Lynx rufus (bobcat): 124515797
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Entry
124515797 CDS
T08475
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124515797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124515797
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124515797
Spliceosome [BR:
lruf03041
]
Complex A
U2 snRNP components
U2 related factors
124515797
Complex B
124515797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
124515797
NCBI-ProteinID:
XP_046940776
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR
SRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRSK
EKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKK
FNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGIT
VKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIE
EEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI
INDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYT
FITEDQARYAGDIIKALELSGTAVPSDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFD
ETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAP
TAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQLA
EKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISEY
SEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQ
PTNKGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccattatcggaagcggtcagcatcaagggggcgctctggaagt
cgatctagaagtcgctcacctgacaaaagaagtaaacgtggagatgacaggaggtctaga
agcagagatagagatagaaggagagagaggtctcgtagcagggataaaagaagatctcgg
tcaagagaccggaagcgcctgaggcgttccagaagtagagagagagatcgaagtcgagag
cgaagaagatctcgaagtcgagacaggagacgctccaggagtagaagccgaggccggcga
tccagatcctcaagtcctggcaataaaagcaagaaagctgagaataggtctaggtccaaa
gagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaggag
gatgaaaaagaaaaagatgctggtaactttgatcagaataagctggaagaagaaatgagg
aagcgaaaagaacgagtagaaaaatggcgagaggagcaacgtaaaaaggccatggaaaac
ataggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagtttagaa
gatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatggag
ggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaaaag
tttaatatgcgaagtgtgaagggtggtggagggaatgaaaagaagtctgggccaacagtc
acaaaagttgtcactgtagtgacaaccaaaaaagcagtggtagattctgataagaagaaa
ggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaagtt
gatcttcagacggcccttacaggctaccagacaaaacagagaaagcttctagaaccagtg
gatcatggaaaaattgaatatgaaccgttcagaaaaaacttttatgttgaagttccagaa
ttagcaaaaatgtctcaagaggaggtaaatgtttttcggttggaaatggaaggcattact
gtcaagggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttctatg
aagatcctaaattctctcaaaaagcatggctatgaaaaacccacgccaatccagacccag
gcgattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagcgga
aagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcattagaa
gaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaaatt
actaaagaatgtaagaagttttcaaagaccctgggacttagagtggtctgtgtttatgga
ggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtttgc
acacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatcttcga
agagtaacatatgttgttttagacgaagcagacagaatgtttgacatgggttttgaacca
caggtcatgcgcattgtggataatgtccgtcccgatcgacagacagttatgttttcagct
actttccccagagctatggaggctttggctcgcagaatcctcagtaaacccattgaagtg
caggttggaggcagaagcgtggtttgctcagatgtggaacaacaagtgattgtgattgaa
gaagaaaagaagttcttgaagttattggagcttctcggccattatcaagaatcgggatct
gtcattatatttgtggataagcaggaacatgcagatggtcttctgaaagatttaatgaga
gcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagcatc
ataaatgacttcaagaatgggacctgcaaacttctcgtagccacttctgttgctgcccga
ggtttagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccattatgag
gattatgtgcacagagcgggaaggactggaagagcaggcaataaaggttatgcgtatact
tttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattgtca
ggaactgcggtgccttctgatctggagaaactttggagtgatttcaaagatcagcagaaa
gctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagtttgat
gaaacagaacaagctttggccaatgagaggaagaagttgcaaaaagcagctctcggtttg
caagattcagatgatgaggacgctgcagtcgatattgatgaacaaattgaaagtatgttt
aattcaaagaagagagtaaaagatatggctgctcctggaacatctagtgttcctgctcca
actgcgggaaatgctgagaaattagaaatagctaagagactggctcttagaatcaatgct
cagaagaatttgggcattgagtctcaggatgtgatgcaacaggccaccaatgcaattctc
agaggtggcaccatcctggctcccactgtgtctgcaaaaaccattgcagaacaacttgct
gaaaagatcaatgctaagctcaattatgtgcctttggagaaacaagaagaggagaggcaa
gatggtggacagaatgaatcttttaaaagatatgaagaagaattagagatcaatgacttc
ccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagtgaatat
tctgaagccgcaattacaatcagaggaacatatttcccacctggcaaagaacctaaggaa
ggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaagca
aaggcagaaatcaccagacttataaaagaagaactgatccggctgcaaaattcataccaa
ccaacaaataaaggaagatacaaagtcttataa
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integrated database retrieval system
