Lynx rufus (bobcat): 124514307
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Entry
124514307 CDS
T08475
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124514307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lruf02000
]
124514307
Transporters [BR:
lruf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124514307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_15
AAA_23
SRP54
AAA_29
MukB
Motif
Other DBs
NCBI-GeneID:
124514307
NCBI-ProteinID:
XP_046938271
LinkDB
All DBs
Position
Unknown
AA seq
2490 aa
AA seq
DB search
MGFVRQIQLLLWKNWTLRKRQKIRFVVELIWPLSLFLLLIWLRNVNPLYSQHECHFPNKA
MPSAGMLPWLQGMFCNVNNPCFQSPTPGESPGIVSNYNDSILARVFRDFQELLMDAPESQ
HLGHVWKELQTFSQLMDTLRTHPERVAGRGIRIRDVLKDEETLTLFLMKNIGLSDSVVYL
LVNSQVRPEQFAHGVPDLTLKDIACSEALLERFLIFSQRRGAQTVRDAMCSLSQGTLQWV
EDTLYANVDFFKLFRVLPTLLDSSSPGINLRSWGRILSVMSSRIQEFVHQPSVQDLLWVT
RPLMQAGGPETFTQLMSILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPVY
SYDKRTTTFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAARRILQNANSTFEE
LERLRKLVKAWEEVGPQIWYFFDKSTQMTMIRDTLQNPTVKDFLNSQLDEEGITVETVLN
FLYKGPQENQADDVANFDWRDVFNITDRTLRLASRYLECLILDKFESYDDEIQLTQRALS
LLEENRFWAGVVFPDMYPWTSALPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
FRYIWGGFAYLQDMIEQGITRSQAQVEVPVGIYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWSTWFLDSFSIMSMSIFLLTTFIM
HGRILHYSNPFILFLFLLAFSTATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPHILCF
AWQDRMTADLKMAVSLLSPVAFGFGTEYLVRFEEQGLGLQWGNIGNSPMEGDEFSFLMSM
KMMLLDAALYGLLAWYLDQVFPGNYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPI
TEEMEDPEHPEGTHDSFFERELPGLVPGVCVKNLVKIFEPYSRPAVDRLNITFYENQITA
LLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETSLDAVRQSLGMCPQHNILFHHLTV
AEHILFYAQLKGKSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGGA
KVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYC
SGTPLFLKNCFGTGFYLTLVRKMKNIQSQKTGYEGTCSCASQGFSTRCPAHIDEISPEQV
LDGDVNELMDMVQHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLAELGLS
SFGISDTPLEEIFLKVTEDSDSGLLFAGGAPQKRENASLRHPMEKARQIPLGSNGCSAEP
APHPEDHSSSKPEERSRFNTGAQLIIQHMQALLVKRFHHTARSHKDFLAQIVLPATFVFL
ALMLSIIVPPFGEYPALILHPWMYGQQYTFFSLDQPGSEQLAALADVLLNKPGFGNRCLK
EEWLPEYPCGNSTPWKTPSVSPNITHLFQKQKWTPDDPSPSCRCSTREKLTMLPECPEGA
GGLPPPQRIQHSSEILQDLTNRNISDFLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKL
PVLPITGEALVGFLSHLGQIMNVSGGPITREASKEMPAFLKHLETEDNIKVWFNNKGWHA
LVSFLNVAHNAILRASLHKDKNPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVVAICV
IFAMSFIPASFVLYLIQERVNKAKHLQFISGVSPITYWLTNFLWDIMNYSVSAALVVGIF
IGFQKKAYTSPENLPALVALLMLYGWAVIPMMYPASFLFDIPSTAYVALSCANLFIGINS
SAITFILELFENNQTLLRFNAMLRMLLIIFPHFCLGRGLIDLSLSQAVTDVYARFGEEHS
SNPFQWNLIGKNLVAMAVEGVVYFLLTLLIQHHFFLIRWVAEPAKEPIIDEDDDVAEERQ
RIISGGNKTDILRLNELTKIYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLT
