Lynx rufus (bobcat): 124512961
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Entry
124512961 CDS
T08475
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124512961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124512961
Spliceosome [BR:
lruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124512961
Complex C
U5 SnRNP specific factors
124512961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
124512961
NCBI-ProteinID:
XP_046936580
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagccccg
ttgccagactacatgtcggaggagaagctgcaggagaaagcccgaaaatggcagcaatta
caggccaaacgctatgcagaaaagcggaagtttggatttgtggatgctcagaaggaagac
atgcccccggaacacgttaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgccatgacaaaagggtctacttgggtgccctaaagtatatgccccatgcagtactg
aaactcctggagaacatgcctatgccttgggagcagattcgagatgtgcctgtgctgtac
cacatcactggagccatttcttttgtcaatgagattccctgggtcattgagcctgtctac
atctcccagtgggggtcaatgtggattatgatgcgccgtgaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaagagccacctttggattatgctgac
aacatcctagatgttgagccactggaggccattcagctagagctggaccctgaagaggat
gcccctgtattggattggttctatgaccaccagccactgagggacagccggaagtatgtg
aatggctccacttaccagcgctggcagttcacactgcccatgatgtccactctctatcgc
ctggccaatcagctcctgacagacttagtagatgacaactatttctatctgtttgatttg
aaggccttctttacctccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaacctccaggatgaagactggaatgaattcaatgatattaac
aagatcatcatccggcagcctatccgcactgaatacaagattgctttcccttatctgtac
aacaatcttccacaccatgtccacctcacctggtaccatactcctaatgttgtgttcatc
aaaactgaggatcctgatctgccagctttctactttgatcctttaatcaacccaatttct
cataggcactctgtcaagagccaggaaccgttgcctgatgatgatgaggagtttgagctc
ccagagtttgtggagcccttcctgaaggacacacccctctacacagacaatacagccaat
ggcattgccctcctctgggccccacggccctttaacctacgctctggtcgcacccgccgg
gccctggatatcccccttgtcaagaactggtatcgagagcattgtcctgctgggcagcct
gtgaaagtgagagtctcctaccagaaactgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccaaaagaagagatacctgttccgttccttcaaagccaccaaa
ttcttccagtccacgaagctggactgggtggaggtggggctacaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaaaaacctcaactatctgcacctggattac
aacttcaatcttaagcctgtcaagaccctcaccaccaaggaaagaaagaaatctcgtttt
gggaatgctttccatctctgtcgagaagttctgcgtttaactaagctggtggtagacagt
catgtacagtatcgtttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcccatgtggggcagctgacgggcatgtaccgctacaagtacaagctgatgcgg
cagattcgcatgtgcaaggacctgaaacatctcatctattaccgcttcaacacgggccct
gtagggaagggccctggctgtggcttctgggctgcaggctggcgggtctggctgtttttt
atgcgtggcatcacccctttgttggagcggtggctaggcaacctcctggcccgacagttt
gaaggccgacactctaagggggtggcaaagactgtaacaaagcagcgagtggagtcacat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgaggga
attaaacagaacaaggcccggacgatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtgcctgggctgccaacacccatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggactaacactgcccactacaaccgagaacgg
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctgggccgcctcact
cggctctacctgaaggcagaacaggagcggcagcacaactacctgaaggatgggccgtac
atcacagcagaggaggcggtggcagtgtataccaccactgtgcactggctggagagccgg
aggttctcacccatcccgttccccccactctcctacaagcatgataccaagttgctcatc
ttggccttggagcggctcaaagaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccatgaggcattgtcccgc
atcaaacgtcacctcctcactcagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacttggtgccggtttatgatgtggagccactggagaagatcactgacgcc
tacctggaccagtacctgtggtatgaagctgacaagcgccgccttttcccaccgtggatc
aagcctgctgacacagaaccaccccctctgcttgtttacaagtggtgccaaggcatcaat
aatctgcaggatgtgtgggagacaagtgagggtgagtgcaatgtcatgctggaatcgcgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaataggctgctgcgactcatc
gtagaccacaacatagccgactacatgactgccaagaacaacgtggtcatcaactataag
gacatgaaccatacaaattcttacgggatcatcagaggcctgcagtttgcctcattcatt
gtgcagtactatggcctggtgatggatttgcttgtgttgggattacatcgggccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggatatagccaccgag
