Lynx rufus (bobcat): 124515281 Help Entry 124515281         CDS       T08475                                  Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism lruf  Lynx rufus (bobcat) Pathway lruf04611   Platelet activation lruf04820   Cytoskeleton in muscle cells lruf04926   Relaxin signaling pathway lruf04933   AGE-RAGE signaling pathway in diabetic complications lruf04974   Protein digestion and absorption lruf05146   Amoebiasis lruf05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:lruf00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     124515281  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     124515281   09152 Endocrine system    04926 Relaxin signaling pathway     124515281   09154 Digestive system    04974 Protein digestion and absorption     124515281  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     124515281   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     124515281   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     124515281  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lruf00536]     124515281 Glycosaminoglycan binding proteins [BR:lruf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124515281 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  124515281 NCBI-ProteinID:  XP_046940002 LinkDB All DBs Position Unknown AA seq 1466 aa AA seqDB search MTSFVQKGTWLLLALLHPTVILAQQEAVDGGCSHLGQSYADRDVWKPEPCQICVCDSGSV LCDDIICDEQELDCPNPEIPFGECCAVCPQPPTAPPRPPNGHGPQGPKGDPGPPGIPGRN GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQFESYDVKSGVVGAGLAGYPGPAGPPG PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPG ERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMG PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG SSGSPGQRGEPGPQGHAGAPGPPGPPGTNGSPGGKGEMGPAGIPGAPGLIGARGPPGPSG TNGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPG AAGERGAPGFRGPAGANGLPGEKGPAGERGGPGPAGPRGAPGEPGRDGVPGGPGIRGMPG SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG GPGPQGPAGKNGETGPQGPPGPTGPAGDKGDVGPPGPQGLQGLPGTSGPPGENGKPGEPG PKGEAGSPGTPGGKGDSGAPGERGPPGALGPAGPRGGAGPPGPEGGKGPAGPPGPPGAAG TPGLQGMPGERGGPGGPGPKGDKGEPGSSGTDGAPGKDGPRGPTGPIGPPGPAGQPGDKG EGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGNNGNPGPPGSSGAPG KDGPPGPPGSSGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAG PPGIPGPRGSPGPQGVKGESGKPGSPGHNGERGAPGPQGLPGLAGAAGEPGRDGNPGSDG LPGRDGAPGGKGDRGENGSPGPPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPAG SRGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGAPGAPGPAGHQGAVGSPGPAGPRG PVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGAG GGVAFAGIGGEKAGGFAPYYGDEPMDFKINTEEIMTSLKSVNGQIESLISPDGSRKHPAR NCRDLKFCHPELQSGEYWIDPNQGCKLDAIKVFCNMETGETCINASPVNVPRKNWWIDSG AEKKHVWFGETMDGGFQFSYGNPDLPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD QASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYRTRKAVRLP IVDIAPYDVGGPDQEFGVDIGPVCFL NT seq 4401 nt NT seq  +upstreamnt  +downstreamnt atgacgagctttgtgcaaaaggggacctggttacttcttgctctgcttcatcccactgtt attttggcacaacaggaagctgttgatggaggatgctcccatcttggtcagtcctatgcg gatagagatgtctggaagccagaaccttgccaaatatgcgtctgtgactcaggatctgtt ctctgcgatgacataatatgtgacgaacaagaattagactgtcccaacccagagatccct tttggagaatgttgtgcagtttgcccacagcctccaacagctcctcctcgccctcctaat ggtcatggacctcaaggccctaagggagatccaggccctcctggtattcctgggagaaat ggtgatcctggtattccaggacagccaggttcccctggttctcctggcccccctggaatc tgtgaatcatgccctactggtcctcagaactattctccccagtttgaatcatacgatgtc aagtctggagtagtaggagcaggacttgcaggctaccccgggccagctggtccccctggc cctcctggtccccctgggacatctggtcatcctgggtctccaggttctccaggataccaa ggtccccctggtgaacctgggcaagctggtcctgcaggccccccaggaccccctggtgct ataggcccatctggtcctgctggaaaagatggggaatcaggaagacctgggcgacctgga gagcgagggttgcccggacctccaggtatgaagggtccagctggcatgcctggattccct