KEGG   Lynx rufus (bobcat): 124514713
Entry
124514713         CDS       T08475                                 
Name
(RefSeq) calnexin isoform X1
  KO
K08054  calnexin
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf04141  Protein processing in endoplasmic reticulum
lruf04145  Phagosome
lruf04612  Antigen processing and presentation
lruf04918  Thyroid hormone synthesis
lruf05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124514713
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124514713
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    124514713
  09152 Endocrine system
   04918 Thyroid hormone synthesis
    124514713
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    124514713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lruf03110]
    124514713
   04131 Membrane trafficking [BR:lruf04131]
    124514713
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:lruf04091]
    124514713
Chaperones and folding catalysts [BR:lruf03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   124514713
Membrane trafficking [BR:lruf04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    124514713
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    124514713
Lectins [BR:lruf04091]
 L-type lectins
  124514713
SSDB
Motif
Pfam: Calreticulin Connexin FAM176 MAP17 PFF1_TM DUF6080
Other DBs
NCBI-GeneID: 124514713
NCBI-ProteinID: XP_046938889
LinkDB
Position
Unknown
AA seq 596 aa
MEGKWLLCMLLVLGMTIVHAHEGHDDDMIDIEDDLDDVIEEVEDSKSKPDTSAPPSPKVT
YKAPVPTGEVYFADSFDRGTLSGWILSKAKKEDTDDEIAKYDGKWEVDEMKETKLPGDKG
LVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQF
HDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYT
LILNPDNSFEILVDQSVVNSGNLLNDMTPSVNPSREIEDPDDQKPEDWDERPKIPDPDAV
KPDDWDEDAPAKIADEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPK
CESAPGCGLWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPF
SAIGLELWSMTSDIFFDNFIICGDRRVVDDWANDGWGLKKAADGAAEPGVVGQMIEAAEE
RPWLWVVYILTVALPVFLVILFCCSGKKQSSPVEYKKTDAPQPDVKEEEEEKEEEKDKGD
EEEEGEEKLEEKQKSDAEEDGGTVSQEEEDRKPKAEVIRRKSTVCISSNSSESTFP
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggaagggaagtggttgctttgtatgttactggtccttggaatgacaattgttcatgct
cacgaaggccatgatgatgatatgattgatattgaggacgacctcgatgatgttattgaa
gaggtagaagactcaaaatcaaaaccagataccagtgctcctccgtctccaaaggtcacc
tacaaagctccggttccaacaggggaagtgtattttgctgattcctttgacagaggaact
ctgtcagggtggattttatccaaagccaagaaagaggacactgatgatgaaattgccaaa
tatgatggaaagtgggaggtagatgaaatgaaggaaacaaagcttccaggtgataaagga
cttgtattgatgtctcgggccaagcatcatgccatctccgcgaaactgaacaagcccttc
ctgtttgataccaagcctctcattgttcagtatgaggttaatttccaaaatggaatagaa
tgtggtggtgcctatgtgaaactgctttccaaaaccccagaactcaacctggatcagttc
cacgacaagaccccttatacgattatgtttggtccagataaatgtggagaagactataaa
ttgcacttcatcttccgccacaaaaaccccaaaacgggtgtatacgaagaaaagcacgct
aagaggccagatgcagatctaaagacctattttactgataagaaaacacatctttataca
ttaatcctgaatccagataatagttttgaaatactagtggaccagtctgttgtgaatagt
ggaaatttgctaaacgacatgactccttctgtaaatccttcacgtgaaattgaggaccca
gatgaccagaagcctgaggactgggatgaaagaccaaaaataccagatcctgatgctgtc
aaaccagatgactgggatgaagatgcccctgctaagattgcagatgaagaagctacaaaa
cctgaaggctggttagatgatgagcccgaatatgtacctgatccagatgcagagaagccg
gaggattgggatgaagatatggatggagaatgggaggctcctcagattgccaaccctaag
tgtgagtcggcccctgggtgtggtctctggcagcgacctatgattgacaaccctaattat
aaaggcaaatggaagcctcccatgattgacaatcctaactaccagggaatctggaagccc
cggaaaataccaaatccagacttctttgaagatctggaacctttcaaaatgactcctttt
agcgctattggtttggagctgtggtccatgacctcagacattttttttgacaactttatt
atttgcggtgatcgaagagtagttgatgattgggccaatgatggatggggcctgaagaaa
gctgccgacggagctgctgagccaggtgtggtggggcagatgattgaggcggccgaggag
cgcccgtggctctgggtggtctacatcctgacagtagctctgcctgtgtttcttgttatc
ctcttctgctgctctggaaagaaacagtcaagtcctgtggaatataagaaaactgatgcc
cctcaaccagatgtgaaggaggaagaagaagagaaggaagaggaaaaggacaagggagac
gaggaggaggaaggtgaagaaaaacttgaagagaagcagaaaagtgatgctgaagaagat
ggtggcactgtcagtcaagaggaggaggatagaaaacctaaagcagaggtaatacgaagg
aaaagtacagtttgtatctcaagcaactcaagtgaaagtacatttccctag

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