Lynx rufus (bobcat): 124513425
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Entry
124513425 CDS
T08475
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
lruf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124513425
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124513425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124513425
03036 Chromosome and associated proteins [BR:
lruf03036
]
124513425
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124513425
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124513425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
Motif
Other DBs
NCBI-GeneID:
124513425
NCBI-ProteinID:
XP_046937369
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MEELDGEPTVTLIPGVNSKKKQMCFDWGPGEMLVCETSFNKKEKSETVPGCPFIYIIRKD
IDVYSQILRKLFNESHGIFVGLQRVEEELTGKSRKAQLPCFLSLQDAPCSCCMSFHFCRL
VRVSKNYRSVIRACMEEMHQAAIAAKDPASGRQFSSQVSILSAMELIWNLCEILFIEVAP
AGPLLLHLLDWVRLHVCEVDSLLADVLGSENPSKHESFWNLVTILVLQGRLDEARQMLSK
EADVSPTSAGMCRILGDLMRTMPVLSPGNTQTLTELELKWQHWHEECERHLQDGTFASSP
HLESLCKIMLGDEAALLEQKELLNNWYHFLVTRLLYSHPTVKPIDLHFYAQSSLDLFLGG
ESSPEPLDNILMAAFEFDIHQVIKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNM
REFLLLEYASGLFAHHSLWQLGVDYFDYCPELGRVSLELHIERIPLSTEQKALKVLRICE
QRQMTEQVRSICKILAMKAVRNNRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSD
LDLIDNLGPAMMLSDRLTFLGKYREFHRFYGEKRFFDAASLLLSLMTSQIAPRCFWVTLL
TDALPLLEQKQVIFTTEQTYELMRCLEDLASGRPVRGEPGAQRLQEDIENTKLEMLRLAL
ARNLARAIIKEGSLEGS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactcgacggcgagccgacggtcactttgattccaggagtgaattccaagaag
aagcaaatgtgttttgactggggtccaggagagatgctggtgtgtgaaacctccttcaac
aaaaaagaaaaatcagagactgtgccaggctgcccgtttatctatatcatccgaaaggat
atagatgtttactctcagatcttgagaaaactcttcaatgaatcccatggaatctttgtg
ggcctccagagagttgaagaagaattgactggaaaatccagaaaagctcaacttccttgc
tttttgtcactacaagatgctccatgttcctgttgtatgtcatttcatttttgtagattg
gtccgagtgagtaagaactaccgatcagtcataagagcctgtatggaggaaatgcaccag
gctgcaattgctgctaaagatccagccagtggtcgccagttcagcagccaggtctccatt
ttgtcagcaatggagcttatttggaatctttgtgagattctttttattgaagtagcccca
gccggccctctcctcctccacctccttgactgggtccgactgcatgtatgtgaggtggac
agtttgttggcagatgtcctgggcagtgagaatccaagcaagcatgagagcttctggaac
ttggtgaccatcttggtgctacagggccggctggatgaggcccggcagatgctctccaaa
gaagccgacgtcagccccacctctgcgggcatgtgccgaattctgggggacctgatgagg
acaatgcccgttctcagtcctggaaacacccagacgctgacagagctggaactgaagtgg
cagcactggcatgaggaatgtgagcgtcatctccaggatggcacgttcgcctccagtcct
cacctggagtctctctgcaagatcatgctgggagatgaagctgccttgttggagcaaaag
gaacttctgaataactggtatcatttcctagtgacccggctcctgtactctcatcccaca
gtaaaacccattgacctgcacttctatgcccagtccagccttgacctgtttctgggagga
gagagcagcccagaacccctggacaacatcttgatggcggcctttgagtttgacatccac
caagtgatcaaggagtgcagcattgccttaagcaactggtggtttgtggcccatctgaca
gacctgctggatcactgcaagctcctccagtcacacaacctctacttcggatccaacatg
agagagttcctcctgctggaatatgcctccggcctgttcgctcatcatagcctctggcag
ttgggagtggattactttgactactgccctgagctgggccgagtttccttggagctgcac
attgagcggatccctttgagcactgagcagaaagcccttaaggtgctgcggatttgtgag
cagcggcagatgactgagcaagttcgcagcatttgtaagatcttagccatgaaagctgtc
cgcaacaatcgcctgggctctgccctgtcttggagcatccgagccaaggacgcagccttt
gccacgctggtgtcagacaggttcctcagggattactgtgagcgaggctgcttttccgat
ctggatctcattgacaaccttgggccagccatgatgctcagtgatcgactgacattcttg
ggaaagtaccgtgagttccaccgattttatggggagaagcgcttttttgatgcggcttct
cttctcctgtcattgatgacttctcagattgctccacgatgtttctgggtaacactacta
acagatgccctgccccttttggaacagaaacaggtgatttttacaacagagcaaacatat
gagctgatgagatgtctggaggacttggcctcaggaaggccagtgcggggagagcctggt
gctcagcgactccaggaggacatagagaacaccaagctggaaatgctgagacttgctctt
gcgcgaaatcttgcccgggccattataaaagaaggctcactggaaggctcctga
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