Lynx rufus (bobcat): 124515899
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Entry
124515899 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124515899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124515899
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124515899
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
HECT type E3
124515899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
124515899
NCBI-ProteinID:
XP_046940916
LinkDB
All DBs
Position
Unknown
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVVVPQPEDPDRANPSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPNSAKKPKALQRTESPSETNKPHSKSKKRHLDQEQQLKSAHSPSTSKAHTRKS
GAAGSSRSQKRKRTESSCIKSGSVSESTGAEERSAKPTKLASKSAASAKAGCSSITDSSS
AASTSSSSSAVASASSAVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASASRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDETPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKAFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTSVSSGTATAATNAAADVGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVSNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcgataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcgtagttccacaaccagaggatccagacagagccaatccttcagaaaggcaa
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaactctcccaactctgccaaaaaaccgaaagcacttcagcgtact
gaatccccctcagaaacgaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacactcgccatcgacaagtaaggctcacaccagaaagagt
ggggccgctggcagttcacggagtcagaaaagaaagaggacagagagttcttgtataaag
agtggttctgtgtctgagtccactggtgccgaagagcgatctgcaaaacccaccaagctg
gcttcaaaatccgccgcctcggccaaggctgggtgcagctccatcactgattcttcctct
gccgcctctacttcctcctcctcttccgctgttgcctcggcctcctccgccgtgccacca
ggggccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcagcatcc
agtcccagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaattcgattgggctgctcgtttcagccctaaagttagccttcctaaaaccaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggcccttctggattacaggccaaa
ttggcaagtttaagaaaatctaccaagaagcgcagtgaatccccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtgccagtcggcgg
ggctctggcctgggcaaacgaggagcagctgaagctcgtcgacaggagaaaatggcggac
cctgaaagcaaccaggagacagtaaattcttcagctgcgcggacagacgaaaccccccag
ggagctgcagcttctagttctgttgcaggggctgtgggcatgaccacctctggggagagt
gaatccgatgattccgagatgggacgattacaagctttgttagaggccaggggtcttccc
cctcatctgtttggccctcttggtcctcggatgtcacagcttttccatagaacaattgga
agcggagctagctctaaggcccagcagcttctgcaaggactgcaggcgagtgatgaaagc
cagcaactccaggcggttatcgaaatgtgtcagttattggtcatgggaaatgaagagacg
ctgggagggtttcccgtcaagagtgtcgttcctgctttgataacattactgcagatggaa
cataatttcgatattatgaaccatgcttgtcgagccttaacatacatgatggaagcactt
cctcgatcatctgctgttgtcgtagatgcaattcccgtcttcttagaaaagctgcaggtt
attcagtgtattgatgtagcagagcaggccttgaccgccttggagatgttatcacgcaga
cacagtaaagccattctacaggcgggtggtttggcagactgcttgctgtatctagagttc
ttcagcataaatgcccaaagaaatgcactagcgatcgccgccaattgctgccagagtatc
acgccggatgaatttcattttgtggcagattccctcccgttgctcacccaaaggctaacc
catcaggacaaaaagtcggttgaaagcacttgcctttgttttgcacgtctggtggacaac
ttccaacatgaggagaatttactccagcaggttgcctccaaagatctgcttacaaatgtt
caacagctactggtagtgaccccaccaattttaagttctgggatgtttataatggtggtt
cgcatgttttctctgatgtgttccaactgtccgactttagctgttcaacttatgaagcaa
aatatcgcagaaacacttcacttcctcctgtgcggtgcctctaatgggagttgtcaggag
cagattgatcttgttccacgaagccctcaagaactgtacgagctgacatctctgatttgc
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgctgaagaag
ggaaatgcgcagaacacggatggtgcgatatggcagtggcgtgacgaccgtggcctttgg
catccctataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacactagcggatattccgagttaaagaaggatgatgctcgagcacagcttatg
aaagaggatccggaactggctaaggctttcattaagacgttattcggtgtcctttatgaa
