Lynx rufus (bobcat): 124513160
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Entry
124513160 CDS
T08475
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03440
Homologous recombination
lruf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124513160
03460 Fanconi anemia pathway
124513160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124513160
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124513160
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124513160
FA (Fanconi anemia) pathway
Downstream FA components
124513160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
124513160
NCBI-ProteinID:
XP_046936880
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MMASMWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSVALLCS
ALAWQQSFNGKPVDKSLSKKAEEPLSCCCACHSKNFTNIDLKQGTSHHFNCPSTPPSERY
GTSSTCQEDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEK
EVRHLDAKVASGKTTKLNSPLGKKNSFSPQNPPGHCSRCCCSTKQGNSQGYSNTTKKDHG
GKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKC
LELLDGKNGKSCYFYHGVHKISDQHTLQTLEGMCKAWDIEELVSLGKKLKACPYYTAREL
IEDAHIVFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLWFA
RDELDTMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERDYESSCKIWSGREMLLNLH
KMGITTATFPILQGHFSSVLQKEEKVLPIHGREETREVPIISASTQIILKGLFMVFDYLF
RQNSKFADDYKVAIQQTYSWINQTDSSDKNEFFAQAKSRKRARQKTAVRVLNFWCLNPAV
AFSDINGKVWTIVLTSGTLSPMKSFSSELGVTFSIQLEANHVINNSQVWVGTIGSGPKGR
NLCATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLE
LVKTVIVEPPAGEKIDFDELLQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARA
VITIGIPFPNVKDLQVVLKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKND
WGALILVDDRFSSNPARYISGLSKWIRQQVQYHSTFESAMESLAEFSKKHQKVIDVSKED
RKFIQDSGSTLEVAGLKDNTLTYLSEAASHLPPENPREGEAKMCVQELHCPKITTSPSLP
GDIISRKDQDDPILLEESAQTMKAERIVISRSTSPTFNKQTKRVNWSSFNSLGHYITDEI
LTATPKSRSPEDCASSASPFETEKGCKTVLPLTDKCESSSLTVDTSLRAVEPCPQSEIVI
SPIKIDATLLKENYSKQLFYEETLGPDIELSLVSKEAKLSTSNRASDTEAEDESIYFTPE
LYDPEDTNEEKNEQVESDRDNRLANNSKCILAEDLFEIRTEKGVXQEIKAEDCTKLNRLM
NIXSKIDDNGSNIKTTHINELDLGKTRETDTKEY
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcaatgtggtctgaatatacaattggtggggtgaaaattacctttccttat
aaagcttacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
caacattgtttactggagagccctacaggaagtgggaaaagtgtagccttactttgttct
gctttagcatggcaacaatcttttaatggaaagccggtggacaaaagcttaagtaaaaaa
gctgaggaaccattgtcatgttgttgtgcatgccattcaaagaattttacaaacattgac
ttgaaacaaggaacttcacatcatttcaattgtccaagtacaccaccttctgaaagatat
ggcacttcatcaacttgtcaagaagactctcctgaaaaaactacgttggctgcaaagcta
tctgccaagaaacaggcttccataaaaagagatgaaaatgatgattttcaagtagagaag
aaaagaattcgacccttagaaactacacagcagataagaaagcgtcattgttttgaaaag
gaagtgcgtcatttggatgcaaaagttgcttcaggaaagaccacaaaactcaactctcca
ttaggaaagaaaaactccttttctccacaaaatccccctggtcactgttccaggtgttgt
tgttctactaaacaaggaaacagtcaaggttactcaaataccactaagaaggatcatggg
gggaaatccaagatacccaaaatatattttgggacgcgcacacacaagcagattgctcag
attactagagagctccggagaacagcatactcaggggtcccaatgactattctttccagc
