Lynx rufus (bobcat): 124515823
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Entry
124515823 CDS
T08475
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf05014
Amyotrophic lateral sclerosis
lruf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124515823
05022 Pathways of neurodegeneration - multiple diseases
124515823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124515823
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124515823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
MORN
RCC1_2
VPS9
PH_alsin
Alsin_RLD
RhoGEF
DH_ALS2
HA_Alsin
PH
CSDE1
CCDC47
Motif
Other DBs
NCBI-GeneID:
124515823
NCBI-ProteinID:
XP_046940817
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MDSKKRSSVEAEGSKERGLVHVWQAGSCSLAPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEICPSSPILENALVGQYVVTVASGSFHNGAVTESGVVYMWGENSA
GQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQVENQASTAISPSTETLDNQGEVFENTLVENNVP
VATDATRGDAISFQQDTMGTTEISSARNTPSYPDTQAVNEYVQTLSDRSVRENSENGEKP
MPSQPLVEEAVPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYST
APCEPGTQAGSSSIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLPGL
LSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR
LQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFPTTVPRLAKVN
SENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDPTEVDNLPENHSGTKTPVLLSCSKL
GYISRVTAGKDSYLALVDKNVMGYIASLHELATTERRFYSKLSDIKSHILRPLLSLDNLG
TASTVQLLQEVASRFSKLCYLIGQHGASLSSFLHGIKEARSLVILKHASLFLDSYTEYCT
SITNFLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLPIRRLHNY
AKVLLKLATCFEVTSPEYQKLQDSSSCYESLALHLGRKRKEAEYTLGFWKTFPGKMTDSL
RKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWAEPLSEE
AGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDLPPYGSGSSIQRQE
PPISRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGLEDGYGEY
RIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSS
PSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGNFHLNKM
MGNGVLLSEDDTIYEGEFSDDWTLNGKGTLTMPNGDYIEGYFSGEWGSGIKITGTYFKPS
LYESDKDRPKVFRKLGNLAVSADEKWKAVFDECWRQLGCDNPGQGEVWKAWDNIAVALTT
NRRQHRDSPETLSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPLHPLGRLV
ETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTIPLSAPLP
TERKSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDREEDIYWEC
VLRLNKQPDIALLGFLGVQRKFWPMTLSILGESKKVLPTTKDACFASAVECLQQISTTFT
PSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIEDL
MDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagagaagctcagtagaggcagaaggatccaaagaaagaggcctggtc
catgtctggcaggcaggatcctgttctttagcaccagagagattgccaggctggggagga
aagactgttcttcaagcagccctgggagtgaaacatggagttcttctgactgaagatggt
gaggtctacagctttgggactcttccctggagaagtgaaccagcagagatttgtccgagt
agccccattctagaaaatgccctggtcgggcaatatgttgttactgtggcatcagggagt
ttccacaatggagcagtgacagaaagtggcgtagtgtacatgtggggggagaactctgca
ggccagtgtgcagtggctaaccagcagtatgttccagaaccaaatcctgtcagcatttct
gattctgagaccagttctttgctagcagtcaggattttgcagctggcatgtggtgaggag
cacactctggcattgtcaataagcagagagatttgggcatggggtaccggttgtcagttg
ggtctcattaccaccaccttcccagtgacaaagccacaaaaggtggaacatcttgccggg
cgagtggtgctacaagttgcctgtggtgcgttccacagcttagcacttgtacagtgcctc
ccttcccaggatctaaagccagtcccagaaagatgcaaccagtgcagccaactcttaatt
actatgactgacaaagaagaccatgtgattatatcagatagtcattgttgcccattaggt
gtgacgctgtcagaatcccaggtagaaaaccaggccagcactgccataagcccctccact
gaaaccctggacaaccagggagaagtatttgagaatacgcttgtagaaaataatgtgcct
gttgctactgacgccacgagaggtgatgccatttccttccaacaagacaccatgggaaca
actgaaatttcttctgccagaaatacaccatcgtaccctgatactcaagcagtaaatgaa
tacgtgcaaacactgtcagatcgttcagtaagagagaactcagagaacggcgaaaagcca
atgccatctcagcctcttgtagaagaagcagttcctaatcttcacagcccaccaaccaca
agcacctcagccctaaacagcctagtagtctcttgtgcatctgctgttggtgtgagagtg
gctgctacatatgaagccggggccttgtcccttaagaaagttatgaacttctatagcaca
gccccttgtgaacctggaactcaggcaggcagtagttccataggcccggaaggtctgaaa
