Lynx rufus (bobcat): 124515142 Help Entry 124515142         CDS       T08475                                  Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism lruf  Lynx rufus (bobcat) Pathway lruf04142   Lysosome Brite KEGG Orthology (KO) [BR:lruf00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     124515142  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lruf04131]     124515142 Membrane trafficking [BR:lruf04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     124515142  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     124515142    RAVE complex     124515142 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_2nd Beta-prop_HPS5 MIOS_WD40 Beta-prop_Vps41 Motif Other DBs NCBI-GeneID:  124515142 NCBI-ProteinID:  XP_046939665 LinkDB All DBs Position Unknown AA seq 3046 aa AA seqDB search MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV GCVDCSMQQGKIAASYGNVISVFEPVNLPKQKKNLELYSQWQKSGQFFLESIAHNITWDP AGNRLLTGSSCLQLWSNANLEKPTEDENPDKTDLNLGDWRCIWHCKTASQIHLMKFSPDG EFFATAGKDDCLLKVWYNVENWRTAVTSPDKSSEKQSQGEMDFSFIYLAHPRAVNGFSWR KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCSHWTEPINLTNNFKRNA SSKERIQNASDVNLRHFRRGRRRSLALVAHTGYLPHQQDPHRVHRNAPLHANALCHFHIA ASINPATDIPLLPSITSLSLSDNNEKSGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP SSEPSVEDSNQADVKSDEEMDDGVDDLKANHEKKELGSDKMVPNSSFVPLPSAAIDHQIE VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN SLCKSIVMYACTKNVDLAIQQGKQKPSSLTRSTSMLISSGHSKSTNSLKLSIFTPNVMMI SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA LRTPDVDNQKQPHDPVNIEECSLAQQNKSSVDVTFQDPNAVYSELILWRVDPVGPLSFSG GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK KLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLQGRKTQLLHVFQEDFILN NLEKKSLGKDRILSDAGSSPNGFSEKFYLIVIECTQDNQSLLHMWNLHLKSIPVSLDEKV DTKITEAVWQPEEHYSSSPEKILSPFSQKYQACRANLQSTSKLTLSSEMVYSQELNLPEG VEIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTDGESATLKNGKMDLV YIWEEWPLLIEDGLHSNSSITVPGRPVEVSCAHTNRLAVAYKQPASNSRSSQDFLMHVSI FECESTGGSCWVLEQTIHLDELNTVLDSGISIDSNLVAYNKQEVYFSSKESITSNTKHLV HLDWMSREDGSHILTVGIGSKLFMYGPLAGKVQEQAGKESLAFPLWESTKAVPLSKFVLL RSMDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVVTESYNGSTP SIISLIKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKRTAFDPSVDTEDSGLFEAAHVLS PTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESNHERRLRSLTISAS GSTTRDPQAFNKSENTDYTEIDSVPPLPLYALLAADDDSCYASLEKSSNQSTLNNSNQLS KESYDELFQIPTLMTDNHVLETDEENTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLP GLSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPA YRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAMQKDDPTWSELRAMGVGWWVRNTRTLR KCIEKVAKAAFYRKNDPLDAAIFYLAMRKKAVIWGLYRSQKDTKMTQFFGHNFEDERWRK AALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYESEFDTSA