Lynx rufus (bobcat): 124513117
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Entry
124513117 CDS
T08475
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124513117
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124513117
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
90S particles
Helicases
124513117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
RnlA_toxin
Motif
Other DBs
NCBI-GeneID:
124513117
NCBI-ProteinID:
XP_046936819
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MDAHDLFRRLGVGAKFDVRRFSADAARFQVGKRKYDFDSSEVLQGLDFFGNKKSVPGEFG
ASRTHQELQDEEKKESLTERKREQNKKKRKMMTSEITSQEEGSIQWISSVEAKIEDKKIK
RENKLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILD
AGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPVLMQLKQPTNKGFRALIISP
TRELANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQ
DPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQ
WCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSI
ERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVN
LVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYI
KGFQKLPSKQKKKMIKKPLERESISTTPKYFLEKAKNKQKKVTGQNSKKKVAREDKS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctttttcgccggcttggcgtgggggccaaattcgacgtgagacgt
ttctcggcggacgcggcgcgattccaggtaggaaaaaggaaatatgactttgattcttca
gaggtgctgcagggactggacttctttggaaacaagaagtctgtcccaggtgagtttgga
gcatcaagaactcatcaggagcttcaagatgaagagaaaaaagaaagcctaactgaaagg
aagagggagcagaacaaaaaaaagaggaagatgatgacttcagaaattacttctcaagaa
gaaggttctatacagtggatatcatctgtggaagcaaaaattgaagataaaaaaattaaa
agagaaaataaactaacttcagggaagttggagaatctcagaaaagaaaagataaacttc
ttccggaataaacacaaaattcatgtccaaggaactgatcttcctgacccaattgctaca
tttcagcaacttgaccaggaatataaaatcaattctcgactacttcagaacattctagat
gcaggcttccagatgcctacaccaatccaaatgcaagccattccagttatgctgcatggt
cgagaacttctggcttctgctcctactggatctggaaagactttggcttttagcattccc
gttttgatgcaactaaaacaacccacaaataaaggcttcagagccctgattatatcacca
acacgagaacttgccaaccagattcaccgagagttagtaaaaatctctgagggaacagga
ttcaggatacacatgatacacaaagcagcagtggcagccaagaaatttggacctaaatca
tctaagaagtttgatattcttgtgactactccaaatcgactaatctacttattaaagcag
gatcctccaggaatagatttgacaagtgttgagtggctggtggtagatgaatcagacaaa
ctgtttgaagatggcaaaactgggttcagagaccagctggcttccattttcctggcctgc
acatcccataaggtcagaagagctatgttcagtgcgacttttgcatatgatgtggagcag
tggtgcaaactcaacctggacaatgtcatcactgtatccattggagcaaggaattctgca
gtagagactgtagaacaagagcttctctttgttgggtctgagactgggaagcttctggcc
atgagagaacttgttaaaaagggtttcaacccacccgttcttgtttttgttcagtccatt
gaaagggctaaagaactatttcatgagctcatatatgaaggtataaatgtggatgttatt
catgctgagagaacacagcaacagagagataacacagtccacagcttcagagctggaaaa
atctgggttcttatttgtacagccttgctggccagagggattgattttaaaggtgtgaac
ttggtgatcaactatgactttccaaccagctcagtggaatatatccacaggatcggtcga
actggaagagcagggcataaaggaaaagctgttacatttttcactgaggatgataagcca
ttattaagaagtgttgccaatgttatacagcaggccggatgtcctgtaccagaatacata
aagggtttccaaaaactaccaagcaaacaaaagaaaaagatgattaagaagccattggaa
agggagagcattagtacaactccaaaatatttcttagaaaaagctaagaataaacagaaa
aaggtcactggtcagaacagcaagaagaaagtagctcgtgaagacaaaagttaa
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