GDTTVTSGDATIAGKSILTNISDVHQSMGYCPQFDAVDDQLTGREHLYLYARLRGVPADE
IEKVTNWSIKSLGLSLYADRLVGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQAR
RMLWNIIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYI
VTMKIKSPKEDLLPDLNPVEQFFQGNFPGSVQRERHYNMLQFQVSSSSLARIFRLLISHK
DSLLIEEYSVTQTTLDQVFVNFAKQHTEIHDLPLHPRAAGASRQAKDDKSPSDLLHRSDL
HTTHSLWPERNRGQLEMREPLPCGHLTRPAQQQKQTHAGQAADSKADSFREKPRLTCSPG
TPDDSTSEERLDKSLLSGCGCKRQAEFLAQFLSGSRLLLMVVFVAPSTVAAFRTWQRYLI
LGAPTLGVPAKADPDCHSFLLESPGGEPCRAPGPSPPRPAPPRAPRAPSALCAARPPGAT
PATGQGPVTRGQASRSLLAAPPRPAPPRDG
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgtgagacagatccagcttttgctctggaagaactggaccctgaggaaaagg
caaaagattcgctttgtggtggaacttatatggcctttatctttatttctgctcttgatc
tggttaaggaatgtcaacccactctacagccaacatgaatgccattttcccaacaaggcg
atgccctcagcaggaatgttgccgtggcttcaggggatgttctgcaatgtgaacaatcct
tgttttcaaagtcccaccccgggagaatctcctggaattgtgtcaaactataacgactcc
atcttggcaagagtgtttcgagattttcaagaactccttatggatgcaccagagagccag
caccttggccatgtttggaaagaacttcaaactttttcccaactcatggacaccctccgg
actcaccctgagagagttgcaggaagagggatacgaattcgggatgtcctaaaagatgaa
gaaacactgacgctatttctcatgaaaaatattggcctgtctgactcagtcgtctacctt
ctggtcaactcccaagttcgtcctgagcagtttgctcatggagtcccagacctgacactg
aaggacattgcctgcagcgaggccctcctggagcgcttcttaatctttagccagcgccgt
ggggcacagacagtgcgtgatgccatgtgctccctctcccagggcaccctccagtgggtg
gaagacactctgtatgccaacgtggacttcttcaagctcttccgtgtgcttcccacactc
ctggacagcagttctccaggtatcaatctgagatcctggggaagaatattatctgttatg
tcatcaagaattcaagagttcgttcatcaaccgagtgttcaagacttgctgtgggtgacc
aggcctctcatgcaggctgggggtccagagaccttcacacagctgatgagcatcctgtct
gacctcttgtgtggctacccagagggaggaggctctcgagtgttctccttcaactggtat
gaagacaataactataaggccttcctagggattgactccacaaggaaagatcctgtctat
tcttatgacaaaagaacaacgaccttttgtaatgcattgatccagagcctggagtcaaac
cctctcaccaaaatagcctggagggcagcaaaacctttgctgatgggaaaaatcctcttt
actccagattctcctgcagctcgcagaatactgcagaatgccaactcaacttttgaggag
ctggagcgccttaggaagttggtcaaagcttgggaagaagtaggcccccagatctggtac
ttctttgacaagagcacacagatgaccatgatcagagacaccctgcagaacccaacagtg
aaagacttcttgaatagtcagcttgatgaggaaggtattactgtagaaactgtgctgaac
ttcctgtataagggtcctcaagagaatcaggctgatgacgtggccaactttgactggagg
gatgtatttaacatcactgatcgcaccctacgcctggctagtagatatctggagtgcttg
atcctggataagtttgaaagctatgatgatgaaattcagctcactcaacgagccctgtct
ctgctggaggaaaacaggttctgggctggtgtcgtgttccctgacatgtatccctggacc
agtgccctgccaccccacgtgaagtacaagatccggatggacatagatgtggtggagaaa
accaataagatcaaggacaggtactgggattctggtcccagagccgatcctgtggaagat
ttccgatacatctggggagggtttgcctatctgcaggacatgatcgaacaggggatcaca
aggagtcaggcgcaggttgaagttccagttggaatctatctccagcagatgccttatccc
tgctttgtggatgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcctggatctactctgtctccatgactgtaaagagcatcgtcttggagaaggagttg
cgactgaaggagaccttgaaaaatcagggtgtctccaatgcagtgatttggtctacctgg
