KEGG   Lynx rufus (bobcat): 124515823
Entry
124515823         CDS       T08475                                 
Name
(RefSeq) alsin
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf05014  Amyotrophic lateral sclerosis
lruf05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    124515823
   05022 Pathways of neurodegeneration - multiple diseases
    124515823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lruf03036]
    124515823
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    124515823
SSDB
Motif
Pfam: DH_Alsin WD40_RLD RCC1 MORN RCC1_2 VPS9 PH_alsin Alsin_RLD RhoGEF DH_ALS2 HA_Alsin PH CSDE1 CCDC47
Other DBs
NCBI-GeneID: 124515823
NCBI-ProteinID: XP_046940817
LinkDB
Position
Unknown
AA seq 1650 aa
MDSKKRSSVEAEGSKERGLVHVWQAGSCSLAPERLPGWGGKTVLQAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEICPSSPILENALVGQYVVTVASGSFHNGAVTESGVVYMWGENSA
GQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQVENQASTAISPSTETLDNQGEVFENTLVENNVP
VATDATRGDAISFQQDTMGTTEISSARNTPSYPDTQAVNEYVQTLSDRSVRENSENGEKP
MPSQPLVEEAVPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYST
APCEPGTQAGSSSIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLPGL
LSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR
LQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFPTTVPRLAKVN
SENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDPTEVDNLPENHSGTKTPVLLSCSKL
GYISRVTAGKDSYLALVDKNVMGYIASLHELATTERRFYSKLSDIKSHILRPLLSLDNLG
TASTVQLLQEVASRFSKLCYLIGQHGASLSSFLHGIKEARSLVILKHASLFLDSYTEYCT
SITNFLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLPIRRLHNY
AKVLLKLATCFEVTSPEYQKLQDSSSCYESLALHLGRKRKEAEYTLGFWKTFPGKMTDSL
RKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWAEPLSEE
AGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDLPPYGSGSSIQRQE
PPISRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGLEDGYGEY
RIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSS
PSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGNFHLNKM
MGNGVLLSEDDTIYEGEFSDDWTLNGKGTLTMPNGDYIEGYFSGEWGSGIKITGTYFKPS
LYESDKDRPKVFRKLGNLAVSADEKWKAVFDECWRQLGCDNPGQGEVWKAWDNIAVALTT
NRRQHRDSPETLSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPLHPLGRLV
ETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTIPLSAPLP
TERKSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDREEDIYWEC
VLRLNKQPDIALLGFLGVQRKFWPMTLSILGESKKVLPTTKDACFASAVECLQQISTTFT
PSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIEDL
MDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq 4953 nt   +upstreamnt  +downstreamnt
atggactcaaagaagagaagctcagtagaggcagaaggatccaaagaaagaggcctggtc
catgtctggcaggcaggatcctgttctttagcaccagagagattgccaggctggggagga
aagactgttcttcaagcagccctgggagtgaaacatggagttcttctgactgaagatggt
gaggtctacagctttgggactcttccctggagaagtgaaccagcagagatttgtccgagt
agccccattctagaaaatgccctggtcgggcaatatgttgttactgtggcatcagggagt
ttccacaatggagcagtgacagaaagtggcgtagtgtacatgtggggggagaactctgca
ggccagtgtgcagtggctaaccagcagtatgttccagaaccaaatcctgtcagcatttct
gattctgagaccagttctttgctagcagtcaggattttgcagctggcatgtggtgaggag
cacactctggcattgtcaataagcagagagatttgggcatggggtaccggttgtcagttg
ggtctcattaccaccaccttcccagtgacaaagccacaaaaggtggaacatcttgccggg
cgagtggtgctacaagttgcctgtggtgcgttccacagcttagcacttgtacagtgcctc
ccttcccaggatctaaagccagtcccagaaagatgcaaccagtgcagccaactcttaatt
actatgactgacaaagaagaccatgtgattatatcagatagtcattgttgcccattaggt
gtgacgctgtcagaatcccaggtagaaaaccaggccagcactgccataagcccctccact
gaaaccctggacaaccagggagaagtatttgagaatacgcttgtagaaaataatgtgcct
gttgctactgacgccacgagaggtgatgccatttccttccaacaagacaccatgggaaca
actgaaatttcttctgccagaaatacaccatcgtaccctgatactcaagcagtaaatgaa
tacgtgcaaacactgtcagatcgttcagtaagagagaactcagagaacggcgaaaagcca
atgccatctcagcctcttgtagaagaagcagttcctaatcttcacagcccaccaaccaca
agcacctcagccctaaacagcctagtagtctcttgtgcatctgctgttggtgtgagagtg
gctgctacatatgaagccggggccttgtcccttaagaaagttatgaacttctatagcaca
