Lynx rufus (bobcat): 124514815
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Entry
124514815 CDS
T08475
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04120
Ubiquitin mediated proteolysis
lruf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124514815
04120 Ubiquitin mediated proteolysis
124514815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124514815
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124514815
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
U-box type E3
124514815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
124514815
NCBI-ProteinID:
XP_046939063
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPLGPPIAASAPGPSQSLGLNVHNM
TPATSPIGASGTVVGAMDAGRDGQVSRSSSVRGPRVWQEGMSSCGALHAGAVTGVAHRSQ
SSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRR
EKRSVSDKEPSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSD
FKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAARSPDRNLLLTTGSNPGASPMFC
GVGSFGASSLSSLGASGGTGTWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKM
CSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSVLQPSFLVPYMLCRNLPYGFMQELVR
TTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVA
SLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSGPAITLENTRVVSQ
SLQHYLELGRQELFKILHSILLNGETREAALGYMAAVVNANMKKAQMQTDDRLVSTDGFM
LNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNATMEDVNDWLAELYGDQPP
FSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLAT
RHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLLLRILDPAYPDITL
PLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRN
PYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFY
DKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKR
IHEVQEEMKNKDQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKP
FLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARF
AKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSD
APDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELK
EQIHAWMREKQNSDH
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgcctcgcacgacttgctggtgga
cagacctcccagcccaccaccccgctcacctcgccccagagggagaacccgctggggcct
cccatagcagcatcagccccgggcccctcccagagccttggtctcaatgtccacaacatg
accccagctacctccccaataggtgcatcaggcactgtggtgggagctatggatgcaggc
agagatgggcaagtctcacgcagcagcagtgtccgaggaccccgtgtctggcaggagggg
atgtcctcgtgtggagctctccacgctggtgcggtcacaggagtagctcatcgaagccag
agcagtgaaggagtcagttctctcagcagctcgccctccaatagccttgaaacccaatct
cagtctctctcacgttcccagagcatggatatcgatggtgtctcttgtgaaaaaagcatg
tcccaggtggatgtggattcaggaatcgaaaatatggaggttgatgaaaacgatcggaga
gaaaaaaggagcgtcagcgataaggagccttcatcgggttctgaagtgtccgaagaacag
gccttacagctggtctgtaagatctttcgtgtctcctggaaggaccgggacagagacgtc
atcttcctttcttctctttctgcacaatttaagcagaacccaaaagaagtgttctccgat
tttaaggacttgattggccagattttaatggaagtgctaatgatgtctacccagactaga
gatgaaaatccatttgccagtctgacggccacatcgcagccaattgcggcggctcggtcc
ccggacagaaatctcctgctaactaccggctccaacccaggagcgagccccatgttctgc
ggtgtgggctccttcggtgccagctcgttgtctagtttgggagcctctggtgggacaggt
acttgggattcctacagtgaccatttcaccatcgagacctgcaaggagacagacatgctg
aactacctcatcgagtgttttgaccgagttggaatagaggaaaaaaaagcaccaaagatg
tgcagccagccagcggtcagccagcttctgagcaacatccgctcacagtgcatatcccac
accgcgctagttctacaaggttccctcacacagccaaggtccgtgctccagccgtccttc
ctggtgccgtatatgctgtgccggaatctcccgtatggcttcatgcaggagctggtgaga
accactcaccaggatgaagaagtgttcaagcagatctttatccccattttacaaggcctg
gctctcgctgccaaagagtgctccctcgatagtgactactttaaataccccctcatggct
ttaggcgagctctgtgaaaccaagtttgggaagacacaccctgtgtgcaatttggttgct
tctttgccgttgtggttgcctaaatccttgagccctggctctgggcgggagctgcagaga
ctctcttacttgggggctttcttcagtttctcagtctttgcagaagatgatgctaaggtg
gttgagaaatatttctcagggcctgccattaccctggaaaacactcgcgtggttagccaa
tcactgcagcactacttggagctgggaaggcaagagctcttcaagattctgcatagtatt
ttgttaaatggtgaaacccgcgaggcggctctcgggtacatggcagctgtggtcaatgcc
aatatgaagaaagcgcagatgcagacagatgatagattggtatctacagatggattcatg
ctgaatttcctttgggtgctgcagcagctaagtacaaagatcaagttagagacggtggat
cccacgtatatattccacccaaggtgtcggattactcttcctaatgacgagacgagagtg
aacgcgactatggaggatgtgaacgactggctggctgaactttatggagatcagcctcca
ttttctgagccgaaattccctacggaatgcttttttcttaccctgcacgcccaccacctc
tctattctgccaagttgccgtcgctacatccgcagactccgggccatccgggagctcaat
agaaccgtggaagatttgaaaaataacgaaagccaatggaaagactccccgctggccact
agacaccgcgaaatgctgaagcgctgcaagacccagcttaagaaactggtacggtgcaag
gcctgtgctgacgctggtttacttgacgagagctttctgagaagatgtctgaatttttac
ggccttctcatccagctgctgctccgtatcctggaccccgcctatcccgacataacactg
cctttaaattcagatgtccccaaggtttttgcagcattgcctgagttttatgtagaagat
gttgctgaatttttattttttattgtacaatactctcctcaggtgctttatgagccctgt
actcaggacattgtgatgttcctcgttgtgatgttgtgtaaccagaactatatccgaaat
ccatatctggtggccaaactagtagaagtcatgtttatgaccaaccctgctgttcagcca
cgaacccagaagttttttgaaatgattgaaaaccatcctctctccaccaaattgttggtc
ccttcactgatgaagttttatacagatgtggagcataccggagccaccagcgagttctac
gacaagtttaccattcgctatcacattagcaccattttcaagagcctttggcaaaacata
gctcaccatggcaccttcatggaggaattcaattcggggaagcagtttgtgcgctacata
aacatgctgataaatgacacgacgtttttgctcgatgaaagtctggagtctctgaagcgg
atccacgaagtgcaagaagagatgaagaacaaagaccagtgggaccagctgccccgggat
cagcagcaagcccgtcagtcccagcttgctcaggacgaacgtgtttcacgctcctatctc
gccctggcaacagaaaccgtggacatgttccatatcctcaccaagcaggtccagaagcca
ttcctcagaccggagctgggaccccgactggctgcaatgctcaactttaatcttcagcaa
ctctgtggccccaagtgccgggacctgaaagtagaaaaccctgagaaatacggctttgaa
ccaaagaagctgttggaccaactgacagatatttacctgcagctggactgtgcccggttc
gccaaagccattgctgacgaccagagatcctacagcaaagagctgtttgaggaagtgatc
tcgaagatgcggaaggcagggatcaaatccacaatagcgatcgagaagtttaaactccta
gctgagaaggtggaggagatagtagccaagaacgcacgcgcagaaatcgactacagcgac
gccccagacgagttcagagaccctctgatggacaccctgatgaccgacccggtgcggctg
ccctccggcaccatcatggaccgctccatcatcctgcggcacctgctcaactcccctacg
gaccccttcaaccgccagatgctgacagagagcatgctggaaccagtgccagaactgaaa
gaacagattcacgcctggatgagagagaaacagaacagcgatcattaa
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integrated database retrieval system