ttcctggacagcttctctatcatgtcaatgagcatcttccttctgaccacattcatcatg
catggaaggatcctacattacagcaatccattcatcctcttcctgttcctgttggccttc
tccactgctacgatcatgcagtgcttcctgctcagcaccttcttctccagggccagcctg
gcagcagcctgtagtggtgtcatctacttcaccctctacctgccacacattctctgcttc
gcctggcaggaccgaatgacggctgatctgaagatggctgtgagcctgctgtctcctgtg
gcatttgggtttggcactgagtacctggtacgctttgaggagcaaggcctggggctgcag
tggggcaatatcgggaatagccccatggaaggggatgaattcagcttcctgatgtctatg
aagatgatgctccttgatgctgctctgtatggactgcttgcctggtacctcgaccaggtt
tttccagggaactatggaaccccacttccttggtacttccttctgcaagagtcctattgg
cttggtggtgaaggctgttcaaccagagaagaaagggccctggaaaagacggaacccata
acagaggaaatggaggatccggaacacccagaagggacccatgactccttctttgaacga
gagcttccaggcttggttcctggggtatgtgtgaaaaatctggtaaagatttttgagccc
tacagcaggccagccgtggaccgtcttaacattaccttctatgagaaccagatcactgcg
ttgcttggtcacaatggagcagggaaaaccaccaccttgtccatcctgacgggtctgttg
ccaccaacatcagggactgtgctcattgggggaaaggacattgaaaccagcctggatgca
gtccgacagagtcttggcatgtgtcctcagcacaacatcctgttccaccacctcacagtg
gctgaacacatcctgttctacgcccagctgaaaggaaagtcctgggaggaggctcagctg
gagatggaagccatgttggaggacacaggcctccaccacaagaggaatgaagaagctcag
gatctgtcaggtggcatgcagaggaagctgtctgttgccattgccttcgtgggaggtgcc
aaggtggttattctggatgagcctacctctggggtggacccctattcgagacgctcaatt
tgggacctgcttctgaagtatcgatcaggcagaaccatcatcatgtccactcatcacatg
gatgaggctgacctcctcggggaccgcatcgccatcatttcccagggaaggctctattgc
tcaggcaccccactcttcctgaagaactgctttggcacaggcttctacttaactttggtg
cgcaagatgaaaaacatccagagccaaaaaacaggctatgaggggacctgcagctgtgca
tctcagggtttctctaccaggtgtccagcccacatagacgagataagtccggaacaagtc
ttagatggggatgtgaatgaactgatggatatggtacagcaccatgttccagaggcaaag
ctggtggaatgcattggtcaagaacttatcttccttcttccaaataagaatttcaagcag
agagcatacgccagccttttcagagagctcgaggaaacactggccgaactggggctcagc
agttttggaatttctgacactcccctggaagagatttttctgaaggtcacggaagattct
gattcaggactcttgtttgctggtggcgctccacagaaaagagaaaacgccagtctccga
caccctatggagaaggccagacagattcccctgggctccaatggctgctctgcagagcca
gctcctcacccagaggaccactcttcctcgaagccagaggaacgcagccggttcaacaca
ggagcacagctcatcatccaacatatgcaggcattgctggtcaagcgattccaccacact
gctcgcagccacaaggacttcctggcccagattgtgctcccggccacttttgtgtttttg
gctctgatgctttccatcatcgtccctccctttggtgaatatcctgctttgatccttcac
ccctggatgtatgggcagcagtacactttcttcagtttggaccagccaggcagtgagcag
cttgcagcacttgcagacgtcctcctgaacaagccgggctttggcaaccgctgcctgaag
gaagagtggcttccggagtacccctgtggcaattcaaccccctggaagactccgtctgtg
tccccaaacatcacccacctgttccagaagcagaaatggacaccagacgacccctcgcct
tcctgcaggtgcagcaccagagagaagctcaccatgctccctgagtgcccagagggcgca
ggggggctcccaccccctcagagaatacagcacagctctgaaattctacaagatcttaca
aacaggaacatctctgacttcttggtaaaaacatatcctgctcttatacgaagcagctta
aagagcaaattctgggtcaatgaacagaggtacggaggaatttccatcggaggaaagctc
ccggttcttcccatcactggggaagcgctcgttggatttttaagccaccttggccagata
atgaatgtgagcgggggccccatcaccagagaggcctctaaagaaatgcctgctttcctg