gccccttgtgaacctggaactcaggcaggcagtagttccataggcccggaaggtctgaaa
gatagcagagaagaacaggttaagcaggaatcaatgcaaggaaagaaaagttcaagtctt
gtggatatcagagaagaagaatcagagggaggcagccgaagactctccctccctgggttg
ttgtcccaagtttcccccaggctcttaagaaaagctgcacgggtaaaaactcggacagtg
gttctgacccctacgtacagtggagaagcagatgcactcctgccttctctgagaacggag
gtgtggacctgggggaaagggaaggaaggacagctggggcacggtgatgttctgcctagg
cttcaaccactatgtgtaaaatgtctcgatgggaaagaagtaatctatctggaggcaggg
ggttaccattctcttgcacttactgcgaaatcccaggtttactcatggggtagcaatacc
tttggtcaacttgggcattatgattttccaacaacagttcctcgtcttgcaaaggtgaac
agtgaaaatggagtctggagtgtagctgcaggccaggattattccctgtttttagtggat
acagaagacttccaacctgggttatattatagtggccgacaggaccctacagaagttgac
aaccttccagagaatcacagtggtactaagactccagtacttctctcctgtagtaagctc
ggatatataagcagagtgacagcaggaaaagatagctatctagctttggtggacaaaaat
gttatgggatatattgccagtctccatgagttggctactacagaaagacggttctattca
aaactaagtgacatcaaatctcacatcctcaggcctcttcttagtttagacaatttgggc
actgcaagtacagtccagctgttgcaggaggtggcgagccggttcagcaagctgtgttac
ctaattggtcagcatggagcctcactgagcagcttccttcatgggataaaggaagccagg
agtttggtcattctgaagcatgcaagtctcttcttggatagttatacagagtattgcaca
tctattacaaatttcctggttatgggaggattccagcttcttgctaagcctgccattgat
ttcctaaataaaaaccaggagctgttacaagatttatcagaagtaaatgacgaaaacact
caattgatggaaatactgaatactctgtttttcctgccaatcagacgacttcataattat
gcaaaagttttgctaaagcttgctacttgttttgaagtgacatctccagaataccagaaa
ctgcaggattccagttcttgttatgagtctcttgctctccatctcggcaggaaaaggaag
gaagctgaatacacactgggcttctggaagacctttcctggaaaaatgacggattccttg
aggaagccagagcgtcgactgctgtgtgagagcagtaaccgagccctatctctgcagcat
gctgggaggttttctgtgaattggttcattctctttaatgatgccctagtccatgctcag
ttctccacacatcatgttttccctttggccacattatgggcagagccactttctgaagaa
gctggtggtgtgaatggcttaaagataactacacctgaggagcagttcactctcatttca
tcaacaccccaggaaaagactaagtggctacgggctataagccaagctgtggatcaggct
ttgagggggacatctgaccttccaccttatggaagtggcagtagtattcagaggcaggaa
ccacccatttcacgcagtgccaaatatactttctataaggatcctcgcctaaaggatgca
acctatgatggacgctggctttcagggaagccccatggcagaggggttttgaagtggcca
gatggaaagatgtattctggcatgttcaggaatggcttggaagatggatatggagaatat
agaatcccaaacaaagcactgaacaaagaagaccattatgtgggccattggaaagaagga
aaaatgtgtggtcaaggagtctatagttatgcctctggtgaagtgtttgaaggctgtttt
caagataacatgcgtcatggtcatggtctcctacggagtggaaaattgacttcctcttct
cccagtatgttcattggccaatgggtaatggataagaaagcaggatatggtgtctttgat
gatatcactaggggggaaaagtatatgggaatgtggcaagatgacgtatgtcaagggaat
ggtgtggtagttacccagtttggattatactatgaaggcaactttcaccttaataaaatg
atgggaaatggggttttactttccgaagatgatactatatatgagggagaattttcagat
gactggactcttaatggaaagggaacgctgactatgccaaatggagattacattgaaggt
tattttagtggagaatggggatctgggataaaaatcaccggaacttacttcaagcctagt
ctgtatgagagtgataaagacagacccaaagttttcaggaagctaggaaacctggcagtg
tcagctgatgagaaatggaaagcagtctttgatgaatgttggcgtcagctgggctgtgat
aacccaggccaaggggaagtttggaaagcatgggacaatattgctgtggccctgactacc
aatcggcgccaacacagagacagtccagagacattaagtcgttcacagactcaaacacta
gagagtttggaattcattcctcagcatgttggtgccttctctgtggagaaatatgatgac
atcaagaaatatttaataaaggcctgtgacactcctctgcaccccctgggcaggcttgtg
gagacactggttgcagtttatagaatgacatatgtgggtgtgggagccaatcgccggtta
ttgcaggaggctgtgaaggagattaagtcctaccttaagcgaattttccagctggtgaga
ttcttatttcctgagcttcctgaagagggcagcacaattcctctctctgctcctctgcca
accgaaaggaaatccttttgcactgggaaatcagattccagatctgaatctccagagcct
ggttatgtggtaacaagttctgggttactgcttcctgtactactacctcggctctaccca
ccactgtttatgctctatgccctggataatgatcgtgaggaagacatttactgggaatgt
gtactacgactaaataaacagccagatattgctcttctgggcttccttggggtgcagagg
aaattttggccaatgaccttgtcaatccttggagagagtaaaaaggttttgccaaccaca
aaagatgcttgttttgcctcagctgtagaatgtctacagcagattagcacgacatttacc
ccgtcagacaaacttaaggtcatccagcagacttttgaagagatctctcagagtgtcctg
gcatcacttcaggaagactttttatggtccatggatgacttgtttcctgttttcttatat
gtggtgctacgggccaggattaggaatttaggctccgaggtacacctcattgaggatctg
atggacccgtatcttcagcatggggaacagggtataatgttcaccaccttgaaggcgtgt
tactaccagatccagcgtgagaagcttaactag

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