Lynx rufus (bobcat): 124512900
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Entry
124512900 CDS
T08475
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04080
Neuroactive ligand-receptor interaction
lruf04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124512900
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
124512900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124512900
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124512900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ion_trans
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
124512900
NCBI-ProteinID:
XP_046936496
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MKKWGSSDSGESEEPPQEDSCSDPLDGDPNSRPAPAKPHIFPTAKSRSRLFGKCDSEEAS
PMDCSYEEGQLASCPAITVSPVVIIQKHEDGLTCDRQSSQDSAPAGSEKNLKLYDRRKIF
EAVAQNNCEELQSLLLFLQKSQKHLMDSEFKDPETGKTCLLKAMLNLHDGQNDTIPLLLE
IARQTDSLKEFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKK
TKGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNT
ADNTKFVTSMYNEILILGAKLHPTLKLEELTNKKGLTPLALAARSGKIGVLAYILQREIQ
EPECRHLSRKFTEWAYGPVHSSLYDLSCVDTCEKNSVLEVIAYSSSDTPNRHDMLLVEPL
NRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTTAAYYRPVDGLPPYKLKHTVGDYFRVTGE
ILSVSGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSLFMLGTVVLYFCHHKEYV
ASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTL
IEDGKNNSVPAESTLHRWRGPGCRPPDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKA
VFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMR
KAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSFSL
RSGRVSGRNWKNFALVPLLRDTSTRERHPGQPEEVHLRHFAGSLKPEDAEVFKDPAALGE
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatgggggagctcagactcaggggagtctgaggagccaccccaagaggactcc
tgctcagaccccctggatggagaccctaactccaggccagctccagccaaaccccacatc
ttccccacggccaagagccgcagtcggctttttgggaaatgcgactcggaggaagcttct
cctatggactgctcttacgaggaaggccagctagcctcctgcccagccatcaccgtcagc
cctgttgtcatcatccagaagcatgaggatggcctcacctgtgacaggcagtcttcccag
gactctgctcctgctgggtctgagaagaacctcaagctgtatgatcgcaggaagatcttt
gaagccgtcgctcagaataactgtgaggagctgcagagtctgctgctcttcctgcagaag
agccagaagcacctcatggacagcgagttcaaagacccagagactgggaagacctgtctg
ctgaaagccatgctcaacctgcacgatgggcagaatgataccattcccctgctcctggag
attgcccggcagacggacagcctgaaggagtttgtcaacgccagttacacagacagctac
tacaagggccagacggccctgcacattgccattgagaggcggaacatggcactagtgacc
ctcctagtggagaacggggcagacgtccaggctgcagccaacggggacttctttaagaaa
accaaagggcggcccggcttctactttggtgagctgcccctctccttggctgcatgtacc
aaccagctgggcatcgtgaagttcctgctgcagaactcttggcagccagcagacatcagt
gcccgggactcggtgggcaacacagtgctgcatgcgctggtggaggtggccgacaacaca
gctgacaacactaagtttgtgacgagcatgtacaatgagattctgatcctgggggccaag
ctccaccctacactgaagctggaggagctcaccaacaagaaggggctgacgccactggct
ctggctgccaggagtgggaagattggggtcttggcctatattcttcagagggagatccag
gagcccgagtgcaggcacctgtccaggaagttcaccgagtgggcctacgggcctgtgcac
tcctcactctacgacctgtcctgcgtcgacacttgtgagaagaactcggtgctagaagtg
attgcctacagcagcagtgacacccccaatcgccacgacatgcttttggtggaaccgctg
aaccgactcctgcaggacaagtgggacagatttgtcaagcgcatcttctacttcaacttc
ttcgtctactgcttgtatatgatcatcttcaccacagcagcctactacaggcctgtggat
ggcttgcctccctataagctgaaacacactgttggggactatttccgagtcactggcgag
attctttctgtatcaggaggagtctacttttttttccgagggattcaatatttcctgcag
aggcggccgtctctgaagaccttgtttgtggacagctacagtgagatgcttttctttgtg
cagtcactgttcatgctggggaccgtggtgctgtacttctgccaccacaaggagtacgtg
gcctccatggtgttctccctggccatgggctggaccaacatgctctactacacccgcggc
ttccagcagatgggcatctatgctgttatgattgagaagatgatcctgagagacctgtgt
cgcttcatgtttgtctaccttgttttcttgttcgggttttccacagcggtggtgacactg
attgaggatgggaagaataattctgtgccggctgagtccacattgcacaggtggcgaggg
cctggctgccggccacccgacagctcctacaacagcctgtactccacgtgtctggagctc
ttcaagttcaccattggtatgggcgacctggagttcaccgagaactatgacttcaaggct
gtcttcatcatcttgctgctggcctacgtgattctcacctatatcctcctgctcaacatg
ctcatcgccctcatgggtgagaccgtcaacaagatcgctcaggagagcaaaaacatctgg
aagctacagagagccatcaccatcctggacacggagaagagcttccttaagtgtatgagg
aaggccttccgctcaggcaagctgttgcaagttgggtacacacctgatggcaaggatgac
tacaggtggtgtttcagggtggatgaggtcaactggaccacctggaacaccaatgtgggc
atcatcaatgaagacccgggcaactgtgagggcatcaagcgcaccctgagcttctctctg
cgctcaggcagagtttcaggaagaaactggaagaattttgccctggttcccctcttaaga
gacacaagtacaagagaaaggcaccctggccagccggaggaggttcatctgaggcacttt
gcaggttccctcaagccagaagatgctgaggtcttcaaggatcctgctgctttaggggag
aaatga
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