Lynx rufus (bobcat): 124514418
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Entry
124514418 CDS
T08475
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124514418
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Cadherin related
124514418
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
EphA2_TM
Glyco_hydro_16
V_ATPase_I
Cadherin_C_2
Toxin_R_bind_N
PFF1_TM
SID-1_RNA_chan
Zip
Motif
Other DBs
NCBI-GeneID:
124514418
NCBI-ProteinID:
XP_046938358
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MPRRPALAPAPAAWLLLAGLLSGGGVWATRVNKHKPWLEPTYHGIVTENDNAVLLDPPLI
ALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQA
YDCGQGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDA
DCSPQFSQICSYEVVTPDVPFAVDKDGYIKNTEKLNYGKEHQYKLTITAYDCGKRRAAED
VLVKVSVKPTCTPGWQGWNERIEYEPGTGSLALFPNVHLETCDEPVASVQATVELETGHI
GKGCDRDTYSEQSLHRLCGAASGTTELLPSPSGSLNWTVGLPTDNGHDSDQVFEFNGTQA
VRIPDGVVSVNPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLTFL
LRQDPSEEKKYKPAEFHWKLNQVCDEEWHHYVLNVELPSVTLYVDGVSHEPFSVTEDYPL
HPSRIETQLVVGACWQGGDLHMTQFFRGNLAGLTVRSGKLADKKVIDCLYTCKEGLDLQA
PEDGRGVKIHTNPSQLALTLEGDDVGELDKAMQHIAYLNSRQFPTPGIRRLKLTSTVKCF
NGAPCASVPPVDGYVMVLQPEEPKISLSGVHHFARAASEFESPEGVFLFPELRIISTITR
EVEPEGDGDEDPTVQESLVSEEIVHDLDTCEVTVDGEELNPAQESLEVDMARLQQKGIAV
SASDLGMVFTGVDTMASYEEVLRLLRYRNWHTRSLLDRKFRLVCSELNGRYISNEFQVEV
NVIHTAGPMEHASHMAAQPQFVHPERHAFVDLSGHNLASPHPFAVVPSTATVVIVVCVSF
LVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEE
EEEEESEAGEEEDDITSAESESSEEEEGEHGDQQSANRQQQLEWDDSTLSY
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgccctgcgctcgcgccggccccggccgcctggctgctgctggccgggctg
ctgagcggcggcggggtctgggccacgcgagttaacaagcacaagccgtggctcgagccc
acctatcatggcatcgtcacagaaaacgacaacgcggtgctcctcgaccctccgctgatc
gccctggataaagacgcacctctgcggttcgcaggtgagatttgtggatttaaaattcat
gggcagaatgtcccctttgatgcagtggtagtggataagtccactggcgagggaataatt
cgctcaaaagagaaactggactgtgaactacagaaagactacacattcaccatccaggcc
tatgactgcggccaggggccggatggcgccaacgcgaaaaagtctcataaagcaactgtc
catattcaggtgaacgacgtgaacgaatatgcacctgtgttcaaggagaagtcctacaaa
gcgaccgtcatcgaggggaagcagtatgacagcatcctgagggtggaggccgtggacgct
gactgctccccccagttcagccagatatgcagctatgaagtcgtcactccagacgtgccg
tttgctgtcgacaaagatggttacataaaaaacacagagaagctaaactatgggaaagaa
caccagtacaagctgaccatcaccgcctacgactgcgggaagagaagggcagcggaagac
gtcttggtgaaggtcagcgtcaagcccacctgcaccccagggtggcaaggatggaacgag
aggatcgaatatgaacctggcacgggctctttggccctcttcccaaatgtccacctggag
acgtgcgacgaacccgtggcctcagtgcaggcgacggtagagctggagaccggccacatc
gggaaaggctgtgaccgtgacacctactctgaacagtctcttcaccggctgtgtggcgct
gcgtctggcaccaccgagctgctcccgtccccaagtgggtccttgaactggactgtcggc
ctccccactgacaacggccacgacagtgaccaggtcttcgagttcaacggcacccaagca
gtgaggatcccagatggtgtcgtttctgtcaacccgaaagagccttttacgatttccgtg
tggatgaggcatgggccttttggcaggaagaaggagaccattctctgtagttcagacaaa
acagacatgaaccggcaccattattcactctacgtccacggctgccgcctcactttcctc
ctccgtcaggatccttcagaagagaagaaatacaaacctgcagaattccactggaaattg
aatcaggtctgtgatgaggagtggcatcactacgtcctcaacgtggagctcccaagcgtg
actctctatgtggacggtgtttctcacgagcccttctctgtgaccgaagattacccgctt
catccatccaggattgaaacccagctcgtggttggggcttgctggcaaggtggcgacctg
cacatgacccagtttttccggggtaatctggctggcctgactgtccgttctgggaaactc
gcagataagaaggtgattgactgtctgtacacctgcaaagaagggctggacctgcaggcc
cccgaggacggcagaggcgtgaagatccataccaaccccagtcagttggcgttgaccttg
gagggagatgatgttggggagctggataaagccatgcagcacatcgcctacctgaactca
cggcagttccccacacctgggatccggagactcaaactcaccagcacagtcaagtgtttc
aatggagctccttgcgcctcggtgcccccggtggatggttacgtgatggtgttgcagcca
gaggagcccaagatcagcctgagtggggtccaccactttgctcgagcggcttctgaattc
gaaagcccagagggggttttccttttccctgagcttcggatcatcagcaccatcacgaga
gaagtggagcccgaaggcgacggggacgaggaccccacagttcaagagtcgctcgtgtcc
gaggagatcgtgcatgacctggatacctgcgaggtcaccgtggacggggaggaactgaac
ccagcacaggagagcctggaggtagacatggcccgcctgcagcagaagggcatcgcggtg
agcgcctccgacctgggcatggtcttcacaggcgtggacaccatggccagctacgaggag
gttctgcgcctcctccgctatcggaactggcacaccaggtccctgcttgaccggaagttc
aggctcgtctgctcagagctcaatggccgctacatcagcaacgagtttcaggtggaggtg
aacgtcattcacacggccggccccatggagcacgccagccacatggccgcccagccgcag
ttcgtccacccggagcgccatgccttcgtcgatctctcgggtcacaacctggccagcccc
cacccgttcgcagttgtccccagcaccgccactgttgtcattgtggtgtgtgtcagcttc
ttggttttcatgattatcctgggagtcttccggatccgggctgctcatcagcgaacgatg
cgggaccaggacaccgggaaggagaacgagatggattgggatgactccgctctgaccatc
accgtgaaccccatggagacgtacgaggaccagcacagcagcgaggaggaggaggaggag
gaagaggaggaggagagtgaagccggggaggaggaggatgacatcaccagcgccgagtcg
gaaagcagcgaggaggaggagggggagcacggggaccagcagagcgcgaaccggcagcag
cagctggagtgggacgactccaccctgagctactga
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