ggtatgaaaggacatagaggctttgatggacgaaatggagaaaagggtgaaacaggtgct cctggattaaagggggaaaatggcctgcctggtgaaaacggagctcctggacccatgggt ccaagaggagctcctggtgaaagaggacggccaggacttcccggagccgcaggggctcga ggtaatgatggtgctcgcggaagtgatggacaaccaggtccccctggtccccctggaact gcaggattccctggttcccctggtgctaagggtgaagttggacctgcaggatctcctggt tcaagtggctcccctggacaaagaggagaaccaggacctcagggacacgctggtgctcca ggtcctcctggccctcctgggaccaatggtagtcctggtggtaaaggcgaaatgggtcct gctggcatccctggagctcctggactgataggagcccggggtcctcctggaccatctgga accaatggtgctcctggacagcgaggtgctgcaggtgaacctggtaaaaacggtgccaaa ggagagccagggccacgtggtgaacgtggtgaagctggttctccaggtatcccagggcct aaaggtgaagacggcaaagatggttcgcctggagaacctggtgcaaatggacttccggga gctgcaggagaaaggggtgctcctgggttccgaggacctgctggagcgaacggccttcca ggagaaaagggccccgctggggagcgtggtggtccaggccctgcagggcccagaggagct cctggagaacctggccgagatggtgtccctggaggtccaggaataaggggcatgcctgga agcccaggaggaccaggcagtgatgggaaaccaggacctcccggaagtcaaggagaaagt ggccgaccaggtcctccaggcccatctggtccccgaggtcagcctggcgtcatgggtttc cctggtcctaaaggaaatgatggtgcaccaggcaagaatggagaacgaggtggtcctgga ggtcctggccctcagggtcctgctgggaaaaatggtgaaactggacctcagggcccccca ggacctaccgggccagctggtgacaaaggagatgtaggaccccctggtccacaaggatta caaggcttaccaggaaccagtggacctccaggagaaaatggaaaacctggagaaccaggt ccaaagggtgaagctggttcacctggaactccaggaggcaagggtgattccggtgccccc ggtgaacgtgggccccctggagccttggggcccgctggaccgagaggtggagctggcccc cctggtcccgaaggaggaaaggggcctgctggtccccctgggccacctggcgctgctggg actcctggtctgcaagggatgcctggagaaagaggaggtcctggaggccctggtcccaag ggtgacaagggtgaaccaggcagttcaggtactgatggtgctccagggaaagatggtcca aggggtcctactggtcccattggtcctcctggcccagctggccagcctggagataagggt gaaggtggtgcccctgggcttccgggtatagctggtcctcgtggtggccccggtgagaga ggtgaacatgggcctccaggacctgctggcttccctggtgctcctggacagaatggtgag cccggtgctaaaggagaaagaggtgctcctggtgagaaaggtgaaggaggcccccctgga gtcgcagggccccccggaggttctgggcccgctggtccccctggtccccagggtgtcaaa ggtgaacgtggcagtcctggtggtcccggtgctgctggcttccccggtggtcgtggtcct cctggtcctcctggtaataatgggaacccaggccccccaggctccagtggtgctccaggc aaggatgggccccctggtccacctggtagcagtggtgctcctggaagccctggagtgtct ggacccaaaggtgatgctggccagcctggtgagaagggatctcccggcgcccagggcccc ccgggagctccaggcccacttggcattgccgggattacgggagcgaggggtcttgcagga ccaccaggcataccaggtcccaggggaagcccaggcccgcagggcgtcaagggtgaaagt gggaaaccagggtctcctgggcacaatggagaacgtggtgctcctggaccccaaggtctt cctggtctggctggtgcagctggtgaacctggaagggatggaaacccaggatcagatggt ctgccaggccgagatggagctcctggtggcaagggtgaccgtggagaaaacggctctcct ggtcctcctggtgctcctggtcatccaggcccacctggccccgtcggtccggctggaaag aatggtgacagaggagaaaccggccctgctggtccttctggggctccaggtcctgctggc tcccgaggtgctcctggtccccaaggcccacgtggtgacaaaggtgaaacaggtgaacgt ggttctaatggcatcaaaggacatcgaggattccctggtaatccaggagccccaggtgct ccaggtcctgctggtcaccaaggtgcagttggtagtccaggacccgcaggccccagagga cctgttggacccagtgggccccccggcaaagatggaacaagtggacatccaggtcccatt ggacccccggggcctcgaggtaacagaggtgaaagaggatctgaggggtccccaggtcac ccaggacaaccgggtcctcctggacctcctggtgcccctggtccatgctgtggtgctggt gggggtgttgccttcgctggtattggaggtgaaaaagctggcggatttgccccatattat ggagatgaaccaatggatttcaaaatcaacaccgaggagattatgacctcactcaaatca gtcaatggacagatagagagcctcattagtcctgatgggtcccgtaaacaccctgctcgg aactgccgagacctgaagttctgccatcctgaactccagagtggagaatattggattgat cctaaccaaggctgcaagttggatgctattaaagtattctgtaatatggaaactggggaa acatgcataaatgccagtcctgtgaatgttccacgtaagaactggtggatagattctggt gctgagaagaaacatgtttggtttggagaaaccatggatggtggttttcagtttagctat ggcaatcctgaccttcctgaagatgtcctcgatgtccagctggcattcctccgacttctc tccagccgggcctcccaaaacatcacgtatcactgcaagaatagcattgcatacatggat caggccagtgggaatgtaaagaaagccctgaggctgatgggttcaaatgaaggtgaattc aaggctgaagggaatagcaaattcacatacacagttctggaggatggttgcactaaacac actggggaatggggcaaaacagtcttcgaatatcgaacacgcaaggccgtgagattacct attgtagatattgcaccctatgatgttggtggtcctgatcaagaatttggtgtggacatt ggccccgtttgctttttataa

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