TYKSILRKKVLGIDSPVSELNSLNISMHYDPFLRSMAYWILEDYSGALETLIKQPVQEDD DQVMMSACNPAVFNFYNYLRTHPLLLRRHFGSSDVLSTHMSLTGKSGLAGTINLSERRLF FTTASAHLKAGCPMLALEVLSKMPKVIKKTKPFCRTSSFLDTSKDYSPSSPVNLDAREDK SSAVDWSQSVMNGFGSSSEGSSEKQSNSTLSFDWSQPSVVFQDDSLELKWDSDNDEENDD LPISMKELKPLQRKTVKKVDETSSNYTDTLSTLDENDILSPSEDIIAVQLKFRACLKILT VELRTLSTGYEIDGGKLRYQLYHWLEREVIALQRTCDYCSDGEELQSALDENGDGFGLNE DSEDLLQQTKVKQLRENFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLL QESQQETSEPIFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSP PHPDIQSNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMMYQTVLLPHRHSLKT GSLDEAVTPNTAPAQWPGITSLIRLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLATH SSNELFRIVAHPLNEKMWSAVFGGGAHVPSKEQTHSKPLPVSSLVEEGEKQNKRFRPSKM SCRESAPPTSSSSPVSQDLLTVKEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESLES DDDDDDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSPL CHAVLKTLQCWEQVLLRRLEIHGGPPQNYISSHTSEESVSAGPAILRHKALLEPTNTPFR SKHHLALSVKRLWQYLVKQEEIQETFIRNIFTKKRCLNESLEDNCETIKNSMMEEPNINK IEADLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWV DDDTEMENKGSEDFLVIHARDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMIK KAINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFNYQGNK FGIVDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLSTD NRNICLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCAFDLRQRQQR QLFQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLSTFTLLHTFINEHARQSIFRNIGT GVMQIETGPANHVFSCGADGTMKMRILPDQFSPLNEVLKNDVKFML NT seq 9141 nt NT seq  +upstreamnt  +downstreamnt atgaacctgcaccaggtgctgaccggggctgtgaaccctggcgaccactgcttctccgtg ggcagcgtcggcgaccagcgcttcacggcttatgcatctggatgtgacattgttatactg ggaagtgattttgaaaggttacaaataatcccaggagctaaacatggaaatattcaagta ggatgtgtagactgctcaatgcaacaaggcaagattgcagcatcctatggaaatgttatc tctgtgtttgaaccagttaacctaccgaagcaaaagaaaaatttggaattatatagtcaa tggcagaaaagtggccaattttttctggaatcaatagcgcacaacataacttgggatcct gcaggcaatcgtcttttaactggttctagctgtttgcaactgtggtccaatgctaacttg gagaagccaactgaagatgaaaatccagataaaacagatcttaatttgggggactggaga tgcatttggcattgcaaaactgcttcccaaattcatttaatgaaattttcaccagatgga gaattttttgccactgctgggaaggatgactgtcttttaaaggtatggtataatgtagaa aactggcggacagctgttacctctccggataaaagttcagaaaaacaatcccaaggagaa atggacttttcctttatatatctggcccatcctcgagctgtaaatggattttcctggcgt aaaacaagcaaatatatgcctagggcttctgtatgtaacgtgttgttgacttgctgcaaa gataatgtatgtcgtctttgggtagagacctttttaccaaatgattgtttgctctatgga ggtgactgcagccattggaccgaaccaattaatttaacaaataacttcaaaagaaatgct tctagtaaagaacgaattcaaaatgcttcagatgtcaacctgagacattttcgcagaggt cggaggagatcacttgcccttgtagcacatactggatacctgccacatcagcaggaccct catcgtgtccacaggaatgctcccctgcacgccaatgcactttgccactttcatattgca gccagcatcaacccagccacagacattccacttcttccttctatcacatctctaagtcta