Lynx rufus (bobcat): 124513103
Help
Entry
124513103 CDS
T08475
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124513103
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lruf01009
]
124513103
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124513103
Protein phosphatases and associated proteins [BR:
lruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124513103
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124513103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
RCR
V_ATPase_I
EphA2_TM
MAP17
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
124513103
NCBI-ProteinID:
XP_046936842
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQAGGTIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtagtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatcccctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccgcaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacggccatactgcaggtc
acagtaagtgatgtaaatgataacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcctgtgggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
aggctctttgctttaaataatactactgggctgattacagttcagaggtccctagatcga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccactcctgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatacgataaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaaacccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcggacattgtttatcagcttggaccgaatgcctccttctttgatttggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaggagcggttcattttt
acagtaactgccagggacaatggaacccctcccctccaaagccaagcggccgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctctccattctaaatgacaatgataattttgtgctg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacttttgatgtcaaagccactgatggaggacaaccacctcgttcctccaccgcaaaa
gtaactatcaatgtcatggatgtcaatgacaatagcccagttgtcatttctccaccttcc
aacacttcttttaagttggtacccctctcagccattcctggctctgtggtagcagaagtt
tttgcagtggatatcgacactgggatgaacgccgaactgaagtatacaattgtgagtggg
aacaacaaaggcttgtttcggatcgatccagtaacaggtaacatcactctggaagagaag
ccagcacctactgatgtgggcttgcaccgtttggtggtcaatataagtgacctgggatac
cctaagtctttgcacacactcgtgcttgtttttctttacgttaatgacaccgctgggaat
gcctcctatatctatgacttgattcgcaggactatggagaccccactggataggaacata
ggggacagtagccaaccctatcaaaatgaggactatctcaccatcatgattgccatcgtc
gcaggggccatggtggtcatagtggtgatcttcgtcaccgtcctggtgcgatgtcgccat
gcatcgaggttcaaagcagctcagaggagcaagcaaggtgctgagtggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttacaattgaagagtccaaacctgacgatgcagttcacgaacctatc
aatgggacaataagcctgcccgctgagctggaggagcaaagtataggaagatttgactgg
ggcccagcccctccaacaaccttcaagcctaacagccctgacctggccaagcactacaaa
tctgcttctccacagcctgcttttcatcttaaaccagacactccggtttccgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctc
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccacattcaggagaat
gaagaaagccattacgagtcgcagcgccgcgttacgtttcacctccccgacggctcccag
gaaagctgcagtgacagtggtctaggcgaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgagttctacgaccaggcctctccggac
aagaggaccgaagcagatggcaactccgaccccaactctgatgggcctttgggtccccga
ggattagctgaagccacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggcccatatcaacaccctaaatctcctctctcaacc
tttgcaccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacacccttacc
agagcctggaaagaagatagcaacaggaaccagttcaatgaccgtaagcagtatggctcc
aatgaaggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaag
tcttataagcaagcaggaggtactattgagagtccgaaggagcaccaactctaa
DBGET
integrated database retrieval system
