Lynx rufus (bobcat): 124514880
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Entry
124514880 CDS
T08475
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
lruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124514880
03015 mRNA surveillance pathway
124514880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124514880
03041 Spliceosome [BR:
lruf03041
]
124514880
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124514880
Spliceosome [BR:
lruf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124514880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
124514880
NCBI-ProteinID:
XP_046939181
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRGRRRRTPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPI
QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH
RKGSSPSRSTREPRSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRP
IRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAVKKPPAPQSPVQSQSPSTNW
SPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAA
AAAAVTPAAIAAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEKHLREKALRSMRKAQV
SPQS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagttactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggatatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacaaagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcggagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcggtct
ccccgccacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaaacctgaacctgtaccagagcctaaagaaccttct
ccagagaagaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctagacgg
cgtcatagatcccgatcaagatcatactccccgagaaggcggccaagcccgagaaggcgg
ccatctcctcgaagaagaactccaccaagacgaatgccacctccacccaggcatagaaga
agtagatctccagtgagacgaagaaggcgttcatcagcgtccttgtctggaagtagttcg
tcatcttcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcggaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccaacagtca
aaccgtacaagaaaaagtcgtgtttctgtttctccagggagaacttcaggtaaagtgaca
aaacacaaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgtcagtacagacgacagaaccagcagtcttcatctgattctggctcctcttct
tcctcagaagatgagcgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcgtggtagacggaggaggaccccctccccaccacccaccagaaggcgccgttct
ccttctcctgcccctcctcctcgaaggcgcaggtctcccacaccgccacctcgacgaagg
actccttctcctcccccccggcgccgctcaccttccccaagaagatactctcctccaata
cagaggagatactctccttctccgcctccaaagagaagaacggcttctccacctccccct
cctaaacgtagggcatcgccatctccaccaccaaagcgccgggtctcccattctccacct
cccaaacaaagaagctccccggtcaccaagagacgttcgccttcgttatcatcaaagcat
aggaaagggtcttccccgagccgatctacccgggagccccggtcaccacaaccaaacaaa
cggcattcgccctcaccacggcctcgagctcctcagacctcctcaagtcctccacctgtt
cgaagaggagcatcatcatcaccccaaagaaggcagtccccatctccaagtactaggccc
attaggagagtctccaggactccggaacccaaaaagacaaagaaggctgcctcaccaagc
cctcagtctgtaaggagggtttcatcctcccgatctgtctcaggatctcctgagccggca
gttaaaaaacccccagcacctcagtctcctgtccagtctcagtcaccctctaccaactgg
tcaccagcggtaccggtcaaaaaggctaaaagcccgacaccaagcccatctccggcaagg
aactcagacccagaaggaggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaa
aaggataagaagcacaagaagcacaaaaaacacaagaaggaaaaggccgtggctgcagcc
gctgcggctgctgtaacccctgcagccattgctgctcccacaaccacatcagcacaggag
gaaccagaagcggagcccgagcctaagaaggagaccgaaagcgagcccgaagacaacctc
gatgacttagaaaagcacctgcgtgaaaaggcgctgaggtcgatgcggaaggctcaagtg
tccccacagtcttag
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