agtgacaataatgagaagagtgggccttttgtggtacactggctgaacaacaaagagttg cattttactttgtccatggaagtatttttacagcaacttagaaaaagttttgaacagcca tcttctgagcccagtgtagaagactctaatcaggcagatgtaaaatctgatgaagaaatg gatgatggtgttgatgatctgaaagcaaatcatgaaaaaaaggaattgggcagtgataaa atggtaccaaattcaagttttgtaccattaccctccgctgccattgatcatcagattgaa gtacttctgtctgaatggagtaaaaatgcagacatgctattcagtattcatcccatggat ggttctttgctggtttggcatgtggattggctggacgaataccagcctggtatgtttcgt caagtccaggtgtcctttgtttccagaattcctgtagctttccccacaggtgatgcaaac tctctctgtaaaagcatagtgatgtacgcctgcaccaagaatgttgacttggctattcag caaggaaaacaaaaaccttctagtctcacgcggtccacatcaatgctaatctcctctggt cacagtaaatcaactaatagtttaaaattaagtatttttacccctaatgttatgatgatt tcaaagcatgctgatggctctctgaatcagtggctggtcagttttgctgaagaatctgct ttttctacagttctcagtatttctcataaatccagatattgtggtcatcggtttcatctt aacgatttagcttgccattcagtattaccattactgctgacgacgtcacaccataatgca ctaaggacaccggatgtcgataaccaaaagcaacctcatgatcccgtaaatattgaagaa tgttctttggcacaacagaataaaagcagcgttgatgtgacatttcaggatcccaatgca gtttatagtgagcttattctttggagggttgatcccgttgggccattgtctttttctgga ggtgtttctgaactggcccggattaattctctacatgtttctgcattttccaatgtggcg tggctgcccactcttatacccagctactgtctaggtgcatactgcaactctcctagtgca tgctttgtagcaagtgatgggcagtatctgagattatatgaagctgttattgatgccaag aaacttctgtatgagctttccaatcctgaaatttctaaatatgttggtgaagtgtttaac atagtaagtcagcagtcaactgccaggccaggatgcattatcgcattagatcccattacc aaacttcaaggcagaaaaacccagctgcttcatgtttttcaagaagatttcattttgaat aacctcgagaagaaaagtctgggaaaagacagaatattgtctgatgcaggcagctcacct aatggattttctgagaaattctacctaattgtaatagagtgcacccaagacaaccaatca ttgttacacatgtggaatttacatttaaagtctattcctgtctcattagatgaaaaagta gatacaaaaataactgaagcagtttggcaaccagaagaacattattcatcttctccagag aagatcctgtctcctttttcacagaagtatcaggcttgcagagcaaatctccagagtacc agcaagttaactctgtcttcagaaatggtttatagccaagaattgaatttgccagaagga gttgagataataagtgttaagccatcagcaggacatctgagttcttcttccatatatcct gtgtgcagtgctccttatttattggcaacttcatgctcagatgagaaagtaagattctgg agatgcagagtaacagatggagaatctgccacattgaagaatggaaaaatggatcttgta tacatttgggaagaatggccgttacttattgaggatggacttcatagcaatagtagtata accgtccctggtaggcctgtagaagttagctgtgcacatacaaatcggttagcagtagcc tataagcagcctgcatctaatagtaggtcttctcaggactttttgatgcatgtaagcatt tttgaatgtgagtctacaggaggttcctgttgggtccttgaacagacaattcatttagac gaattaaatacagtgttagattctggcattagtattgatagcaacttagtggcttacaat aagcaagaggtgtatttctccagtaaagagagtatcacatccaacacaaagcatttagtt cacttagattggatgtccagagaggatggttctcatatcctcactgtaggaattggatca aaactttttatgtatggacccctggctggcaaggtacaagaacaggctggtaaggaaagc ctcgcatttcctctctgggaaagcactaaagctgtgcctctttctaaatttgtgctatta agaagtatggatttggtttcttcagtagaaggctctccaccttttcctgtttctttgtca tgggtccgggatggcatcctggtggtaggcatggactgtgaaatgcatgtatattcccag tggcagccatcttctaaacaagaacccgttgtcacagagtcctacaatgggagcactcca tctataataagtttaataaaacagagtaactcatcaagttctggattacatcctccaaag