Lynx rufus (bobcat): 124513186
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Entry
124513186 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124513186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124513186
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124513186
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124513186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
FANCL_C
Motif
Other DBs
NCBI-GeneID:
124513186
NCBI-ProteinID:
XP_046936921
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGKDAEKLMEFVYKNR
KAHVRIELKEPPTWPDYDVWILLTVVGTIFVVILASVLRIRCRPHHNRPDPLQQRTAWAI
SQLATRRYQASCRRARAEWPDSSSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRVCVD
PWLHQHRTCPLCMFNIVEGDSFSQSLGHSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLG
PSRSAVARPPRSGPFPTSQEPGTGPRHHRLPRAAHPRAPGEQQRLAVAQHPYAQGWGLGR
LRCTSQHLSACPAPPRRVRPHDSSGSGESYRTERSGYMADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGEPRGEETQPRVTSRPRSLDSVVPTG
ETQVSSHVHYHRHRHHHYKKRFQWHGRKPGPETGLPQSRPAIPRTQPQPEPPSPDQQAAR
SNPAAPSGQLPNPQRPKALVEAAAGPADASSPSPSSLFHLQKSSLPVRHPQRKRRGCLSE
PPPASQPQDLTAHPTCQVFPHYATSLAYPWSPEAHPLIFGPPGLERRLLPETPGPCYPSS
QPVWLCLTPRQSLEPHPPGEGPCEWSCGTLEGRSCPYPHCQVPPAQPGSEEEELEELCEQ
AV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtattggcagcagcggtggagtctgaaaga
tcagcagaacagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtttttgctggtgttgctgaaataactccagcagaagga
aaattaatgcagtcccaccccctgtacttgtgcaatgccagcgatgacgacaatctggag
cctggattcatcagcattgtcaagctggagagtccccaacgggccccgcgcccctgcctg
tcactggccagcaaggcccggatggcaggggagcgaggagctagtgcggtcctctttgac
atcactgaggatcgagctgctgctgagcagctacagcaacccctggggctgacttggcca
gtggtgttgatctggggtaaagatgccgagaagctgatggagtttgtgtacaagaaccga
aaggctcatgttaggattgagctgaaggagcccccaacctggccagattatgatgtgtgg
atcctcctgacggtggtgggcaccatctttgtggtcatcctggcttcagtgctgcgcatc
cgatgccgcccccaccacaacaggccggatccccttcaacagcgaacagcctgggccatc
agccagctggccaccaggaggtaccaggccagctgcaggagggcccgggctgagtggccg
gactcaagtagcagctgtagctcagcccctgtgtgtgccatttgcctggaggagttctct
gagggccaggagctacgggtcatttcttgcctccatgagttccatcgtgtgtgtgtggac
ccctggctacatcagcatcggacttgccctctctgcatgttcaacatcgtagagggtgat
tcattttcccagtccctgggacactctcgatcttatcaggaaccaggccggagactccac
ctcattcgccagcatcccggccatgcccactaccacctacctgctgcgtacctgttgggc
ccttcccggagtgcagtggctcggcccccgcgatctggtcccttcccaacctcccaggag
ccaggcacaggcccccggcaccaccgtctccccagagccgcacatcctcgggctccgggt
gagcagcagcgcctggcggtggcccagcatccctacgcgcagggctgggggctaggccgt
ctccgatgcacctcgcagcacctctccgcttgcccagcacccccacgccgggtcaggcct
cacgacagcagcggttctggagaaagctaccgcacggaacgcagtggctacatggcagac
gggccagccagcgactccagttcggggccctgtcatggctcttcaagtgactcagtggtc
aactgcacggacatcagtctgcagggcatccatggcagcagttctaccttccgcagctcc
ctgagcagtgactttgaccccttggtgtactgcagccctgaaggggagccccggggggag
gagacccagcctagggtgacctctcggccccgttctttggactcagtggtacccacagga
gaaacccaggtttccagccacgtccactaccaccggcaccggcaccaccactacaaaaag
cgcttccagtggcatggccggaagcctggcccagaaactgggttgccccagtccaggcct
gccattcctcggacacagccccagccagagccgccttcccctgatcagcaagctgccaga
tccaacccagctgccccttcaggacagctccccaatccacaacggcccaaggcccttgtc
gaagcagccgcaggcccagctgatgcctccagccccagtcccagcagcctcttccacttg
cagaaatccagcctccctgttcgacatccacagaggaaaaggcgagggtgcctctcagag
ccccccccagcctctcagccccaggacttgactgcacacccaacttgccaggttttcccc
cattacgctaccagcttggcatacccttggtccccagaggcccatccattgatctttgga
cctccaggcctggagaggaggctgctaccagaaaccccaggcccttgttacccaagttca
cagccagtgtggttgtgtctgactccacgccagtccctggaaccacacccacctggggaa
gggccttgtgaatggagttgtggcaccctggagggcaggtcatgcccttacccacactgc
caggtgccgccagcccagcctggctcggaggaggaggagcttgaggagctgtgcgaacag
gctgtgtga
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