gatagcagagaagaacaggttaagcaggaatcaatgcaaggaaagaaaagttcaagtctt
gtggatatcagagaagaagaatcagagggaggcagccgaagactctccctccctgggttg
ttgtcccaagtttcccccaggctcttaagaaaagctgcacgggtaaaaactcggacagtg
gttctgacccctacgtacagtggagaagcagatgcactcctgccttctctgagaacggag
gtgtggacctgggggaaagggaaggaaggacagctggggcacggtgatgttctgcctagg
cttcaaccactatgtgtaaaatgtctcgatgggaaagaagtaatctatctggaggcaggg
ggttaccattctcttgcacttactgcgaaatcccaggtttactcatggggtagcaatacc
tttggtcaacttgggcattatgattttccaacaacagttcctcgtcttgcaaaggtgaac
agtgaaaatggagtctggagtgtagctgcaggccaggattattccctgtttttagtggat
acagaagacttccaacctgggttatattatagtggccgacaggaccctacagaagttgac
aaccttccagagaatcacagtggtactaagactccagtacttctctcctgtagtaagctc
ggatatataagcagagtgacagcaggaaaagatagctatctagctttggtggacaaaaat
gttatgggatatattgccagtctccatgagttggctactacagaaagacggttctattca
aaactaagtgacatcaaatctcacatcctcaggcctcttcttagtttagacaatttgggc
actgcaagtacagtccagctgttgcaggaggtggcgagccggttcagcaagctgtgttac
ctaattggtcagcatggagcctcactgagcagcttccttcatgggataaaggaagccagg
agtttggtcattctgaagcatgcaagtctcttcttggatagttatacagagtattgcaca
tctattacaaatttcctggttatgggaggattccagcttcttgctaagcctgccattgat
ttcctaaataaaaaccaggagctgttacaagatttatcagaagtaaatgacgaaaacact
caattgatggaaatactgaatactctgtttttcctgccaatcagacgacttcataattat
gcaaaagttttgctaaagcttgctacttgttttgaagtgacatctccagaataccagaaa
ctgcaggattccagttcttgttatgagtctcttgctctccatctcggcaggaaaaggaag
gaagctgaatacacactgggcttctggaagacctttcctggaaaaatgacggattccttg
aggaagccagagcgtcgactgctgtgtgagagcagtaaccgagccctatctctgcagcat
gctgggaggttttctgtgaattggttcattctctttaatgatgccctagtccatgctcag
ttctccacacatcatgttttccctttggccacattatgggcagagccactttctgaagaa
gctggtggtgtgaatggcttaaagataactacacctgaggagcagttcactctcatttca
tcaacaccccaggaaaagactaagtggctacgggctataagccaagctgtggatcaggct
ttgagggggacatctgaccttccaccttatggaagtggcagtagtattcagaggcaggaa
ccacccatttcacgcagtgccaaatatactttctataaggatcctcgcctaaaggatgca
acctatgatggacgctggctttcagggaagccccatggcagaggggttttgaagtggcca
gatggaaagatgtattctggcatgttcaggaatggcttggaagatggatatggagaatat
agaatcccaaacaaagcactgaacaaagaagaccattatgtgggccattggaaagaagga
aaaatgtgtggtcaaggagtctatagttatgcctctggtgaagtgtttgaaggctgtttt
caagataacatgcgtcatggtcatggtctcctacggagtggaaaattgacttcctcttct
cccagtatgttcattggccaatgggtaatggataagaaagcaggatatggtgtctttgat
gatatcactaggggggaaaagtatatgggaatgtggcaagatgacgtatgtcaagggaat
ggtgtggtagttacccagtttggattatactatgaaggcaactttcaccttaataaaatg
atgggaaatggggttttactttccgaagatgatactatatatgagggagaattttcagat
gactggactcttaatggaaagggaacgctgactatgccaaatggagattacattgaaggt
tattttagtggagaatggggatctgggataaaaatcaccggaacttacttcaagcctagt
ctgtatgagagtgataaagacagacccaaagttttcaggaagctaggaaacctggcagtg
tcagctgatgagaaatggaaagcagtctttgatgaatgttggcgtcagctgggctgtgat
aacccaggccaaggggaagtttggaaagcatgggacaatattgctgtggccctgactacc
aatcggcgccaacacagagacagtccagagacattaagtcgttcacagactcaaacacta
gagagtttggaattcattcctcagcatgttggtgccttctctgtggagaaatatgatgac
atcaagaaatatttaataaaggcctgtgacactcctctgcaccccctgggcaggcttgtg
gagacactggttgcagtttatagaatgacatatgtgggtgtgggagccaatcgccggtta
ttgcaggaggctgtgaaggagattaagtcctaccttaagcgaattttccagctggtgaga
ttcttatttcctgagcttcctgaagagggcagcacaattcctctctctgctcctctgcca
accgaaaggaaatccttttgcactgggaaatcagattccagatctgaatctccagagcct
ggttatgtggtaacaagttctgggttactgcttcctgtactactacctcggctctaccca
ccactgtttatgctctatgccctggataatgatcgtgaggaagacatttactgggaatgt
gtactacgactaaataaacagccagatattgctcttctgggcttccttggggtgcagagg
aaattttggccaatgaccttgtcaatccttggagagagtaaaaaggttttgccaaccaca
aaagatgcttgttttgcctcagctgtagaatgtctacagcagattagcacgacatttacc
ccgtcagacaaacttaaggtcatccagcagacttttgaagagatctctcagagtgtcctg
gcatcacttcaggaagactttttatggtccatggatgacttgtttcctgttttcttatat
gtggtgctacgggccaggattaggaatttaggctccgaggtacacctcattgaggatctg
atggacccgtatcttcagcatggggaacagggtataatgttcaccaccttgaaggcgtgt
tactaccagatccagcgtgagaagcttaactag
DBGET
integrated database retrieval system