aaaactctgactcgatccatgaccagtcttgcacagaaaatctgtggaaagagaactgcc tttgatccttctgtggacacagaagattcaggtctttttgaagcagctcatgttctttcc ccaactttacctcagtaccatcctttgcagcttttagaactcatggaccttggcaaagtt cggagagcaaaggccatcttgtcgcaccttgtcaagtgcattgctggagaggttgtggct ctgaatgaagccgaatccaaccacgagcgccgccttagatctctcaccatcagtgctagt ggaagcactaccagagatccccaggctttcaacaaaagtgaaaatacagattatacagaa atagattctgtccctccacttcctttatatgccttacttgcagcagatgatgatagctgt tatgcgtctttagagaaatctagtaatcaaagtactttaaacaactcaaaccagttgtca aaagaaagttatgatgagctttttcagatcccaactttaatgactgataatcacgtgtta gagacagatgaagaaaacacaaagcccagggttatcgacctttcacaatacagtccaact tactttggtcctgagcacgctcaggttctctctggccacttacttcattctagtttacca ggactcagccggatggagcagatgtctttgatggccttagcagacacaatcgcaactacc agcactgatatcggagaaagcagagacagaagccaaggtggagaaactctcgatgaatgt gggttaaaatttcttttagctgttcgacttcatacgttccttacaacttcccttccagct taccgagctcagctccttcaccaaggcctgtctactagtcattttgcctgggcttttcac tcggtagcagaggaggaactgctgagcatgctgccggccatgcagaaagatgatcccacc tggtcggaactgagagccatgggcgtggggtggtgggtccggaacacccgcaccttacgc aagtgcatagaaaaggtagctaaagcagccttttatagaaagaatgatcctttagatgct gccattttttaccttgcaatgagaaagaaagctgtgatttggggcttatatagatcccaa aaagacaccaagatgacacagttttttggacacaattttgaggatgagagatggcgtaaa gcagctttaaagaatgccttttctttgttaggcaaacaaagatttgaacattctgcagca ttttttcttttagctggttgcctcagagatgcaattgaggtatgtcttgagaaactgaat gacattcagttggctcttgtaatagcaagactctatgagtctgaatttgatacatctgca acatataaatctattttacgtaaaaaagttttgggaattgattctcctgtcagtgaactc aattcattgaacataagtatgcattatgatccttttcttcggagtatggcatattggatt ttggaagattatagtggtgctctggaaacattaataaagcaaccagtccaagaggatgat gatcaagtcatgatgtcagcctgtaatcctgcagtttttaatttctacaattatctaaga acgcatcctctattgctgagacgtcattttggatcatctgatgtattgtctacacacatg agtttaacgggaaaaagtggactggcaggaacaatcaatttaagtgaaagaagattattt tttactactgccagtgctcatttaaaagctggctgtcctatgttagctttggaagtatta tcaaagatgccaaaagtcatcaagaaaacaaaacctttttgtagaacatcgagttttctg gatactagtaaagactattctccttcttctccagtgaacttggatgcaagggaagataag tcttctgctgttgattggtcacagtcagtgatgaatggttttggatcttcttcagagggt tcctcagagaagcagtcaaactccactctttcttttgactggagccaaccaagcgttgta tttcaggacgactctttagaattaaaatgggacagtgataacgatgaagaaaatgacgat ctccctatctcaatgaaagaactgaaacctttacagagaaaaacggtgaaaaaagtagat gaaacaagttctaattatacagacactctcagcacactagatgaaaatgatattttgagt ccatcagaagacataattgcagttcagttaaaatttagagcatgtttaaagattctcacc gtagaacttcgtactttatctactggctatgaaatagatggtggaaaattgcgttaccaa ctctaccactggcttgaaagagaggtaatagctcttcagaggacctgtgactattgttca gatggagaagaattacagtctgccctggacgaaaacggagatggatttggattaaatgaa gattctgaagatttgcttcagcaaacaaaagtgaaacaactgagagaaaattttcaggaa aaaagacagtggcttttgaaatatcagtcactcttgaggatgtttctgagttactgcata cttcatgggtcccacggagggggtcttgcatctgtgagaatggagttgattttgctttta caagaatctcagcaggaaacatcagaacccatatttcctagccctctgtcagagcaaacc