agggatcatacttgtgtccatccagaagtagtgggcaacttcaacagaaatgaaaagtgc
ctggagttgctggatggaaaaaatggcaaatcctgctatttttatcatggcgtacataaa
attagtgatcaacacacattacagactctggaagggatgtgcaaagcctgggatatagaa
gaacttgtcagcttgggaaaaaaactaaaggcatgtccgtattacacagcacgggaacta
atagaagatgctcacatagtattttgtccctacaactatcttctagatgcacaaataagg
gaaagtatggatatcaatctgaaagaacagattgtcattttagatgaagctcataacatt
gaggactgtgctcgggagtcagcgagttacagtgtaacagaagttcaactttggtttgct
cgagatgaattagatactatggtcaacaataatataaggaagaaagaccatgaaccccta
cgagctgtgtgctatagcctaattaattggttagaagcaaactctgaacatcttgtggaa
agggattatgaatcatcctgtaaaatatggagtggaagggaaatgctcttaaatttacac
aaaatgggtatcaccactgctacttttcccattttgcagggacatttttcttctgtcctt
caaaaagaagaaaaagtcttaccaattcatggtagagaggagacaagagaagtaccgatt
attagtgcttcaactcaaataatactcaaaggactttttatggtgtttgactatcttttt
aggcaaaacagcaaatttgcagatgattataaagttgctattcaacagacttattcttgg
ataaatcagactgattcttcagataaaaatgaattctttgctcaagcaaaaagtaggaaa
cgtgcaagacagaaaactgcagttcgcgtgctaaatttttggtgcttaaatccagctgtg
gccttttcagatattaatggcaaagtttggaccattgttttgacatctgggacattatca
ccaatgaaatccttttcatcagaacttggtgttacttttagtatccaactggaggctaat
catgtcattaataactcacaggtttgggttggcaccattgggtcaggtcccaagggtcgg
aatctctgtgctaccttccagcacacagaaactttcgagtttcaggatgaagtgggcgca
cttgtgttatctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttac
aagttattagaaaagttaaaagaacgttggctctctactggtttatggcataatctagag
ttggtgaaaacagtcattgtagaaccaccggcaggagaaaaaattgattttgatgaatta
ctacagatgtactatgatgcaatcaaatacaaaggagagaaagatggagccctcttggta
gcagtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgct
gtcataacaatagggattccttttccgaatgtgaaagatctacaggttgtactaaagcga
cagtacaatgatcagcactccaaactgagaggtcttttacctggtcgtcaatggtatgaa
attcaagcatatagggccttaaaccaggccctaggcaggtgtattcgacacaaaaatgat
tggggagctcttattcttgtggatgatcgctttagtagtaaccctgcacggtatatatct
ggactttctaaatggatacggcagcaggttcagtaccattcaacctttgaaagtgcaatg
gagtccttggctgaattttccaaaaagcaccagaaagtcattgatgtatccaaagaggac
agaaagtttatacaggacagtgggtctacacttgaagtggccggtttgaaggacaacacc
ttaacttacttatcagaagcagcaagccatctaccaccagaaaatcctagggaaggtgaa
gcaaaaatgtgtgtccaagaactacactgtcctaaaataaccacaagtccatctctacca
ggagacatcatctcccgaaaggaccaagatgatcctatattattggaagagtctgcccag
acaatgaaagcagaaagaattgtgatttccagatcgacaagcccaaccttcaacaaacag
acaaagagagttaattggtctagctttaattctttgggacattatattactgatgaaatt
ctgactgcaacacctaaatccaggtcaccagaggactgtgcctctagcgcttcccctttc
gaaacagaaaaaggatgcaaaacagtcttaccactcactgataaatgtgagtcctcatct
ctgacggtagacacatcattgagggcagttgaaccatgccctcagtcagaaatcgttatt
tcaccaataaagattgatgctactcttcttaaagaaaattattccaaacagctgttctat
gaagaaaccctgggtccggacattgaattgtctctagttagtaaagaagctaaactttct
acttcaaatagagcttctgacacagaagcagaggatgaatctatctattttacacctgaa
ctttatgatcctgaagatacaaatgaagaaaagaatgaacaagttgaaagtgatagagat
aatagattggctaataattcaaaatgcattttagctgaagatctttttgaaattagaact
gagaaaggagtcnnccaagaaataaaagctgaggattgcacaaagttgaatagactcatg
aatattnaaagtaaaattgatgacaatggtagtaatataaaaacaactcatataaatgaa
ttagacctgggaaaaactcgtgaaacagatacaaaagaatattaa
DBGET
integrated database retrieval system
