccccgcggccgacccg
cccccgcccgcggtcgctgcggccgaagtgccgggctcggagggcggcagcgccaccggg
gaaagctcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctac
ggtgcctctcccggcttcggaaaggagccggcgccccctgtggcggtctggaaaggacac
tctttcaataccatctccggccgagaagctgagaagttcagcggcaaagacagcggcaaa
ggggacagtgatttcaacgacagcgattctgacatcagcggggacgctctgaaaaaggat
ctcatcaaccacatgcagagtggactgtgggcgtgcaccgctgagtgtaagatcctgggc
cactctgaccgctgctggagcccgtcatgtggagggcccaacacacatcccccgcctcac
ccaccggcccagatgtctaccttctgtaagagcacgtccctgcctcgtgatcctctgcgc
agggacaattactaccaggcccagctgcccaagacagtggggctgcagagcgtctatgag
aaagtgctacacagggactatgacaggacagtcactctgctctcccctccccgcccaggg
aggctcccagacttgcaggagattggggtacccctctatcagtccccccctggcaggtac
ctgtccccaaagaaggaagccaatgaaaatgtgtaa
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