Lynx rufus (bobcat): 124513894
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Entry
124513894 CDS
T08475
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03420
Nucleotide excision repair
lruf04120
Ubiquitin mediated proteolysis
lruf05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124513894
09124 Replication and repair
03420 Nucleotide excision repair
124513894
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124513894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124513894
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124513894
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lruf04147
]
124513894
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
124513894
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124513894
TCR (transcription coupled repair) factors
Cul4-CSA complex
124513894
Exosome [BR:
lruf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124513894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
124513894
NCBI-ProteinID:
XP_046937854
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MKSVCPVTSGFSSPNPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSGSNSSNER
EDFDSTSSSSTPPLQPRDSASPSTSSFCLGVSVATSSHVPIQKKLRFEDTLEFVGFDAKM
AEESSSSSSSSSPTAATSQQQQLKNKSILISSVASVHHANGLAKSSTTTSSFANSKPGSA
KKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISA
NLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTY
VLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSM
LSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ
TTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQW
IEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK
RPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKR
LLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQVKYMQNQNVP
GNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVL
KAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARV
LAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDA
AIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYI
A
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgtctgcccagtcacttccggtttttcttcccccaatccctcagctgctgct
gctgctcaggaggtcagatctgccactgatggtaataccagcaccactccgcccacctct
gccaagaagagaaagttaaacagcagcagcagtagcggcagtaatagtagtaacgagaga
gaagactttgattccacctcttcctcttccactcctcctttacaacccagggattcggca
tccccttcaacctcgtccttctgcctgggggtttcagtggctacttccagccacgtaccg
atacagaagaagctgcgttttgaagacaccctggagtttgtagggtttgatgcgaagatg
gctgaggaatcctcctcttcttcctcctcatcttcaccaactgctgcaacatctcagcag
cagcaacttaaaaataagagtatattaatctcttctgtggcttcggtgcatcatgcaaac
ggcctagccaaatcttctaccaccacttctagctttgctaacagcaagcctggctctgct
aagaagttagtgatcaagaactttaaagataagcctaaattaccggagaactacacagat
gaaacatggcagaaactgaaagaagcggtggaagctatccagaatagtacttcgattaag
tacaatttagaagaactctatcaggctgtggaaaatctctgttcctacaagatttctgca
aacttgtacaaacagctgagacagatttgtgaagatcacatcaaagcacaaattcatcag
ttcagagaggattcattggatagtgttctttttctaaagaagattgatagatgctggcaa
aaccactgcagacaaatgatcatgattagaagcatttttttgtttctggatagaacttac
gttcttcagaattcaatgctaccctcgatttgggacatgggactagagttatttagggct
catattataagtgatcagaaagtccagaataagacaattgatggcattcttctcttgatt
gagagggaaaggaatggtgaagcaattgatagaagtttactccgaagccttttgagcatg
ctgtctgacttgcaaatttatcaggattcttttgaacaacggtttttggaagaaactaac
cggctctatgcagctgaaggccaaaaattaatgcaggaaagagaggttcctgaatatctt
catcatgttaacaaacgtctagaagaagaagcagacagacttattacttacttagatcag
accacccagaagtcattaattgctactgtagaaaaacaacttctaggtgaacacttaaca
gcaattcttcagaaaggtttaaataacctccttgatgaaaaccgaattcaagatttatct
ctcctgtatcagctctttagtagagttcgaggtggagttcaggttctcttgcaacagtgg
attgaatacattaaggcatttggcagcactattgtaattaatcctgaaaaagataaaacc
atggttcaagaattactggattttaaagataaggttgaccatataattgatatttgtttt
ctgaaaaatgaaaaattcatcaatgccatgaaagaagcatttgagacattcattaacaaa
agaccaaacaaacctgctgaacttatagctaagtatgtagattcaaagcttcgcgcaggc
aacaaagaagctacagatgaagaacttgaaaaaatgttggataaaattatgatcatattt
agatttatctatggtaaggatgtttttgaggccttctataagaaagatttagccaagcgc
ctgttagttgggaaaagtgcatctgtagatgctgaaaaatcaatgttgtccaaacttaaa
catgaatgtggagctgctttcaccagcaaacttgaaggaatgtttaaagacatggaactt
tctaaagacatcatgattcagttcaaacaggtaaaatatatgcaaaaccagaatgtacct
gggaatattgaattaactgtgaatatcctgacaatgggttattggccaacatatgtgcct
atggaagtccacttaccaccagagatggtaaaacttcaggagattttcaagacattttac
ctaggcaaacatagcggcaggaaacttcagtggcagtcaaccctaggacactgtgtgcta
aaggcagaatttaaagagggtaaaaaagaactccaggtctctctctttcaaaccctggtg
ctgctaatgtttaatgagggagaggagttcagtttagaagagatcaagcaggctactgga
atagaggatggagaattaaggagaacactgcagtcattggcctgtggcaaagctagagtt
ctggcaaaaaatccaaagggcaaagatattgaagatggtgacaagttcatttgtaatgat
gatttcaaacacaaacttttcaggataaagatcaatcaaatccagatgaaagaaacggtt
gaagaacaagcaagcactacagaaagagtatttcaggacagacagtaccaaattgatgct
gcaattgttcgaatcatgaagatgagaaagacgcttagccacaatcttcttgtttcagaa
gtgtacaaccagttgaaatttccagtaaagcctgctgatcttaagaagagaatagaatcc
ttaattgatcgggattacatggaaagagataaagaaaatccaaaccaatacaattatatt
gcataa
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