aaacatctagaaactgaagacaacattaaggtatggtttaacaacaaaggttggcatgcc
ctggtgagctttctcaatgtggctcataacgccatcttacgggccagcctgcacaaggac
aagaaccctgaggagtatggcatcaccgtcataagccagcccctgaacctgaccaaggag
cagctctcagagatcacagtgctgactacttcggtagatgctgtggttgccatctgtgtg
attttcgccatgtccttcatcccagccagctttgtcctttatttgatccaggagagggta
aacaaagccaagcacctccagtttatcagcggagtgagccccataacctactggctgacc
aacttcctctgggacattatgaattatagtgtgagcgctgctttggtggtgggcatcttt
attgggtttcagaagaaagcctacacttctccggaaaatcttcctgcccttgttgcactg
ctcatgctgtacggatgggcagtcattcccatgatgtacccagcatccttcctgtttgat
atccccagcacagcctatgtggccttgtcttgtgctaatctgttcatcggcatcaacagc
agtgccatcaccttcatcttagaattgtttgagaataaccagacgctactcagattcaac
gccatgctgaggatgctgctcattatcttcccccacttctgcctgggccggggcctcatt
gatttgtcactgagccaggccgtgacggatgtctatgcccggtttggtgaggagcactct
tcaaatccattccagtggaacctgattgggaagaacctggttgccatggcagtagaaggg
gtggtgtacttcctcctgactctcctcatccagcaccacttctttctcatccgatgggtt
gccgagcctgctaaggagcccattatagatgaagatgatgatgtggctgaagaaagacaa
agaattattagtgggggaaataaaactgatatcttaaggctaaatgaactgaccaagatt
tattcaggctcctccagcccagcggtggacaggctgtgtgtcggagtccggcctggagag
tgctttggtcttctgggagtgaatggagctggcaaaacaaccacgttcaagatgcttact
ggggacaccacagtgacttcaggcgatgccactatagcaggcaagagtattttaaccaat
atatctgatgtccatcaaagtatgggctactgtcctcagtttgatgcagtcgatgaccag
ctcacagggcgagaacatctttatctttatgcacgtcttcgaggtgtaccagcagatgaa
atcgaaaaggtgacaaactggagtattaagagcctgggcctgtctctttatgcagaccgc
ctggttggcacctatagtggaggcaataagcggaaactctccacagccattgcactgata
ggctgcccgcctctggtgctgctggatgagcccaccacgggcatggatccccaggcacgc
cgcatgttgtggaacatcatcgtgagcatcatcagagaagggagagctgtggtcctcaca
tcccacagcatggaagaatgtgaggctctgtgtacccggctggccatcatggtaaaaggc
acctttcagtgtctgggcaccattcagcacctcaagtacaagtttggagatggctacatt
gtcacaatgaaaatcaaatccccaaaggaagacttgcttccggacctgaatccagtggag
cagttcttccaggggaatttcccgggcagcgtgcagagggagagacactacaacatgctc
cagttccaggtctcctcctcctccctggcccggatcttccggttgctcatctcccacaag
gacagcctgctcatcgaggagtactcagtcacgcagaccacactggaccaggtatttgtg
aattttgctaaacagcatactgaaattcatgacctccctttgcaccctcgagctgctgga
gcaagccgacaagccaaggatgacaagagtccatctgacctcctccacaggtctgatctc
cacaccactcattcgctatggccggaaagaaaccgcgggcagctggaaatgcgggagcct
ttgccatgtggtcatctgaccagaccagctcagcagcagaaacaaacacatgcaggccag
gcagcggactccaaagcggactctttcagagagaaaccaagactgacttgctcacctgga
acacctgacgactccacgagtgaggagaggctggacaagagcctcctgtcaggctgcggt
tgcaaaaggcaggccgagttcttggcccagtttttgtctggttccagactcttgctgatg
gtggtgtttgtggccccttccacagttgctgccttcaggacttggcaacgctacttgatc
ttaggagcgccaacccttggtgtgcccgccaaggctgacccagactgtcactcctttctc
cttgaaagtcctgggggggagccctgccgagcgccaggtccctccccgccccgccccgcc
ccgccgcgcgcgccccgcgcgcccagcgctctctgcgccgcgcgcccgcccggcgccacg
cccgccacaggccaagggccagtcacccgcgggcaggcgtcccgcagccttctcgccgcc
ccgccccgcccggccccgccgcgggacgggtaa
DBGET
integrated database retrieval system
