KEGG   Lynx rufus (bobcat): 124513492
Entry
124513492         CDS       T08475                                 
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
  KO
K17908  autophagy-related protein 18
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf04136  Autophagy - other
lruf04140  Autophagy - animal
lruf05010  Alzheimer disease
lruf05014  Amyotrophic lateral sclerosis
lruf05016  Huntington disease
lruf05017  Spinocerebellar ataxia
lruf05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124513492
   04136 Autophagy - other
    124513492
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124513492
   05014 Amyotrophic lateral sclerosis
    124513492
   05016 Huntington disease
    124513492
   05017 Spinocerebellar ataxia
    124513492
   05022 Pathways of neurodegeneration - multiple diseases
    124513492
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lruf04131]
    124513492
   03029 Mitochondrial biogenesis [BR:lruf03029]
    124513492
Membrane trafficking [BR:lruf04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    124513492
Mitochondrial biogenesis [BR:lruf03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    124513492
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_NWD2_C WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_RSE1_2nd EIF3I Beta-prop_IFT140_1st DUF5711 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd BCAS3_WD40
Other DBs
NCBI-GeneID: 124513492
NCBI-ProteinID: XP_046937482
LinkDB
Position
Unknown
AA seq 446 aa
MEAEAADGPPGGVEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYNYSSNILSIRLNRQRLLVCLEEA
IYIHNIKDMKLLKTILDIPANPSGLCALSINHSNSYVAYPGSLTTGEIVLYDGHSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGRKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTNSRPEEPSTWTGYMGKMFMAASNYLPAQVSDMMNQ
DRAFATGRLHFSGQRNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTTEENKENDLRPPLPQSYAATVARPSTSSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaggccgaggccgcggatggccccccgggcggggtcgaggcggcgctcagctgcttc
tctttcaaccaggactgcacatccctagcaattggaaccaaagccggttataagctgttt
tctttgagttctgtggagcaactggaccaagtccatggaagcaacgaaatcccggatgtc
tacatcgtggagcgcctcttctccagcagcctggtcgtggtggtcagtcacacaaagccg
cggcagatgaacgtctatcacttcaagaaaggcacggagatctgtaattacaactattcc
agcaacatcttgtccataaggctgaaccggcagaggctgctggtgtgcctggaggaggcc
atctacatccacaacatcaaagacatgaagctcctgaagaccatcctggatattcctgcc
aacccatcaggtctctgtgccctctctatcaaccattccaattcttacgtggcctatcct
ggaagcctgaccacgggcgagattgtgctttacgacggacactccctgaaaacggtctgc
acgattgctgcccacgaggggacgctggccgccatcaccttcaatgcctcgggctccaaa
ctagcgagcgcatctgaaaaaggcaccgtcatccgggtgttctctgtacccgacgggcga
aagctctacgagtttcggagaggaatgaaaaggtacgtgacaatcagctccctagttttt
agtatggactcgcagttcctctgcgcctcaagcaacaccgagaccgtgcacatcttcaag
ctggagcacctcaccaacagccgacccgaggagccctccacctggactggctacatggga
aagatgttcatggccgcttccaactacctccccgcccaggtgtccgacatgatgaaccag
gacagggcctttgccaccgggcgcttgcacttctctgggcagaggaacatctgcaccctc
tccacgatccagaaactgccaagactcctggtcgcgtcttccgacggacacctttacatc
tacaatttggaccctcaggacggaggagaatgtgtcttaatcaagacccacagcttgctt
agctcaggaacaacggaagaaaacaaagaaaatgacctcagacctccattacctcagtct
tatgcagcgaccgtggccagaccaagcacgtcttctgcctctaccgtgccaggttattct
gaggacggcggggccctccgaggagaggttattcctgaacatgagtttgcgacgggacca
gtatgccttgacgacgagaatgaatttccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcatga

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