gtgtatagttcctcggcaggacctgcggtcagacataagtgccttagagcaattcttagg
ataatttattttgcggatgctgaacttctgaaggatgtcctgaaaaatcatgctgtttca
agtcacattgcttccatgctgtcaagccaagacctgaagatagtagttggagcgcttcag
atggcagagatcttaatgcagaagttacctgatatttttagtgtttacttcagaagagaa
ggtgtaatgcatcaagtaaaacacttagcagaatcagagtctttgttgacaagtccacca
aaggcatgtacgaatgggtcaggatccttggggtccacgacgtcagtcagcagtggaaca
gccacggctgccactaatgctgcggctgacgtgggatcccccagcttgcagcacagcaga
gatgattctttagatctgagccctcaaggtcgattaagcgatgttctaaagagaaagcga
ctgccaaaacgagggccaagaaggccaaagtattcacctccaagagatgatgacaaagta
gacaatcaagctaaaagccccaccactactcagtcacctaaatcttctttcctggcaagc
ttgaatccaaaaacgtggggaaggttaagcgcacagtccaacagcaacaacattgaacca
gcacgaaccgcgggagtcagtggtcttgccagggctgcctcaaaggacaccatctccaat
aatagagaaaaaattaaaggttggattaaggaacaagcgcataaatttgtagaacgttac
ttcagttctgagaacatggatggaagcaaccctgcactgaatgtccttcagagactttgt
gctgcgaccgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtcagacgtttcatcatttgaaatccagcatagtggattcgtg
aagcagctgttgctttatttgacatctaaaagtgaaaaggatgctgtgagcagagagatc
agattaaagagattccttcatgtattcttttcttcaccacttcctggagaagagcccatt
ggaagagtagaaccagtgggtaatgcacctttgttggcattagttcacaagatgaacaac
tgcctcagccagatggaacagtttccagtcaaagtacatgacttccccagtgggaatggg
acaggaggcagcttttctctcaacagaggatcacaggctttaaaatttttcaacacccat
cagttaaaatgccagttacaaagacatccagactgtgcaaatgtgaaacagtggaagggt
gggcctgtcaagattgatcccctggctttggtacaagctatcgagagataccttgtggtc
agagggtatggaagagtaagagaagatgatgaagacagtgatgatgatggctctgatgag
gaaatagacgagtctctggccgctcagttcttaaattcaggaaatgtgagacaccggcta
cagttttacattggagaacacttgctcccgtataacatgactgtgtatcaggcagtccga
cagttcagcatacaggctgaagatgaaagggagtccacagacgatgagagcaatcctctg
ggaagagctggtatttggacaaagactcatacaatatggtacaaacccgtgcgagaggat
gaagaaagtaataaagattgtgttggtggtaaaagaggaagagcccaaacagctccaaca
aaaacatcccccagaaatgcaaaaaagcatgatgagttatggcacgatggagtgtgccca
tcggtatcaaatcctttagaagtttacctcatatccacgccacctgaaaatataactttt
gaagacccgtcattagatgtgattcttcttttaagagttctacatgccatcagtcgatac
tggtattacttgtatgataatgcaatgtgcaaggagattattccaactagtgaatttatt
aacagtaagttgacagcaaaagcaaacaggcagcttcaagatcctctagtgatcatgacc
ggaaacatcccaacgtggctgactgaactgggaaaaacctgcccatttttcttccctttt
gatacccggcaaatgcttttttatgtaactgcgtttgatcgggaccgagcgatgcagaga
ttacttgacaccaacccagaaatcaaccagtctgattctcaagatagcagagttgcacct
agattggatagaaaaaaacgtactgtgaacagagaggagctgctgaaacaagccgagtct
gtgatgcaggatctggggagctcgcgggccatgttagaaatccagtatgagaatgaggtt
ggtaccggtcttgggcctacactggagttttatgcacttgtatctcaggaactacagaga
gccgacttgggtctctggagaggtgaagaagtgactctcagcaatccaaaaggaagccaa
gaagggaccaagtacattcaaaacctccagggcctgtttgcgcttccctttggtaggacg
gctaagcccgctcatatcgcaaaggttaagatgaagtttcgcttcttaggcaaattaatg
gccaaggcgatcatggatttcagattggtggaccttccccttggcttacccttttataag
tggatgctacggcaagaaacttcactgacatcgcatgatttgtttgacattgacccggtt
gtagccagatcagtgtatcacctagaagatattgtcagacagaagaaaagacttgaacaa
gataaatcccagaccaaagagagtctacaatatgcattagaaaccctgactatgaacggc
tgctcagttgaagatctaggattggatttcactctgccaggatttcccaacatcgaactg
aagaaaggaggaaaggatataccggtcactatccacaatttagaagaatatttaagactg
gttatattctgggcactaaatgaaggcgtttctaggcaattcgattccttcagagatgga
tttgaatctgtcttcccactcagtcatctccagtacttctacccggaagaactggaccag
ctcttgtgcggcagtaaagcagacacttgggatgcaaagacactgatggagtgctgcagg
ccggaccacggttacactcatgacagtcgcgccgtgaagttcctgttcgagattctcagt
agttttgataacgagcagcagaggttatttctccagttcgtgaccggtagcccgagactg
cctgttggaggcttccggagtttgaatccacctttgacaattgtccggaagacgttcgaa
tcgacagaaaacccggatgacttcctgccctccgtaatgacttgtgtgaactatcttaag
ttgccggactactcgagcattgagatcatgcgtgagaaactgttgatcgcggccagagaa
ggacagcagtcgttccatctttcctga
DBGET
integrated database retrieval system