tcggtacccctcctctttgcttgtactgccagtgccaaaacagtagttgccaatccatta ctgcaccttagtaacctcacacatgatattctgcatgccataataaactttgattcacca ccccatcctgacatccagagcaataaggtatatgtaatgcatactttagcagcctcactt tctgcttgtatttatcagtgcctttgtggtagtcataactacagttcatttcaaacaaat cagtttactggaatgatgtatcagacagtattacttccccatcgacattctttgaaaaca ggaagcttagacgaagcagtaactcctaatacagcaccagcacaatggccaggcataact tccctgattcgacttttgaattcttctggcgaggaagcccagtcagggcttacagtttta ctctgtgagattctcacagcagtgtatcttagtctcttcatccatggcctggcgacacat tctagtaatgaactatttcggattgtggcccatcctctaaatgaaaaaatgtggtctgct gtgtttggtggaggtgctcatgttcccagcaaagaacagacacactcaaaacctttacct gtttcttcacttgtggaagaaggagagaaacagaacaaacgttttaggccatcaaaaatg tcttgcagagaatctgccccaccaacctcttcctcgtcaccagtcagccaggacttactg acagtcaaagagaagttcatcccgccagagctcagtatctgggactatttcatagccaag ccttttctccctccttcccaaagtagagcagagtatgattcagaagagagtctggagagt gatgatgatgatgatgatgttttagcttctgatttccatctgcaagagcattctaattca aattcatatagttggtcattgatgcgcttggcaatggtgcagttggtactcaacaatttg aagactttctatccctttgcaggtcacgatcttgcagaacttccagttagttcaccactt tgtcatgcggttctgaaaactcttcagtgttgggaacaagttcttctccgacgacttgaa atccatggtgggccacctcaaaactatatctcaagtcatacctctgaagagagtgtgtct gcaggccctgcaattctccgccataaagctttgctggaacctacaaacactcctttcaga tccaaacaccatctggcactgtctgtgaagagactttggcagtatttggtgaagcaggaa gaaattcaggaaacttttatcagaaatatattcacgaagaaaagatgtctaaatgagtca ttagaggacaactgtgaaaccatcaaaaattctatgatggaggagccaaacatcaataag atagaagcagacttgggatatcctggaggtaaagcaaggattattcacaaggaatctgat atcattactgcctttgctgttaataaagcaaatagaaactgcatagcaattgcttcaagc catgatgttcaagagctggatgtttctggaattctggctacacagatctatacttgggta gatgatgatactgaaatggaaaacaaaggatcagaagatttcttggttatacatgctcgg gatgatttaacagctgtgcaaggtacaaccccatatacacacagcaatcccggcactccg atcaatatgccatggcttggaagtacacagaccggcagaggagcctctgtgatgattaag aaagccattaataatgtcagaagaatgacttctcatccaactcttccgtactatctgaca ggagctcaagatggaagtgtcagaatgtttgaatggggccattctcaacaaataacctgt tttcgatctggtggcaattcaagagttacaagaatgagatttaactatcaaggaaacaag tttggaatagttgatgctgatggatatttaagcctgtatcagacaaactggaaatgttgt ccagtaactggaagcatgcctaagccatacctgacctggcagtgtcataacaaaacagcc aatgattttgtcttcgttagttcctcctctttgatagctacagctggtctttcaactgac aatagaaatatatgtttgtgggatactcttgtggcacctgccaatagtttagtccatgct tttacttgccatgatagtggagctactgttttagcatatgctccaaaacaccagctacta atatcaggtggcagaaaaggctttacatgtgcatttgaccttcggcaacgacagcagagg cagcttttccagagccatgattctcctgttaaagccattgccattgatccaacagaagag tactttgttacaggatctgctgaaggcaacataaagatttggagtctgtctacctttact cttctccacacttttatcaatgaacatgctcggcagtccattttccggaacattggaact ggagtgatgcagattgagacagggccagcaaaccacgtgttctcgtgtggagccgatggt acaatgaagatgaggatactgccggatcagtttagcccactaaatgaagtgttgaaaaat gatgtgaaatttatgctctga

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