gctgcccaccccatccgtctcttctgcagatacattgatcgcatacatattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcatcctgatccc
aacaatgaaaatatcgttggctataataacaagaagtgctggccccgagatgcccgcatg
cgcctcatgaagcacgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacgatcagtgactacagttcagtgggagaacagcttcgtatctgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctgcctaaatgc
cgcaccagctatgaggagttcactcacaaggatggggtctggaacctacagaatgaggtt
actaaagagcggacagctcagtgtttcctgcgagtggatgatgagtcaatgcagcgtttc
cacaaccgcgtgcgtcagattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacaccgctcttattggccttatgacatattttcgggaagctgtagtgaac
acccaggagctcctggacttgctagtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaattccaagatgccgagtcgtttccctcctgttgtgttctatacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtactcatcccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctacatacaaccatgggagagcgagttcatt
gattctcagagggtctgggctgagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctagaggattcatgggatcgtggcattcctcgaatcaac
acccttttccagaaggaccggcacacgttggcgtatgataaaggctggcgtgttcgaact
gactttaagcagtaccaggtcttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtggaaggcattctggaacacacactcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtctatgaagtggaagaagctaaccaat
gctcagcgatcgggattgaaccagattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaatgtatatgtaggctttcaggtgcagctggacctgacaggtatc
tttatgcatggcaagatccccacactgaagatctctctcatccagatcttccgagctcac
ttatggcagaagatccacgagagcattgtgatggacttatgtcaggtatttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagacaattcacccccgaaagtcctat
aagatgaattcttcctgtgcagatatcctgctttttgcctcctataagtggaatgtctcc
cggccctcattgctggcagactccaaggatgtgatggacagtaccaccactcagaagtat
tggattgatatccagttgcgctggggggactatgactcccacgacattgaacgctatgcc
cgggccaagttcctggactacaccacagacaacatgagtatctatccttcacccactggt
gtgctcattgccattgacctggcctataacctgcatagtgcctatggaaactggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgcaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaactatggtgagctcttctccaaccaaattatctggtttgtg
gatgacactaatgtctacagagtgactattcacaagacctttgaagggaatttgacaacc
aaacctatcaatggggccatcttcatcttcaatccacgcacagggcagctgttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtctggggcagctggctaagtggaag
acggctgaggaggtggctgccctgatccgatctctgcctgtggaggagcagcccaagcag
atcattgtcactaggaagggcatgctggacccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcggagctccagctccctttccaggcttgtctcaaggtggaa
aagtttggggacctcatccttaaagccactgaaccccagatggttctttttaatctctat
gatgactggctcaagactatctcatcttatacggctttctcccgcctcatcttgattctg
cgtgccctgcacgtgaacaatgaccgggcgaaggtgatcctgaagccagacaagacgacc
attacagagccacaccatatctggcccactctgactgacgaggagtggatcaaggtggaa
gtgcagctcaaagatctgatcttggccgactacggcaagaaaaacaatgtgaacgtggca
tcactgacacaatcggaaattcgagacatcatcctgggtatggagatctcggcaccatca
cagcagcggcagcagatagcagagatcgagaagcagaccaaggaacagtcacagctgaca
gcaacacagactcgtactgtcaacaagcatggtgatgagatcattacttctaccaccagc
aactatgagacgcagactttctcctctaagactgaatggcgggttagggccatctctgct
gccaaccttcacctgaggaccaatcatatctatgtttcatctgatgacatcaaggagact
ggttatacctatatccttcccaagaacgtgcttaagaagttcatctgcatatctgacctg
cgggcccaaattgcaggatacctgtatggggtcagcccaccggataacccccaggtgaag
gagatccgctgcatcgtgatggtaccgcagtggggcactcaccaaaccgtgcatcttcct
ggccagctgccccagcatgagtacctcaaggaaatggaacccttaggatggatccacact
cagcccaatgagtccccccagctgtcaccccaggatgtcaccacccatgctaagatcatg
gctgacaacccatcttgggatggtgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcacactgacagcctataagctgacccccagtggctatgaatggggtcgccag
aacacagacaagggcaacaatcccaagggctatctaccctcgcattatgaaagggtccag
atgctgctgtcagaccgcttccttggcttttttatggtccctgcccagtcctcatggaac
tacaactttatgggtgtgcggcatgatcccaacatgaagtatgagttgcagctggcaaac
cccaaagagttctaccacgaggtgcacagaccttcccacttcctcaacttcgctctcctg
caagagggcgaggtctactccgcggatcgagaggacctctatgcctag
DBGET
integrated database retrieval system
