Lynx rufus (bobcat): 124512958
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Entry
124512958 CDS
T08475
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03030
DNA replication
lruf03420
Nucleotide excision repair
lruf03430
Mismatch repair
lruf03440
Homologous recombination
lruf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124512958
03420 Nucleotide excision repair
124512958
03430 Mismatch repair
124512958
03440 Homologous recombination
124512958
03460 Fanconi anemia pathway
124512958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124512958
03032 DNA replication proteins [BR:
lruf03032
]
124512958
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124512958
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124512958
DNA replication proteins [BR:
lruf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124512958
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124512958
MMR (mismatch excision repair)
124512958
DSBR (double strand breaks repair)
HR (homologous recombination)
124512958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
124512958
NCBI-ProteinID:
XP_046936573
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEEEQLSSNCICQINRFIVNTLKDGRRVIILMELDVLKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPASAANPPASKPQQQNGSSGMGSTASKTYGASKTFGKAGATNLANTGSGG
TQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFN
EQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDGHHLPTVQ
FDFTAIGDLENKSKDSLIDIIGICKSYEDATKITVKSNNREVSKRDIYLMDMSGKVVTAT
LWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEG
QALDGISISDLKSGGTGGSNTNWKTLYEVKSENLGHGDKADYFSCVATVVFLRKENCMYQ
ACPAQDCFKKVIDQQNGLYRCEKCDSEFPSFKYRMILSANIADFQENQWVTCFQESAEAI
IGQTTAYIGELKEKNEQAFEEVFQNANFRTFIFKIRVKLETYNDESRIKATVMDVKPVDY
REYGKRLIMNIKRNALMM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagacacttcc
ataaaacctgtcctccaggtcattaacatccgtcccatcactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctctcctctttcatgttggcaaca
cagttgaaccatctcgttgaggaagaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtaattattttgatggagttagac
gttttgaaatcagctgaagcagttggattaaagattggcaatcccgtgccctataatgaa
ggacacgggcagcagcaggtagttccttctccggcctcagcagccaacccgccagccagc
aagccccagcaacagaatgggagctcagggatgggttccactgcatctaagacttatggt
gcctcaaagacatttggaaaagctggagctaccaacctagcgaacacaggttctggagga
acacaggtcaaagtggtacccatcgccagcctcaccccttaccaatccaagtggactatc
tgtgctcgagttaccaacaaaagtcagatccgtacctggagtaattcccggggggaaggg
aagctcttctccctagaactagttgatgaaagtggtgaaatcagagctactgctttcaac
gagcaagtggacaagttttttccccttattgacatgaacaaggtctattacatctctaaa
ggcaccctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgacc
ttcaataatgagacttccgtcgtgccctgtgaagatggtcatcatttaccaacagttcag
tttgatttcacagcgattggtgacctggagaataagtctaaagattctctgatagacata
attgggatctgcaagagctatgaagatgccaccaaaatcacagtgaaatctaacaacaga
gaagtttcgaagagagacatctatttgatggacatgtcagggaaagtggtgaccgctact
ctgtggggagaagatgctgatagatttgatggttctagacaacctgtgatggctatcaaa
ggagccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtc
attgtgaatcctgacatcccggaggcctataagcttcgtggatggtttgactctgaagga
caagccttagatggtatttccatctctgatctaaagagtggaggaacaggaggtagcaac
accaactggaaaactctatatgaggttaaatcagagaacctaggccatggtgacaaggcc
gactattttagctgtgtggcgacagttgtgtttcttcgcaaagagaactgtatgtatcaa
gcctgcccagctcaggactgctttaagaaagtgattgatcaacagaatggattgtaccgc
tgtgagaagtgtgatagtgaatttcccagcttcaagtaccgcatgatcctgtcagcaaat
attgctgattttcaagagaatcagtgggtcacctgtttccaggagtctgcggaggccatc
attggacaaaccactgcttatattggggagttaaaagagaagaatgagcaagcgtttgag
gaagttttccagaatgccaacttccgaactttcatattcaagatcagggtgaaactagag
acctacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactac
agagaatatggcaaaaggctgatcatgaacatcaagagaaacgcactgatgatgtga
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