Lynx rufus (bobcat): 124513773
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Entry
124513773 CDS
T08475
Name
(RefSeq) transcription factor SOX-3 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124513773
Transcription factors [BR:
lruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124513773
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124513773
NCBI-ProteinID:
XP_046937733
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MRPARDNASGATSLRVPADLARSTLASLPFPPDPPAPRPPSAPPTESPGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGAGGPAAPGGAGKSGANAAGGANAG
GGNGGGSSGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLL
TDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAA
AAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPATMSSPPPPPALPQMHR
YDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAAA
AAAMSLGPMGTVVKTEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDAADAASPLPGG
RLHSVHQHYQGAGTAVNGTVPLTHI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcggccagctcgagacaacgcatcaggtgcgactagcctgcgggttcctgccgacttg
gcgcggagcactttggcaagcctgcccttcccgcctgacccgccggccccccggccccca
agcgcccctccgacggagtccccaggccttttcaccgtggccgctccagccccgggagcg
ccttctcctcccgccactctggcgcaccttcttcccgccccggccatgtacagcttgctg
gagaccgagctcaagaacccggtggggccacccaccccagcggcaggcgcgggcggcccc
gcagcccccggcggcgcaggcaagagcggcgcgaacgcagccggcggagcgaacgcaggc
ggcggcaacggcgggggttcgagtggcgggggcgggggcagcgaccaggaccgcgtgaag
cggcccatgaacgccttcatggtgtggtcccgtgggcagcggcgcaagatggccctggag
aaccccaagatgcacaactccgagatcagcaagcgcttgggcgccgactggaaactgctg
accgacgccgagaagcggccgttcatcgacgaggccaagcgactgcgcgccgtgcacatg
aaagagtacccggactacaagtaccggccgcgccgcaagaccaagacgctgctcaagaag
gacaagtactccctgcccggaggcctgctgccccccggcgccgccgccgccgccgcggcc
gccgccgccgccgccgccgccagcagcccggtgggcgtgggccagcgcctggacacgtac
acacacgtgaacggctgggccaacggcgcgtactcgctggtgcaggagcagctgggctac
gcgcagcccgctaccatgagcagcccgccgccgccgcccgcgctgccgcagatgcaccgc
tacgacatggccggcctgcagtacagccccatgatgccgcccggcgcccagagctacatg
aacgccgccgccgccgccgccgccgcctcgggctacgggggcatggcgccctcggccgcc
gccgccgcggccgccgcctacgggcagcagcccgccaccgccgccgccgccgccgccgcc
gcggccgccatgagcctgggccccatgggcacggtggtgaagaccgaacccagctcgccg
ccgcccgccatcacgtcgcactcgcagcgtgcgtgcctcggcgacctgcgcgacatgatc
agcatgtacctgccacccggcggggacgcggctgacgccgcttcgccgctgcccggcggc
cgcctgcacagcgttcaccagcactaccagggcgctgggactgccgtcaacggaacggtg
ccgctgacccacatctga
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